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The map label for this gene is pepF [H]

Identifier: 160903129

GI number: 160903129

Start: 1850528

End: 1852282

Strand: Direct

Name: pepF [H]

Synonym: Pmob_1694

Alternate gene names: 160903129

Gene position: 1850528-1852282 (Clockwise)

Preceding gene: 160903128

Following gene: 160903130

Centisome position: 85.3

GC content: 34.64

Gene sequence:

>1755_bases
TTGTCTAGATGGGATTTAACATTTTTTTATTCCTCACCCGAAGACTCACAAATTAAAGAAGATTTCGAAGAAAGCTTAAG
GCAAATCAAAAAATTATATCAACAGTACTATGACAAACTGTCGAACCCTTCGCTGACTCCCCACGAATTGAAGAACTTTT
TCCAAGAGTTTGAGAAAGTTTTAAAAATGCATAATTTTACTTACCAGTATTGTCACTTGCTTTATGATTCCAACACCCAA
GACGAAACTGCTCAAAAACTCTATGCGATGGCTAAAGATTACGATTCAAAAATAGAAATGGAATCATCATTTTGGAAGCC
GAGGTTATTGAAGCAAAATGAAAAAAAGCTTAACGAATTGATGTATGCCGAGGAATTGAAAGATTACACCCATGTGCTTC
AAAAGCTTATTAAATCAAAAAGCCATATATTGAGTGAAGATGCTGAAAAGGTGTTAGCCGCTATGTACAACTCATCACGG
GGAGGCTTTGAAGAATTATATGGTCGGTTAACAAGTTCTTATACTTTCAAGTTAGAGATCGATGGTGAACTTAAAGAATT
AACCGATCCGCAAGTAAGGAGTTTAAGAAGAAAACCTGATGTAAATTTAAGACGACAAGCAATGAAAGAATTCTTTAAAA
AGTACGACGAAGATAGCCTCCTATTCGAAAAAATATACAATTCTATCGTAAAAAATTACGACACAGAGGCTAGTTTGAGG
AATTACAAAGAGCCGATTTCTATGAGAAACTTTAACAACGAAGTTGAAGATGAAATTGTGGAAACCGTTATAAAGGTCAC
AACTGACAGGACGCCCATGGTTCACCAATATTACAGATGGAAAGGTAAAAGGTTAGGGATAGAACAAACTCTTGCCGATA
TCTATGCGCCTTTGGCAAAAGTACAAAAAGAATATACTTTTGAAGAGGCACAGAAGATTGTTTTAGATTCGTATTACGAG
TTCGATGAAGAAATTGGAGAAATTGCAGAGTCTTTCTTTAAAGAAAAAAGAATAGATTCTGAAATAAGAAAAGGTAAAAG
AGGAGGAGCATACACATCTTACGCACTTCCTAATAGAAAACCTTTTATTTTATTAAATTTTACTGGGACCCTTGCCGATG
TGAGTACTTTAGCACATGAGTTGGGACATGGGATACATGGGACTTTAGCCTCAGACCAAAACATTTGGAATTATCACCCT
CCTTTAACGATGGCAGAAGTTGCATCTGTGTTTGGTGAGATGTTGGTGATTGATAAAATACTACCCACCCTTTCAGAAGC
GGAAAGAACGGCTTACCTGTCATCGAATGTTGAAGGAATGTTTTCGACGATGTTCAGACAAAATATGATTGCTAGATTTG
AAATATCATCTCACAATTTGATAGAACAAAATGGAAGTGCTAATTGGAAAGAACTTGCAGAACTGTATAAGAAAGAATTA
GAAATTATGTTTGGTGATTCAGTAATAATACCACAAGAGTATTATTATGAATGGGCAAGCATACCTCATATCTTTAGAAC
ACCTTTTTACGTTTATGCATACAATTTTGCTAATTTATTAGTTATAGCTTTATACCAACAATACAAAGTCGAAGGAAAAT
CTTTTGCACCAAAATACAAAGAGTTGCTTAGAAGTGGTGCAAAAGATTCCCCGAAAGAATTGTTGAAAAAAATTGGGATT
GATATCTCAAACCAAGATTTTTGGGAAAAAGGTTTCGAGTTTATAGAAAGGGAATTTATCAATAAATTAGATTGA

Upstream 100 bases:

>100_bases
TTGATAATGAACAAGAATTAATTGGCGCTATGGAAAAAGATGAAGACCAAGCTAGAAAGATCATACAGAAGCATTATATA
TAGAAGGGAGATGAAACGTT

Downstream 100 bases:

>100_bases
AGTAAAATAGAGACATTCAACACATTTTTAAATAATGTATTTAATCCGAGGGAGAATTTATCTTGGTTCCTAAAATTATT
ATAACTACGCATAAAAATGC

Product: peptidase M3A and M3B thimet/oligopeptidase F

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 584; Mature: 583

Protein sequence:

>584_residues
MSRWDLTFFYSSPEDSQIKEDFEESLRQIKKLYQQYYDKLSNPSLTPHELKNFFQEFEKVLKMHNFTYQYCHLLYDSNTQ
DETAQKLYAMAKDYDSKIEMESSFWKPRLLKQNEKKLNELMYAEELKDYTHVLQKLIKSKSHILSEDAEKVLAAMYNSSR
GGFEELYGRLTSSYTFKLEIDGELKELTDPQVRSLRRKPDVNLRRQAMKEFFKKYDEDSLLFEKIYNSIVKNYDTEASLR
NYKEPISMRNFNNEVEDEIVETVIKVTTDRTPMVHQYYRWKGKRLGIEQTLADIYAPLAKVQKEYTFEEAQKIVLDSYYE
FDEEIGEIAESFFKEKRIDSEIRKGKRGGAYTSYALPNRKPFILLNFTGTLADVSTLAHELGHGIHGTLASDQNIWNYHP
PLTMAEVASVFGEMLVIDKILPTLSEAERTAYLSSNVEGMFSTMFRQNMIARFEISSHNLIEQNGSANWKELAELYKKEL
EIMFGDSVIIPQEYYYEWASIPHIFRTPFYVYAYNFANLLVIALYQQYKVEGKSFAPKYKELLRSGAKDSPKELLKKIGI
DISNQDFWEKGFEFIEREFINKLD

Sequences:

>Translated_584_residues
MSRWDLTFFYSSPEDSQIKEDFEESLRQIKKLYQQYYDKLSNPSLTPHELKNFFQEFEKVLKMHNFTYQYCHLLYDSNTQ
DETAQKLYAMAKDYDSKIEMESSFWKPRLLKQNEKKLNELMYAEELKDYTHVLQKLIKSKSHILSEDAEKVLAAMYNSSR
GGFEELYGRLTSSYTFKLEIDGELKELTDPQVRSLRRKPDVNLRRQAMKEFFKKYDEDSLLFEKIYNSIVKNYDTEASLR
NYKEPISMRNFNNEVEDEIVETVIKVTTDRTPMVHQYYRWKGKRLGIEQTLADIYAPLAKVQKEYTFEEAQKIVLDSYYE
FDEEIGEIAESFFKEKRIDSEIRKGKRGGAYTSYALPNRKPFILLNFTGTLADVSTLAHELGHGIHGTLASDQNIWNYHP
PLTMAEVASVFGEMLVIDKILPTLSEAERTAYLSSNVEGMFSTMFRQNMIARFEISSHNLIEQNGSANWKELAELYKKEL
EIMFGDSVIIPQEYYYEWASIPHIFRTPFYVYAYNFANLLVIALYQQYKVEGKSFAPKYKELLRSGAKDSPKELLKKIGI
DISNQDFWEKGFEFIEREFINKLD
>Mature_583_residues
SRWDLTFFYSSPEDSQIKEDFEESLRQIKKLYQQYYDKLSNPSLTPHELKNFFQEFEKVLKMHNFTYQYCHLLYDSNTQD
ETAQKLYAMAKDYDSKIEMESSFWKPRLLKQNEKKLNELMYAEELKDYTHVLQKLIKSKSHILSEDAEKVLAAMYNSSRG
GFEELYGRLTSSYTFKLEIDGELKELTDPQVRSLRRKPDVNLRRQAMKEFFKKYDEDSLLFEKIYNSIVKNYDTEASLRN
YKEPISMRNFNNEVEDEIVETVIKVTTDRTPMVHQYYRWKGKRLGIEQTLADIYAPLAKVQKEYTFEEAQKIVLDSYYEF
DEEIGEIAESFFKEKRIDSEIRKGKRGGAYTSYALPNRKPFILLNFTGTLADVSTLAHELGHGIHGTLASDQNIWNYHPP
LTMAEVASVFGEMLVIDKILPTLSEAERTAYLSSNVEGMFSTMFRQNMIARFEISSHNLIEQNGSANWKELAELYKKELE
IMFGDSVIIPQEYYYEWASIPHIFRTPFYVYAYNFANLLVIALYQQYKVEGKSFAPKYKELLRSGAKDSPKELLKKIGID
ISNQDFWEKGFEFIEREFINKLD

Specific function: Unknown

COG id: COG1164

COG function: function code E; Oligoendopeptidase F

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M3B family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001567
- InterPro:   IPR004438
- InterPro:   IPR013647 [H]

Pfam domain/function: PF01432 Peptidase_M3; PF08439 Peptidase_M3_N [H]

EC number: NA

Molecular weight: Translated: 68846; Mature: 68715

Theoretical pI: Translated: 5.50; Mature: 5.50

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRWDLTFFYSSPEDSQIKEDFEESLRQIKKLYQQYYDKLSNPSLTPHELKNFFQEFEKV
CCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
LKMHNFTYQYCHLLYDSNTQDETAQKLYAMAKDYDSKIEMESSFWKPRLLKQNEKKLNEL
HHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCHHCCHHHHCCCCHHHHHHHHHHHHH
MYAEELKDYTHVLQKLIKSKSHILSEDAEKVLAAMYNSSRGGFEELYGRLTSSYTFKLEI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCEEEEEEE
DGELKELTDPQVRSLRRKPDVNLRRQAMKEFFKKYDEDSLLFEKIYNSIVKNYDTEASLR
CCCHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHH
NYKEPISMRNFNNEVEDEIVETVIKVTTDRTPMVHQYYRWKGKRLGIEQTLADIYAPLAK
HHHCCHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
VQKEYTFEEAQKIVLDSYYEFDEEIGEIAESFFKEKRIDSEIRKGKRGGAYTSYALPNRK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PFILLNFTGTLADVSTLAHELGHGIHGTLASDQNIWNYHPPLTMAEVASVFGEMLVIDKI
CEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
LPTLSEAERTAYLSSNVEGMFSTMFRQNMIARFEISSHNLIEQNGSANWKELAELYKKEL
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHEEECCCCCHHHCCCCCCHHHHHHHHHHHH
EIMFGDSVIIPQEYYYEWASIPHIFRTPFYVYAYNFANLLVIALYQQYKVEGKSFAPKYK
HHHCCCCEECCHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
ELLRSGAKDSPKELLKKIGIDISNQDFWEKGFEFIEREFINKLD
HHHHCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SRWDLTFFYSSPEDSQIKEDFEESLRQIKKLYQQYYDKLSNPSLTPHELKNFFQEFEKV
CCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
LKMHNFTYQYCHLLYDSNTQDETAQKLYAMAKDYDSKIEMESSFWKPRLLKQNEKKLNEL
HHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCHHCCHHHHCCCCHHHHHHHHHHHHH
MYAEELKDYTHVLQKLIKSKSHILSEDAEKVLAAMYNSSRGGFEELYGRLTSSYTFKLEI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCEEEEEEE
DGELKELTDPQVRSLRRKPDVNLRRQAMKEFFKKYDEDSLLFEKIYNSIVKNYDTEASLR
CCCHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHH
NYKEPISMRNFNNEVEDEIVETVIKVTTDRTPMVHQYYRWKGKRLGIEQTLADIYAPLAK
HHHCCHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
VQKEYTFEEAQKIVLDSYYEFDEEIGEIAESFFKEKRIDSEIRKGKRGGAYTSYALPNRK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PFILLNFTGTLADVSTLAHELGHGIHGTLASDQNIWNYHPPLTMAEVASVFGEMLVIDKI
CEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
LPTLSEAERTAYLSSNVEGMFSTMFRQNMIARFEISSHNLIEQNGSANWKELAELYKKEL
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHEEECCCCCHHHCCCCCCHHHHHHHHHHHH
EIMFGDSVIIPQEYYYEWASIPHIFRTPFYVYAYNFANLLVIALYQQYKVEGKSFAPKYK
HHHCCCCEECCHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
ELLRSGAKDSPKELLKKIGIDISNQDFWEKGFEFIEREFINKLD
HHHHCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9403685 [H]