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The map label for this gene is ftsY [H]

Identifier: 160903149

GI number: 160903149

Start: 1878222

End: 1879136

Strand: Direct

Name: ftsY [H]

Synonym: Pmob_1714

Alternate gene names: 160903149

Gene position: 1878222-1879136 (Clockwise)

Preceding gene: 160903148

Following gene: 160903150

Centisome position: 86.57

GC content: 37.16

Gene sequence:

>915_bases
ATGGGAATTTTTGAAAAGTTCAAAAATGGTTTAAGTAAGGCGAGAAACACCGTATTTAAAAATATCAAAACTATTTTTTC
TGGTAAAGTTCTCGACGATGATGTTTTGGAAGAATTGGAAGAGATTTTAATAATGTCTGATATGGGTGTTGAAGTTTCTC
ATAAAATTTTGGAAGAGTTAAAAAGTAGGTATAAAAGTAATAATTCTCACAATGACCCGCTATTATTATTGAGGGATATT
CTAGTGGAAAATTTACAGAAAGACGAAGTAGTTAGTGATTTTCAACAAAAACCCTATGTAATACTCATTGTTGGAGTAAA
CGGTAGCGGTAAAACGACAACTGCTGCCAAATTAGCAAAGATGTATTCTAAACAAGGTAAAGAAGTTGTTTTAGCTGCTG
CAGACACATTTAGGGCAGCAGCAATCGAACAACTCAAAGAGTGGGGTAATAGGTTAAATACCACCGTGATAGCTCACCAA
AAAGGTTCAGATGCCGCCGCTGTTGTGTATGACGCAATAACACATGCAAAGTCAAGAGGCAAAGATGTCGTGTTAGTGGA
CACCGCTGGGCGTTTACATACAAAAAGCAATTTAATGGATGAATTGAAAAAAATAAGGCGTGTGGTTGAAAGAGAAGTCC
CAGGAGCTCCGCATGAAACTCTGTTAGTTCTAGATGGAACGACTGGTCAAAACGGGATTTCACAGGCTAAGGCTTTTAAG
GAGGCTATAGACATAACGGGTATAGTTGTAACTAAATTAGATGGAACCGCCAAAGGGGGAATAGCTTTCGCTATAAACCA
TGAACTCAATATCCCAATAAAATTGGTGGGATTTGGAGAAAAAGAAGACGATTTACAAATTTTCGATCCGGTTTCTTATT
GCAATGCTTTATTAGGGGTTGACGAAGTAATATGA

Upstream 100 bases:

>100_bases
AAACTACTTTGTGATCAGCAAGTTACCTATGATTATAAAAGTCAGGTAAAACAGCTAATAATTCAAATAAACCTTTGATT
GATTTAATGGAGGTAGATGA

Downstream 100 bases:

>100_bases
AAGATTTTATTAGAGATTTTGCAGTCTGCCCAATATGTCAAAAAGAATTTTCTTTTGATAAAGTGGCCTCTACATCTATA
AAGGTAAGTTCTTATGATCT

Product: signal recognition particle-docking protein FtsY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 303

Protein sequence:

>304_residues
MGIFEKFKNGLSKARNTVFKNIKTIFSGKVLDDDVLEELEEILIMSDMGVEVSHKILEELKSRYKSNNSHNDPLLLLRDI
LVENLQKDEVVSDFQQKPYVILIVGVNGSGKTTTAAKLAKMYSKQGKEVVLAAADTFRAAAIEQLKEWGNRLNTTVIAHQ
KGSDAAAVVYDAITHAKSRGKDVVLVDTAGRLHTKSNLMDELKKIRRVVEREVPGAPHETLLVLDGTTGQNGISQAKAFK
EAIDITGIVVTKLDGTAKGGIAFAINHELNIPIKLVGFGEKEDDLQIFDPVSYCNALLGVDEVI

Sequences:

>Translated_304_residues
MGIFEKFKNGLSKARNTVFKNIKTIFSGKVLDDDVLEELEEILIMSDMGVEVSHKILEELKSRYKSNNSHNDPLLLLRDI
LVENLQKDEVVSDFQQKPYVILIVGVNGSGKTTTAAKLAKMYSKQGKEVVLAAADTFRAAAIEQLKEWGNRLNTTVIAHQ
KGSDAAAVVYDAITHAKSRGKDVVLVDTAGRLHTKSNLMDELKKIRRVVEREVPGAPHETLLVLDGTTGQNGISQAKAFK
EAIDITGIVVTKLDGTAKGGIAFAINHELNIPIKLVGFGEKEDDLQIFDPVSYCNALLGVDEVI
>Mature_303_residues
GIFEKFKNGLSKARNTVFKNIKTIFSGKVLDDDVLEELEEILIMSDMGVEVSHKILEELKSRYKSNNSHNDPLLLLRDIL
VENLQKDEVVSDFQQKPYVILIVGVNGSGKTTTAAKLAKMYSKQGKEVVLAAADTFRAAAIEQLKEWGNRLNTTVIAHQK
GSDAAAVVYDAITHAKSRGKDVVLVDTAGRLHTKSNLMDELKKIRRVVEREVPGAPHETLLVLDGTTGQNGISQAKAFKE
AIDITGIVVTKLDGTAKGGIAFAINHELNIPIKLVGFGEKEDDLQIFDPVSYCNALLGVDEVI

Specific function: Functional homolog of SRP receptor. Probably involved in the reception and insertion of a subset of proteins at the cytoplasmic membrane [H]

COG id: COG0552

COG function: function code U; Signal recognition particle GTPase

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Homo sapiens, GI4507215, Length=207, Percent_Identity=34.2995169082126, Blast_Score=133, Evalue=2e-31,
Organism=Homo sapiens, GI226371618, Length=207, Percent_Identity=34.2995169082126, Blast_Score=133, Evalue=2e-31,
Organism=Homo sapiens, GI295424842, Length=323, Percent_Identity=30.3405572755418, Blast_Score=110, Evalue=1e-24,
Organism=Homo sapiens, GI23308697, Length=323, Percent_Identity=30.3405572755418, Blast_Score=110, Evalue=1e-24,
Organism=Homo sapiens, GI89061728, Length=140, Percent_Identity=30.7142857142857, Blast_Score=82, Evalue=5e-16,
Organism=Escherichia coli, GI1789874, Length=301, Percent_Identity=47.8405315614618, Blast_Score=260, Evalue=7e-71,
Organism=Escherichia coli, GI1788963, Length=313, Percent_Identity=33.2268370607029, Blast_Score=164, Evalue=5e-42,
Organism=Caenorhabditis elegans, GI17539958, Length=204, Percent_Identity=32.843137254902, Blast_Score=133, Evalue=9e-32,
Organism=Caenorhabditis elegans, GI193206261, Length=298, Percent_Identity=31.2080536912752, Blast_Score=108, Evalue=2e-24,
Organism=Saccharomyces cerevisiae, GI6325345, Length=305, Percent_Identity=32.7868852459016, Blast_Score=157, Evalue=2e-39,
Organism=Saccharomyces cerevisiae, GI6320498, Length=252, Percent_Identity=29.3650793650794, Blast_Score=91, Evalue=2e-19,
Organism=Drosophila melanogaster, GI17647949, Length=215, Percent_Identity=35.3488372093023, Blast_Score=134, Evalue=7e-32,
Organism=Drosophila melanogaster, GI24641198, Length=236, Percent_Identity=32.6271186440678, Blast_Score=99, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004390
- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR013822 [H]

Pfam domain/function: PF00448 SRP54; PF02881 SRP54_N [H]

EC number: NA

Molecular weight: Translated: 33295; Mature: 33164

Theoretical pI: Translated: 6.41; Mature: 6.41

Prosite motif: PS00300 SRP54

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGIFEKFKNGLSKARNTVFKNIKTIFSGKVLDDDVLEELEEILIMSDMGVEVSHKILEEL
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHH
KSRYKSNNSHNDPLLLLRDILVENLQKDEVVSDFQQKPYVILIVGVNGSGKTTTAAKLAK
HHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHH
MYSKQGKEVVLAAADTFRAAAIEQLKEWGNRLNTTVIAHQKGSDAAAVVYDAITHAKSRG
HHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHCC
KDVVLVDTAGRLHTKSNLMDELKKIRRVVEREVPGAPHETLLVLDGTTGQNGISQAKAFK
CEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHH
EAIDITGIVVTKLDGTAKGGIAFAINHELNIPIKLVGFGEKEDDLQIFDPVSYCNALLGV
HHHHHCEEEEEECCCCCCCCEEEEEECCCCCCEEEEECCCCCCCCEEECHHHHHHHHHHH
DEVI
HHCC
>Mature Secondary Structure 
GIFEKFKNGLSKARNTVFKNIKTIFSGKVLDDDVLEELEEILIMSDMGVEVSHKILEEL
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHH
KSRYKSNNSHNDPLLLLRDILVENLQKDEVVSDFQQKPYVILIVGVNGSGKTTTAAKLAK
HHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHH
MYSKQGKEVVLAAADTFRAAAIEQLKEWGNRLNTTVIAHQKGSDAAAVVYDAITHAKSRG
HHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHCC
KDVVLVDTAGRLHTKSNLMDELKKIRRVVEREVPGAPHETLLVLDGTTGQNGISQAKAFK
CEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHH
EAIDITGIVVTKLDGTAKGGIAFAINHELNIPIKLVGFGEKEDDLQIFDPVSYCNALLGV
HHHHHCEEEEEECCCCCCCCEEEEEECCCCCCEEEEECCCCCCCCEEECHHHHHHHHHHH
DEVI
HHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10761919 [H]