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The map label for this gene is rbsC [H]

Identifier: 160903038

GI number: 160903038

Start: 1746319

End: 1747266

Strand: Direct

Name: rbsC [H]

Synonym: Pmob_1602

Alternate gene names: 160903038

Gene position: 1746319-1747266 (Clockwise)

Preceding gene: 160903037

Following gene: 160903039

Centisome position: 80.49

GC content: 37.76

Gene sequence:

>948_bases
ATGACTAACAACAAAAAAATAAATTTTACCTGGAGTACTCAAACAGTTATATTATTAGTAGTAGTAGCTATGTGGATTTT
TCTTTCTCTATCTACAGAGAATTTTCTAACTATATCAAATATTCAAAATGTACTTAGGCAAGTGACCATCCAAGGAATAA
ATGCAGTCGGTGTTACACTAGTTATCATTACCGCAGGGATAGATCTATCCATCGGTTCAGTTGTTGCTTTGGTTAACATA
CTTTTTGCAACCCTTTTAGTGGGGGGAACTCCAATTTGGTTTGGAGTTTTGATGGTTCTAGCGCTAGCGGCAGGTCTTGG
TTTTGTAAATGGTTTTTTTGTTCATCAGTTTAGGGTACCACCATTTATTGCAACTTTAGCTATGATGAGTATCGCAAGAG
GAGCTGCATTACTGATTTCCGGGGGAAGAAATGTCTTTGGACTGCCCAGAAGTGTAGCAGAATTTTCATCTGGGACACTG
TTAGGGATTCCTAACTTATTTTGGTTTTTGATAGCTGTAATAGGCTTTATGGAATTTTTATTGAGAAAAACAACATTTGG
AAGATATGTTTATGCAGTTGGGAGTAACCCAGAGGCCGCACGATTATCTGGAATAAATATTAGATGGGTTATTATAGGAG
TTTATATGATAGCTGGATTTTTATGGGGGTTATCTGGAATATTAGAAACTTCAAGGCTTTGGATGGGAGTTCCAAGCACT
GGAACAGGTTATGAATTAGATGCAATAGCTGCAGCCGTCCTTGGAGGAGCAAGTTTAATGGGTGCGCAAGGAAGCGCTAT
TGGAGCATTCTTGGGTGCTTTAGTTATGGCGACTATATATAATGGATCCGTCCTTTTGAACATTAACCCATTTTGGCAAA
GAATAATAGTAGGAATTATTCTAGTGATAACTGTTTCGATTGATCAAATGCGTTCCAGAAGAGGATAA

Upstream 100 bases:

>100_bases
GAGGGAACCATCTCGGGAGAGGTAACTAGGGATGAATTCTCTGAGGAAAAAATTCTATCCATCGCTTTAAAAACTGAAAA
CAACAAGGTAGGTGTAAAGA

Downstream 100 bases:

>100_bases
TAAAGTGAATTCGTGAGGTGATTTTTATGTTAAAAAACATACCTAAGATAATATCTCCAGAATTAATGAAAGTCCTATTA
GAAATGGGACATGGGGATGA

Product: monosaccharide-transporting ATPase

Products: ADP; phosphate; ribose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 315; Mature: 314

Protein sequence:

>315_residues
MTNNKKINFTWSTQTVILLVVVAMWIFLSLSTENFLTISNIQNVLRQVTIQGINAVGVTLVIITAGIDLSIGSVVALVNI
LFATLLVGGTPIWFGVLMVLALAAGLGFVNGFFVHQFRVPPFIATLAMMSIARGAALLISGGRNVFGLPRSVAEFSSGTL
LGIPNLFWFLIAVIGFMEFLLRKTTFGRYVYAVGSNPEAARLSGINIRWVIIGVYMIAGFLWGLSGILETSRLWMGVPST
GTGYELDAIAAAVLGGASLMGAQGSAIGAFLGALVMATIYNGSVLLNINPFWQRIIVGIILVITVSIDQMRSRRG

Sequences:

>Translated_315_residues
MTNNKKINFTWSTQTVILLVVVAMWIFLSLSTENFLTISNIQNVLRQVTIQGINAVGVTLVIITAGIDLSIGSVVALVNI
LFATLLVGGTPIWFGVLMVLALAAGLGFVNGFFVHQFRVPPFIATLAMMSIARGAALLISGGRNVFGLPRSVAEFSSGTL
LGIPNLFWFLIAVIGFMEFLLRKTTFGRYVYAVGSNPEAARLSGINIRWVIIGVYMIAGFLWGLSGILETSRLWMGVPST
GTGYELDAIAAAVLGGASLMGAQGSAIGAFLGALVMATIYNGSVLLNINPFWQRIIVGIILVITVSIDQMRSRRG
>Mature_314_residues
TNNKKINFTWSTQTVILLVVVAMWIFLSLSTENFLTISNIQNVLRQVTIQGINAVGVTLVIITAGIDLSIGSVVALVNIL
FATLLVGGTPIWFGVLMVLALAAGLGFVNGFFVHQFRVPPFIATLAMMSIARGAALLISGGRNVFGLPRSVAEFSSGTLL
GIPNLFWFLIAVIGFMEFLLRKTTFGRYVYAVGSNPEAARLSGINIRWVIIGVYMIAGFLWGLSGILETSRLWMGVPSTG
TGYELDAIAAAVLGGASLMGAQGSAIGAFLGALVMATIYNGSVLLNINPFWQRIIVGIILVITVSIDQMRSRRG

Specific function: Part of the binding-protein-dependent transport system for ribose. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790191, Length=306, Percent_Identity=38.8888888888889, Blast_Score=182, Evalue=3e-47,
Organism=Escherichia coli, GI1788896, Length=298, Percent_Identity=39.5973154362416, Blast_Score=170, Evalue=1e-43,
Organism=Escherichia coli, GI1790524, Length=315, Percent_Identity=32.3809523809524, Blast_Score=161, Evalue=5e-41,
Organism=Escherichia coli, GI145693152, Length=300, Percent_Identity=34, Blast_Score=154, Evalue=6e-39,
Organism=Escherichia coli, GI1787793, Length=277, Percent_Identity=35.7400722021661, Blast_Score=137, Evalue=1e-33,
Organism=Escherichia coli, GI1788471, Length=334, Percent_Identity=35.3293413173653, Blast_Score=126, Evalue=2e-30,
Organism=Escherichia coli, GI1789992, Length=136, Percent_Identity=46.3235294117647, Blast_Score=120, Evalue=8e-29,
Organism=Escherichia coli, GI87082395, Length=303, Percent_Identity=31.6831683168317, Blast_Score=116, Evalue=1e-27,
Organism=Escherichia coli, GI145693214, Length=256, Percent_Identity=34.765625, Blast_Score=104, Evalue=6e-24,
Organism=Escherichia coli, GI1787794, Length=259, Percent_Identity=30.5019305019305, Blast_Score=88, Evalue=7e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 33679; Mature: 33547

Theoretical pI: Translated: 11.08; Mature: 11.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNNKKINFTWSTQTVILLVVVAMWIFLSLSTENFLTISNIQNVLRQVTIQGINAVGVTL
CCCCCEEEEEECHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHCCCHHHHEE
VIITAGIDLSIGSVVALVNILFATLLVGGTPIWFGVLMVLALAAGLGFVNGFFVHQFRVP
EEEECCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCC
PFIATLAMMSIARGAALLISGGRNVFGLPRSVAEFSSGTLLGIPNLFWFLIAVIGFMEFL
HHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHCCCCEECHHHHHHHHHHHHHHHHHH
LRKTTFGRYVYAVGSNPEAARLSGINIRWVIIGVYMIAGFLWGLSGILETSRLWMGVPST
HHHHCCCCEEEEECCCCCCHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCC
GTGYELDAIAAAVLGGASLMGAQGSAIGAFLGALVMATIYNGSVLLNINPFWQRIIVGII
CCCCCHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHH
LVITVSIDQMRSRRG
HHHHHHHHHHHCCCC
>Mature Secondary Structure 
TNNKKINFTWSTQTVILLVVVAMWIFLSLSTENFLTISNIQNVLRQVTIQGINAVGVTL
CCCCEEEEEECHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHCCCHHHHEE
VIITAGIDLSIGSVVALVNILFATLLVGGTPIWFGVLMVLALAAGLGFVNGFFVHQFRVP
EEEECCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCC
PFIATLAMMSIARGAALLISGGRNVFGLPRSVAEFSSGTLLGIPNLFWFLIAVIGFMEFL
HHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHCCCCEECHHHHHHHHHHHHHHHHHH
LRKTTFGRYVYAVGSNPEAARLSGINIRWVIIGVYMIAGFLWGLSGILETSRLWMGVPST
HHHHCCCCEEEEECCCCCCHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCC
GTGYELDAIAAAVLGGASLMGAQGSAIGAFLGALVMATIYNGSVLLNINPFWQRIIVGII
CCCCCHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHH
LVITVSIDQMRSRRG
HHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; ribose [Periplasm]; H2O [C]

Specific reaction: ATP + ribose [Periplasm] + H2O = ADP + phosphate + ribose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7921236; 9353933; 9384377 [H]