Click here to switch to the map view.

The map label for this gene is fucI [H]

Identifier: 160903044

GI number: 160903044

Start: 1752654

End: 1754069

Strand: Direct

Name: fucI [H]

Synonym: Pmob_1608

Alternate gene names: 160903044

Gene position: 1752654-1754069 (Clockwise)

Preceding gene: 160903043

Following gene: 160903045

Centisome position: 80.78

GC content: 37.5

Gene sequence:

>1416_bases
ATGCAAAAAAGGAAAGTAGGAATAATCACATTTTCAGACGGTAGAGATTTTGTTCATGAGGAAACCTTGGAGATGAACAA
AAAATTTGAAGACAGGCTAGTAAAAGCGTTAGAAAATACTGGTGAAGTGGAAGTAGTAAGAGCTTCAGACATTGTAAACA
AACCATCCAAAGCCAAAAAAGCTGGAAAAGAAATGCTAAAGGCAGAAGTGGAAATGACGATCTTCAATTATTCTATATGG
TGTTGGCCTCACTTAAGTGTTATGGCTTCACTTTATGCCCCTGGACCGTATTTAACTTATGGCCAAATAAATCCAAAGTA
TCCTGGAATGGTAGGATTGTTAGCTGCAGCTGGTGCTTTAGAGCAAATAGGAATATTCCCAGAAAGAGTTTGGGGTGAGC
CAGAAGATCCGACGGTTTTAGAAAAATTACTAAAATACATACGTGCTGCCAGTGCTGCACATAGGTTAAAAGGAGAAAGG
TATGGAATGTTTGGTGGAAGACCCATGGGAATGTACACTGCTTCTGCCAACGGAGATCAATGGATGAAAGAATTTGGAAT
CGATGTTGAACAAGTAGACCAATATGCATTAGTTTTAAAAGCTGAACAAGTACCATCCCAGAAAAAAAAGAAAGCAAGAG
AATGGCTTGAAAAATTGGCAACCGTTAAATATGACGGCAAAAGACTCACCCCTGAAATTTTAGAGAAACAGATAGGATTA
TATTACGCTGCACTTGAAATTATAAAAGAAGAAGAGCTTGATTTTGTTGGATTCAAGGGACAACCTGAAATGACAAATAA
TTATGCAACATTAGATATCGCAGAAGCTTTTTTGAACGATCCATACGATTTTGATGGTGCAAAGGAACCTATTGTTGCAG
CAACCGAAACAGATATGGATGGAGCTTTAACGATGGAAATCTTTAAACATATAGCCCAAACCCCTGTACTGTTTGCTGAT
GTGAGGCATTACTTCAAAGAAGAGAATTTATTGGATTTAGCAAACTCTGGACAGCATGCGACATATTTTGCAGGAAAATC
TAACAAACCTGAAGAAAATTTGAAAAACGTGATTATACACCCTGAAGATTTTTATTTTCCAGCGGGTGGTGGTGCTGTTA
AACACTTTGCAGCCCCTGGAAGAGTCACATTAGCAAGACTTGCAAGACAAGATGGAAATTATGTAATGACGATAGTTCCC
GCTGAGTTTGTCGAACTTTCTGAGGAAGAAAAGAAAAGATTGAGCGAACAAGTGCAAATCGAATGGCCACATGCATATGC
TAAACTAGATACTGATATGGAAACTTTTTTGGAATATTATCCTTGCAACCATACACATGGGGTATATGGAAATTATATAG
ATGAGTTGGTACATTTTTGTAAGATTAAAAATATCGGTTATCAGATTTTGGATTGA

Upstream 100 bases:

>100_bases
GATTGGTTGAAAGTTTTAAGATATAGAAGGGACCAAGCTTAAAACAAATTTTTGATGTTTTAAAAATAATAAATATAAAC
TAAGAGGAGGTTATTTTTAT

Downstream 100 bases:

>100_bases
AAAAAATTTATATTTGGAGGAACTAAAAATGTATTTAGTGGGAGTGGATATCGGAACTCAAAGCACTAAATCAGTTATCA
CGGATGAAAATGGAAAAGTC

Product: L-fucose isomerase-like protein

Products: NA

Alternate protein names: 6-deoxy-L-galactose isomerase; FucIase [H]

Number of amino acids: Translated: 471; Mature: 471

Protein sequence:

>471_residues
MQKRKVGIITFSDGRDFVHEETLEMNKKFEDRLVKALENTGEVEVVRASDIVNKPSKAKKAGKEMLKAEVEMTIFNYSIW
CWPHLSVMASLYAPGPYLTYGQINPKYPGMVGLLAAAGALEQIGIFPERVWGEPEDPTVLEKLLKYIRAASAAHRLKGER
YGMFGGRPMGMYTASANGDQWMKEFGIDVEQVDQYALVLKAEQVPSQKKKKAREWLEKLATVKYDGKRLTPEILEKQIGL
YYAALEIIKEEELDFVGFKGQPEMTNNYATLDIAEAFLNDPYDFDGAKEPIVAATETDMDGALTMEIFKHIAQTPVLFAD
VRHYFKEENLLDLANSGQHATYFAGKSNKPEENLKNVIIHPEDFYFPAGGGAVKHFAAPGRVTLARLARQDGNYVMTIVP
AEFVELSEEEKKRLSEQVQIEWPHAYAKLDTDMETFLEYYPCNHTHGVYGNYIDELVHFCKIKNIGYQILD

Sequences:

>Translated_471_residues
MQKRKVGIITFSDGRDFVHEETLEMNKKFEDRLVKALENTGEVEVVRASDIVNKPSKAKKAGKEMLKAEVEMTIFNYSIW
CWPHLSVMASLYAPGPYLTYGQINPKYPGMVGLLAAAGALEQIGIFPERVWGEPEDPTVLEKLLKYIRAASAAHRLKGER
YGMFGGRPMGMYTASANGDQWMKEFGIDVEQVDQYALVLKAEQVPSQKKKKAREWLEKLATVKYDGKRLTPEILEKQIGL
YYAALEIIKEEELDFVGFKGQPEMTNNYATLDIAEAFLNDPYDFDGAKEPIVAATETDMDGALTMEIFKHIAQTPVLFAD
VRHYFKEENLLDLANSGQHATYFAGKSNKPEENLKNVIIHPEDFYFPAGGGAVKHFAAPGRVTLARLARQDGNYVMTIVP
AEFVELSEEEKKRLSEQVQIEWPHAYAKLDTDMETFLEYYPCNHTHGVYGNYIDELVHFCKIKNIGYQILD
>Mature_471_residues
MQKRKVGIITFSDGRDFVHEETLEMNKKFEDRLVKALENTGEVEVVRASDIVNKPSKAKKAGKEMLKAEVEMTIFNYSIW
CWPHLSVMASLYAPGPYLTYGQINPKYPGMVGLLAAAGALEQIGIFPERVWGEPEDPTVLEKLLKYIRAASAAHRLKGER
YGMFGGRPMGMYTASANGDQWMKEFGIDVEQVDQYALVLKAEQVPSQKKKKAREWLEKLATVKYDGKRLTPEILEKQIGL
YYAALEIIKEEELDFVGFKGQPEMTNNYATLDIAEAFLNDPYDFDGAKEPIVAATETDMDGALTMEIFKHIAQTPVLFAD
VRHYFKEENLLDLANSGQHATYFAGKSNKPEENLKNVIIHPEDFYFPAGGGAVKHFAAPGRVTLARLARQDGNYVMTIVP
AEFVELSEEEKKRLSEQVQIEWPHAYAKLDTDMETFLEYYPCNHTHGVYGNYIDELVHFCKIKNIGYQILD

Specific function: Converts the aldose L-fucose into the corresponding ketose L-fuculose [H]

COG id: COG2407

COG function: function code G; L-fucose isomerase and related proteins

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the L-fucose isomerase family [H]

Homologues:

Organism=Escherichia coli, GI1789167, Length=523, Percent_Identity=24.0917782026769, Blast_Score=95, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015888
- InterPro:   IPR004216
- InterPro:   IPR012888
- InterPro:   IPR005763
- InterPro:   IPR009015
- InterPro:   IPR012889 [H]

Pfam domain/function: PF02952 Fucose_iso_C; PF07881 Fucose_iso_N1; PF07882 Fucose_iso_N2 [H]

EC number: =5.3.1.25 [H]

Molecular weight: Translated: 53384; Mature: 53384

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKRKVGIITFSDGRDFVHEETLEMNKKFEDRLVKALENTGEVEVVRASDIVNKPSKAKK
CCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHCCCHHHHH
AGKEMLKAEVEMTIFNYSIWCWPHLSVMASLYAPGPYLTYGQINPKYPGMVGLLAAAGAL
HHHHHHHHHHEEEEEEEEEEECHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHH
EQIGIFPERVWGEPEDPTVLEKLLKYIRAASAAHRLKGERYGMFGGRPMGMYTASANGDQ
HHHCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCHHH
WMKEFGIDVEQVDQYALVLKAEQVPSQKKKKAREWLEKLATVKYDGKRLTPEILEKQIGL
HHHHHCCCHHHHHHHHHEEEHHHCCCHHHHHHHHHHHHHHCEECCCCCCCHHHHHHHHHH
YYAALEIIKEEELDFVGFKGQPEMTNNYATLDIAEAFLNDPYDFDGAKEPIVAATETDMD
HHHHHHHHHHCCCCEECCCCCCCCCCCEEHHHHHHHHCCCCCCCCCCCCCEEEEECCCCC
GALTMEIFKHIAQTPVLFADVRHYFKEENLLDLANSGQHATYFAGKSNKPEENLKNVIIH
CHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHCCCCCEEEECCCCCCCHHHHCCEEEC
PEDFYFPAGGGAVKHFAAPGRVTLARLARQDGNYVMTIVPAEFVELSEEEKKRLSEQVQI
CCCCEECCCCCCHHHHCCCCHHHHHHHHHCCCCEEEEECCHHHHHCCHHHHHHHHHHEEE
EWPHAYAKLDTDMETFLEYYPCNHTHGVYGNYIDELVHFCKIKNIGYQILD
ECCHHHHHCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCEECC
>Mature Secondary Structure
MQKRKVGIITFSDGRDFVHEETLEMNKKFEDRLVKALENTGEVEVVRASDIVNKPSKAKK
CCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHCCCHHHHH
AGKEMLKAEVEMTIFNYSIWCWPHLSVMASLYAPGPYLTYGQINPKYPGMVGLLAAAGAL
HHHHHHHHHHEEEEEEEEEEECHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHH
EQIGIFPERVWGEPEDPTVLEKLLKYIRAASAAHRLKGERYGMFGGRPMGMYTASANGDQ
HHHCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCHHH
WMKEFGIDVEQVDQYALVLKAEQVPSQKKKKAREWLEKLATVKYDGKRLTPEILEKQIGL
HHHHHCCCHHHHHHHHHEEEHHHCCCHHHHHHHHHHHHHHCEECCCCCCCHHHHHHHHHH
YYAALEIIKEEELDFVGFKGQPEMTNNYATLDIAEAFLNDPYDFDGAKEPIVAATETDMD
HHHHHHHHHHCCCCEECCCCCCCCCCCEEHHHHHHHHCCCCCCCCCCCCCEEEEECCCCC
GALTMEIFKHIAQTPVLFADVRHYFKEENLLDLANSGQHATYFAGKSNKPEENLKNVIIH
CHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHCCCCCEEEECCCCCCCHHHHCCEEEC
PEDFYFPAGGGAVKHFAAPGRVTLARLARQDGNYVMTIVPAEFVELSEEEKKRLSEQVQI
CCCCEECCCCCCHHHHCCCCHHHHHHHHHCCCCEEEEECCHHHHHCCHHHHHHHHHHEEE
EWPHAYAKLDTDMETFLEYYPCNHTHGVYGNYIDELVHFCKIKNIGYQILD
ECCHHHHHCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA