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The map label for this gene is xylB [H]

Identifier: 160903045

GI number: 160903045

Start: 1754098

End: 1755618

Strand: Direct

Name: xylB [H]

Synonym: Pmob_1609

Alternate gene names: 160903045

Gene position: 1754098-1755618 (Clockwise)

Preceding gene: 160903044

Following gene: 160903046

Centisome position: 80.85

GC content: 36.23

Gene sequence:

>1521_bases
ATGTATTTAGTGGGAGTGGATATCGGAACTCAAAGCACTAAATCAGTTATCACGGATGAAAATGGAAAAGTCATTGCAGA
AGCTTCTAAAGAATATTCTGTTTTGACACCTCAACCCAATTGGGCTGAACAATGGCCTAATGTGTGGTTTGATGCTGTGA
TTGATACTCTGAAACTAGCAATAGAAAAAAGGAAAATAGATCCAAAAACCGTTGCAGGAATCGCTATCAGTGGATTATAT
GGAGGTTCGGGAATCCCGGTTGATAAAGATTTCAACCCTCTGAGGCCCTGCTTGATCTGGATGGATAGGAGAGCAACAAA
AGAAACAGATTGGGTTAAAAATAATGTTCCCAAAGAAACTTTATTTGGGATAACAGGTAATTATGTTGATAGTTACTTTG
GTTTCACAAAAATCATTTGGATAAAAAATAATGAGAAGGATATTTGGGAAAAAACTTATAAATTTATAACACCAAAAGAT
TTCGTCATTCACAAATTAACAGGTGAAGTAATAATAGATTTCTCTTCTGCTGGTAATATCGGAGGGATTTTCGACATTCA
TAAAAAATACTGGTCAGAAGAAATGTGCAAAATGCTTGGAATAGATTCAGATAAATTGCCTGAAAAGATAGTTAAATCTT
CTGAGATTGTAGGAACCCTCAACAAAACATATGCTCAAGAGATCGGACTTTTAGAGGGCACCCCGATAATCGCTGGAGGA
ATAGATGCACCCGTTGCTCAATTAAGTGCGGGATCTGTCAACGAAGGTGAACACGTAGCTATGGTTGGGACTTCGACATG
TTGGGGCAATATTCACGATGGCAAATACCTAACCCCTGAATTGGTTAGTTTTCCATATGTTGTAGATGATTTAGCAAAGA
TATACACGTTTGGGGGAGGAGCCACTTCGGGAGCCATAGTGAGATGGTTTCGAGAAGAGTTCGGGGAATATGAAAAAGAA
TTTGAAAGAAAAAGAGGTATTTCTGCTTATTCACTTCTTGAATTGGAATCAAAAGATATTCCTCCTGGAAGTGATGGGAT
TATAGTTTTGCCATATTTTATGGGTGAAAGATCACCTGTTTGGGAATCAAGTGCTAAAGGAACTATTATAGGACTTAACT
TGTACCACAAAAGAAGACATCTTTACAAAGCTTTTATGGAGTCTGTAGCCTATTCCCTGAGACATAATATGGAATATGCA
GAAAATACTGGAATGAAATTGAATTCCGAATGTTACTTAGTAGGAGGAGCTGCTAAGAGTGATATTTGGACTCAAATATT
TGCAGATGTGACAGGATATATTATGAAAAGAACGGATCAAGATGTTGAAGCACCTTTAGGAGATGCATTTTTAGCTGGCT
TAGGAACAGGTGTATTTCCCGATTCACAAGATATTAAGAAATGGATAAAGTTCAAAGAAAATACTTCCCCAGACGTTAAT
AACAAAAGTGTTTATGATAAATACTTCAATTTATACAAAAAGTTGTATGAAAATACCAAAGAAATAATGAAACAATTATA
G

Upstream 100 bases:

>100_bases
TATGGAAATTATATAGATGAGTTGGTACATTTTTGTAAGATTAAAAATATCGGTTATCAGATTTTGGATTGAAAAAAATT
TATATTTGGAGGAACTAAAA

Downstream 100 bases:

>100_bases
TCTCATTGATTGAAAAAATTTACCGGTATGGAGTAGCAAAAATCAAGAAAAGGCAACGGATAGAATTTATAGCCCCTTTA
TGGGGCTTAATTTTTTTTGT

Product: xylulokinase

Products: NA

Alternate protein names: Xylulokinase [H]

Number of amino acids: Translated: 506; Mature: 506

Protein sequence:

>506_residues
MYLVGVDIGTQSTKSVITDENGKVIAEASKEYSVLTPQPNWAEQWPNVWFDAVIDTLKLAIEKRKIDPKTVAGIAISGLY
GGSGIPVDKDFNPLRPCLIWMDRRATKETDWVKNNVPKETLFGITGNYVDSYFGFTKIIWIKNNEKDIWEKTYKFITPKD
FVIHKLTGEVIIDFSSAGNIGGIFDIHKKYWSEEMCKMLGIDSDKLPEKIVKSSEIVGTLNKTYAQEIGLLEGTPIIAGG
IDAPVAQLSAGSVNEGEHVAMVGTSTCWGNIHDGKYLTPELVSFPYVVDDLAKIYTFGGGATSGAIVRWFREEFGEYEKE
FERKRGISAYSLLELESKDIPPGSDGIIVLPYFMGERSPVWESSAKGTIIGLNLYHKRRHLYKAFMESVAYSLRHNMEYA
ENTGMKLNSECYLVGGAAKSDIWTQIFADVTGYIMKRTDQDVEAPLGDAFLAGLGTGVFPDSQDIKKWIKFKENTSPDVN
NKSVYDKYFNLYKKLYENTKEIMKQL

Sequences:

>Translated_506_residues
MYLVGVDIGTQSTKSVITDENGKVIAEASKEYSVLTPQPNWAEQWPNVWFDAVIDTLKLAIEKRKIDPKTVAGIAISGLY
GGSGIPVDKDFNPLRPCLIWMDRRATKETDWVKNNVPKETLFGITGNYVDSYFGFTKIIWIKNNEKDIWEKTYKFITPKD
FVIHKLTGEVIIDFSSAGNIGGIFDIHKKYWSEEMCKMLGIDSDKLPEKIVKSSEIVGTLNKTYAQEIGLLEGTPIIAGG
IDAPVAQLSAGSVNEGEHVAMVGTSTCWGNIHDGKYLTPELVSFPYVVDDLAKIYTFGGGATSGAIVRWFREEFGEYEKE
FERKRGISAYSLLELESKDIPPGSDGIIVLPYFMGERSPVWESSAKGTIIGLNLYHKRRHLYKAFMESVAYSLRHNMEYA
ENTGMKLNSECYLVGGAAKSDIWTQIFADVTGYIMKRTDQDVEAPLGDAFLAGLGTGVFPDSQDIKKWIKFKENTSPDVN
NKSVYDKYFNLYKKLYENTKEIMKQL
>Mature_506_residues
MYLVGVDIGTQSTKSVITDENGKVIAEASKEYSVLTPQPNWAEQWPNVWFDAVIDTLKLAIEKRKIDPKTVAGIAISGLY
GGSGIPVDKDFNPLRPCLIWMDRRATKETDWVKNNVPKETLFGITGNYVDSYFGFTKIIWIKNNEKDIWEKTYKFITPKD
FVIHKLTGEVIIDFSSAGNIGGIFDIHKKYWSEEMCKMLGIDSDKLPEKIVKSSEIVGTLNKTYAQEIGLLEGTPIIAGG
IDAPVAQLSAGSVNEGEHVAMVGTSTCWGNIHDGKYLTPELVSFPYVVDDLAKIYTFGGGATSGAIVRWFREEFGEYEKE
FERKRGISAYSLLELESKDIPPGSDGIIVLPYFMGERSPVWESSAKGTIIGLNLYHKRRHLYKAFMESVAYSLRHNMEYA
ENTGMKLNSECYLVGGAAKSDIWTQIFADVTGYIMKRTDQDVEAPLGDAFLAGLGTGVFPDSQDIKKWIKFKENTSPDVN
NKSVYDKYFNLYKKLYENTKEIMKQL

Specific function: Unknown

COG id: COG1070

COG function: function code G; Sugar (pentulose and hexulose) kinases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FGGY kinase family [H]

Homologues:

Organism=Homo sapiens, GI164663828, Length=547, Percent_Identity=27.4223034734918, Blast_Score=146, Evalue=3e-35,
Organism=Homo sapiens, GI164663830, Length=571, Percent_Identity=26.2697022767075, Blast_Score=133, Evalue=5e-31,
Organism=Homo sapiens, GI42794763, Length=451, Percent_Identity=26.1640798226164, Blast_Score=120, Evalue=2e-27,
Organism=Homo sapiens, GI4504007, Length=451, Percent_Identity=26.1640798226164, Blast_Score=114, Evalue=2e-25,
Organism=Homo sapiens, GI189409120, Length=451, Percent_Identity=26.1640798226164, Blast_Score=114, Evalue=3e-25,
Organism=Homo sapiens, GI41393575, Length=451, Percent_Identity=25.4988913525499, Blast_Score=112, Evalue=1e-24,
Organism=Homo sapiens, GI88196792, Length=495, Percent_Identity=23.030303030303, Blast_Score=89, Evalue=9e-18,
Organism=Escherichia coli, GI1789987, Length=504, Percent_Identity=26.3888888888889, Blast_Score=193, Evalue=2e-50,
Organism=Escherichia coli, GI1787789, Length=517, Percent_Identity=24.7582205029014, Blast_Score=157, Evalue=1e-39,
Organism=Escherichia coli, GI1789168, Length=477, Percent_Identity=25.3668763102725, Blast_Score=152, Evalue=6e-38,
Organism=Escherichia coli, GI1790361, Length=500, Percent_Identity=25.4, Blast_Score=145, Evalue=6e-36,
Organism=Escherichia coli, GI1789138, Length=523, Percent_Identity=24.282982791587, Blast_Score=128, Evalue=9e-31,
Organism=Escherichia coli, GI1790005, Length=508, Percent_Identity=23.4251968503937, Blast_Score=126, Evalue=4e-30,
Organism=Escherichia coli, GI1786249, Length=558, Percent_Identity=23.6559139784946, Blast_Score=78, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17535599, Length=452, Percent_Identity=25.2212389380531, Blast_Score=123, Evalue=3e-28,
Organism=Saccharomyces cerevisiae, GI6320314, Length=565, Percent_Identity=23.8938053097345, Blast_Score=92, Evalue=1e-19,
Organism=Drosophila melanogaster, GI24657106, Length=553, Percent_Identity=22.2423146473779, Blast_Score=107, Evalue=2e-23,
Organism=Drosophila melanogaster, GI24657102, Length=553, Percent_Identity=22.2423146473779, Blast_Score=107, Evalue=2e-23,
Organism=Drosophila melanogaster, GI24656367, Length=500, Percent_Identity=21.6, Blast_Score=91, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000577
- InterPro:   IPR018485
- InterPro:   IPR018483
- InterPro:   IPR018484
- InterPro:   IPR006000 [H]

Pfam domain/function: PF02782 FGGY_C; PF00370 FGGY_N [H]

EC number: =2.7.1.17 [H]

Molecular weight: Translated: 56782; Mature: 56782

Theoretical pI: Translated: 5.43; Mature: 5.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYLVGVDIGTQSTKSVITDENGKVIAEASKEYSVLTPQPNWAEQWPNVWFDAVIDTLKLA
CEEEEEECCCCCCHHHEECCCCCEEEECCCCCEEECCCCCHHHHCCCHHHHHHHHHHHHH
IEKRKIDPKTVAGIAISGLYGGSGIPVDKDFNPLRPCLIWMDRRATKETDWVKNNVPKET
HHHHCCCCHHHHHEEEEEEECCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHCCCCHHH
LFGITGNYVDSYFGFTKIIWIKNNEKDIWEKTYKFITPKDFVIHKLTGEVIIDFSSAGNI
HHCCCCHHHHHHCCCEEEEEEECCCHHHHHHHHHHCCCCHHEEEEECCEEEEEECCCCCC
GGIFDIHKKYWSEEMCKMLGIDSDKLPEKIVKSSEIVGTLNKTYAQEIGLLEGTPIIAGG
CCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECC
IDAPVAQLSAGSVNEGEHVAMVGTSTCWGNIHDGKYLTPELVSFPYVVDDLAKIYTFGGG
CCCCHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHCCCCC
ATSGAIVRWFREEFGEYEKEFERKRGISAYSLLELESKDIPPGSDGIIVLPYFMGERSPV
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCCC
WESSAKGTIIGLNLYHKRRHLYKAFMESVAYSLRHNMEYAENTGMKLNSECYLVGGAAKS
CCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCEECCCEEEEECCCCH
DIWTQIFADVTGYIMKRTDQDVEAPLGDAFLAGLGTGVFPDSQDIKKWIKFKENTSPDVN
HHHHHHHHHHHHHHHHCCCCHHCCCCHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCC
NKSVYDKYFNLYKKLYENTKEIMKQL
CCHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MYLVGVDIGTQSTKSVITDENGKVIAEASKEYSVLTPQPNWAEQWPNVWFDAVIDTLKLA
CEEEEEECCCCCCHHHEECCCCCEEEECCCCCEEECCCCCHHHHCCCHHHHHHHHHHHHH
IEKRKIDPKTVAGIAISGLYGGSGIPVDKDFNPLRPCLIWMDRRATKETDWVKNNVPKET
HHHHCCCCHHHHHEEEEEEECCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHCCCCHHH
LFGITGNYVDSYFGFTKIIWIKNNEKDIWEKTYKFITPKDFVIHKLTGEVIIDFSSAGNI
HHCCCCHHHHHHCCCEEEEEEECCCHHHHHHHHHHCCCCHHEEEEECCEEEEEECCCCCC
GGIFDIHKKYWSEEMCKMLGIDSDKLPEKIVKSSEIVGTLNKTYAQEIGLLEGTPIIAGG
CCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECC
IDAPVAQLSAGSVNEGEHVAMVGTSTCWGNIHDGKYLTPELVSFPYVVDDLAKIYTFGGG
CCCCHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHCCCCC
ATSGAIVRWFREEFGEYEKEFERKRGISAYSLLELESKDIPPGSDGIIVLPYFMGERSPV
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCCC
WESSAKGTIIGLNLYHKRRHLYKAFMESVAYSLRHNMEYAENTGMKLNSECYLVGGAAKS
CCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCEECCCEEEEECCCCH
DIWTQIFADVTGYIMKRTDQDVEAPLGDAFLAGLGTGVFPDSQDIKKWIKFKENTSPDVN
HHHHHHHHHHHHHHHHCCCCHHCCCCHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCC
NKSVYDKYFNLYKKLYENTKEIMKQL
CCHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377; 2994009 [H]