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The map label for this gene is fucU [H]

Identifier: 160903039

GI number: 160903039

Start: 1747293

End: 1747715

Strand: Direct

Name: fucU [H]

Synonym: Pmob_1603

Alternate gene names: 160903039

Gene position: 1747293-1747715 (Clockwise)

Preceding gene: 160903038

Following gene: 160903040

Centisome position: 80.54

GC content: 30.97

Gene sequence:

>423_bases
ATGTTAAAAAACATACCTAAGATAATATCTCCAGAATTAATGAAAGTCCTATTAGAAATGGGACATGGGGATGAAATATT
GTTGGCTGATGGAAATTATCCCTGCCATTCGGTGGGAGTCAAAGTAGTAAGATTAGATGGACATGGAATTCCAGAAATTT
TAAAAGCTATCTTAAAATATTTTCCTCTTGATACTTTTGTTGAAGAAAACGTTCTGTTAATGGATAATAATTTAAGTACT
AAACCTGAAATTTGGAAAAGTTACGAAGAAATATTGTATGATTCTAAAGAAGACTTTAGAGTGAAAGTGTTAGAAAGATT
TAAATTTTATGAAAGAGCTAAAAACGTATTCGCCATAGTTGCGACAAGTGAAAGTGCCTTGTATGCTAATATCATTCTTA
AAAAAGGGGTTGTCAAAACATGA

Upstream 100 bases:

>100_bases
GGCAAAGAATAATAGTAGGAATTATTCTAGTGATAACTGTTTCGATTGATCAAATGCGTTCCAGAAGAGGATAATAAAGT
GAATTCGTGAGGTGATTTTT

Downstream 100 bases:

>100_bases
TATATATAGACTCGATTAATGAAAAAGCTATTTCATTTTTAAATTTTCCTTTTATTCAGGGGTTGACTACAAATCCTTCC
ATAATAAAAAAGGAGACTAA

Product: RbsD or FucU transport

Products: NA

Alternate protein names: Fucose 1-epimerase; Type-2 mutarotase [H]

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MLKNIPKIISPELMKVLLEMGHGDEILLADGNYPCHSVGVKVVRLDGHGIPEILKAILKYFPLDTFVEENVLLMDNNLST
KPEIWKSYEEILYDSKEDFRVKVLERFKFYERAKNVFAIVATSESALYANIILKKGVVKT

Sequences:

>Translated_140_residues
MLKNIPKIISPELMKVLLEMGHGDEILLADGNYPCHSVGVKVVRLDGHGIPEILKAILKYFPLDTFVEENVLLMDNNLST
KPEIWKSYEEILYDSKEDFRVKVLERFKFYERAKNVFAIVATSESALYANIILKKGVVKT
>Mature_140_residues
MLKNIPKIISPELMKVLLEMGHGDEILLADGNYPCHSVGVKVVRLDGHGIPEILKAILKYFPLDTFVEENVLLMDNNLST
KPEIWKSYEEILYDSKEDFRVKVLERFKFYERAKNVFAIVATSESALYANIILKKGVVKT

Specific function: Involved in the anomeric conversion of L-fucose [H]

COG id: COG4154

COG function: function code G; Fucose dissimilation pathway protein FucU

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rbsD / fucU family. FucU mutarotase subfamily [H]

Homologues:

Organism=Homo sapiens, GI148596947, Length=145, Percent_Identity=47.5862068965517, Blast_Score=137, Evalue=3e-33,
Organism=Homo sapiens, GI148596951, Length=130, Percent_Identity=45.3846153846154, Blast_Score=116, Evalue=8e-27,
Organism=Escherichia coli, GI1789169, Length=139, Percent_Identity=45.3237410071942, Blast_Score=121, Evalue=2e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007721 [H]

Pfam domain/function: PF05025 RbsD_FucU [H]

EC number: NA

Molecular weight: Translated: 16000; Mature: 16000

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKNIPKIISPELMKVLLEMGHGDEILLADGNYPCHSVGVKVVRLDGHGIPEILKAILKY
CCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCHHHHCEEEEEECCCCHHHHHHHHHHH
FPLDTFVEENVLLMDNNLSTKPEIWKSYEEILYDSKEDFRVKVLERFKFYERAKNVFAIV
CCCCHHHCCCEEEECCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCEEEEE
ATSESALYANIILKKGVVKT
EECCCHHHHHHHHHCCCCCC
>Mature Secondary Structure
MLKNIPKIISPELMKVLLEMGHGDEILLADGNYPCHSVGVKVVRLDGHGIPEILKAILKY
CCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCHHHHCEEEEEECCCCHHHHHHHHHHH
FPLDTFVEENVLLMDNNLSTKPEIWKSYEEILYDSKEDFRVKVLERFKFYERAKNVFAIV
CCCCHHHCCCEEEECCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCEEEEE
ATSESALYANIILKKGVVKT
EECCCHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA