Click here to switch to the map view.

The map label for this gene is ribF [H]

Identifier: 160903128

GI number: 160903128

Start: 1849620

End: 1850510

Strand: Direct

Name: ribF [H]

Synonym: Pmob_1693

Alternate gene names: 160903128

Gene position: 1849620-1850510 (Clockwise)

Preceding gene: 160903127

Following gene: 160903129

Centisome position: 85.25

GC content: 34.46

Gene sequence:

>891_bases
TTGTATGCACTCACAATTGGGATCTTTGATGGTGTACACAAGGGCCATCAGTATATATTGAAAAACACTCTCCAACTCGC
GAATAACTTAAGGTTTGAACCCTTGGTTTTGATGTTCAGATACCCTCCTGAAAAGCATCTAGGAGGGTTTGAAGGTCTCA
TTCTACCTAGTTGGCGAAGGAAACAAATTTGCGAAGATATTGGATTTAAAGTTGAAGTTAAAGATTTAGAAGAAGTATGG
GGATTACCCCATGAACAATATCTTGAGGAATTGATGAAAAAAGGAGTAAAAGCAATAGTTTGTGGTGAAGATTTTACTTT
TGGGAAAAATGCATTAGGCAATGTAGAATATTTACAAGCTGTTAGTCAAAGCAAAGGATTAGTAGTCAAAGTGCTGAAAG
ATTTAAAAAGTCAAGGAAACAGGGTTAGTTCTTCAGCTATAAAAAGAGAGTTAAAATTAGGTAATATTAAGACAGCAAAT
GGAATGCTTGGAAGGCCATGGACTCTTGAAGGTACAGTCTATGAAGATAGACATGTAGGATTTAAGCTTGGATTTCCAAC
TGCAAATATTAACGTTTGGGAAAAAGAGGAGATCTTATTGCCAAAATTTGGTGTTTACATTGTGAAAGGATATGTAAGAG
GTCGATCGGGTTTTTTGTGGGGCCTAATGAACGTTGGCTTAAGACCAACTTTTGATGAATACAAAAAGACTCCAAAAGTT
GAAGTCTATTTTTTGGATTTTTTTGGTGATCTATATGGTGATTATATAGTTTTAGAAGTAATAGATTTTTTACGAGATGA
AGTAAAATTTGATAATGAACAAGAATTAATTGGCGCTATGGAAAAAGATGAAGACCAAGCTAGAAAGATCATACAGAAGC
ATTATATATAG

Upstream 100 bases:

>100_bases
CTGAAAAAAAATCGACATTTTTAAGAACCCTTCTTAAAGAAGAAGAAAGGAACGATAGGATAGTAAAAATATATAAAATT
CTGTACGAGGTGACATAAAA

Downstream 100 bases:

>100_bases
AAGGGAGATGAAACGTTTTGTCTAGATGGGATTTAACATTTTTTTATTCCTCACCCGAAGACTCACAAATTAAAGAAGAT
TTCGAAGAAAGCTTAAGGCA

Product: riboflavin biosynthesis protein RibF

Products: NA

Alternate protein names: Riboflavin kinase; Flavokinase; FMN adenylyltransferase; FAD pyrophosphorylase; FAD synthase [H]

Number of amino acids: Translated: 296; Mature: 296

Protein sequence:

>296_residues
MYALTIGIFDGVHKGHQYILKNTLQLANNLRFEPLVLMFRYPPEKHLGGFEGLILPSWRRKQICEDIGFKVEVKDLEEVW
GLPHEQYLEELMKKGVKAIVCGEDFTFGKNALGNVEYLQAVSQSKGLVVKVLKDLKSQGNRVSSSAIKRELKLGNIKTAN
GMLGRPWTLEGTVYEDRHVGFKLGFPTANINVWEKEEILLPKFGVYIVKGYVRGRSGFLWGLMNVGLRPTFDEYKKTPKV
EVYFLDFFGDLYGDYIVLEVIDFLRDEVKFDNEQELIGAMEKDEDQARKIIQKHYI

Sequences:

>Translated_296_residues
MYALTIGIFDGVHKGHQYILKNTLQLANNLRFEPLVLMFRYPPEKHLGGFEGLILPSWRRKQICEDIGFKVEVKDLEEVW
GLPHEQYLEELMKKGVKAIVCGEDFTFGKNALGNVEYLQAVSQSKGLVVKVLKDLKSQGNRVSSSAIKRELKLGNIKTAN
GMLGRPWTLEGTVYEDRHVGFKLGFPTANINVWEKEEILLPKFGVYIVKGYVRGRSGFLWGLMNVGLRPTFDEYKKTPKV
EVYFLDFFGDLYGDYIVLEVIDFLRDEVKFDNEQELIGAMEKDEDQARKIIQKHYI
>Mature_296_residues
MYALTIGIFDGVHKGHQYILKNTLQLANNLRFEPLVLMFRYPPEKHLGGFEGLILPSWRRKQICEDIGFKVEVKDLEEVW
GLPHEQYLEELMKKGVKAIVCGEDFTFGKNALGNVEYLQAVSQSKGLVVKVLKDLKSQGNRVSSSAIKRELKLGNIKTAN
GMLGRPWTLEGTVYEDRHVGFKLGFPTANINVWEKEEILLPKFGVYIVKGYVRGRSGFLWGLMNVGLRPTFDEYKKTPKV
EVYFLDFFGDLYGDYIVLEVIDFLRDEVKFDNEQELIGAMEKDEDQARKIIQKHYI

Specific function: Unknown

COG id: COG0196

COG function: function code H; FAD synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribF family [H]

Homologues:

Organism=Escherichia coli, GI1786208, Length=296, Percent_Identity=30.4054054054054, Blast_Score=113, Evalue=1e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015864
- InterPro:   IPR015865
- InterPro:   IPR002606
- InterPro:   IPR014729 [H]

Pfam domain/function: PF06574 FAD_syn; PF01687 Flavokinase [H]

EC number: =2.7.1.26; =2.7.7.2 [H]

Molecular weight: Translated: 34048; Mature: 34048

Theoretical pI: Translated: 7.64; Mature: 7.64

Prosite motif: PS50132 RGS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYALTIGIFDGVHKGHQYILKNTLQLANNLRFEPLVLMFRYPPEKHLGGFEGLILPSWRR
CEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHCCCCCCEECCCHHH
KQICEDIGFKVEVKDLEEVWGLPHEQYLEELMKKGVKAIVCGEDFTFGKNALGNVEYLQA
HHHHHHCCCEEEEECHHHHHCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHH
VSQSKGLVVKVLKDLKSQGNRVSSSAIKRELKLGNIKTANGMLGRPWTLEGTVYEDRHVG
HHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEECCCCCCCCEEECCCEEECCCCE
FKLGFPTANINVWEKEEILLPKFGVYIVKGYVRGRSGFLWGLMNVGLRPTFDEYKKTPKV
EEECCCCCCCEECCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHCCCCCCHHHHHCCCCE
EVYFLDFFGDLYGDYIVLEVIDFLRDEVKFDNEQELIGAMEKDEDQARKIIQKHYI
EEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MYALTIGIFDGVHKGHQYILKNTLQLANNLRFEPLVLMFRYPPEKHLGGFEGLILPSWRR
CEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHCCCCCCEECCCHHH
KQICEDIGFKVEVKDLEEVWGLPHEQYLEELMKKGVKAIVCGEDFTFGKNALGNVEYLQA
HHHHHHCCCEEEEECHHHHHCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHH
VSQSKGLVVKVLKDLKSQGNRVSSSAIKRELKLGNIKTANGMLGRPWTLEGTVYEDRHVG
HHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEECCCCCCCCEEECCCEEECCCCE
FKLGFPTANINVWEKEEILLPKFGVYIVKGYVRGRSGFLWGLMNVGLRPTFDEYKKTPKV
EEECCCCCCCEECCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHCCCCCCHHHHHCCCCE
EVYFLDFFGDLYGDYIVLEVIDFLRDEVKFDNEQELIGAMEKDEDQARKIIQKHYI
EEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7772835; 3023344 [H]