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The map label for this gene is frr

Identifier: 160902092

GI number: 160902092

Start: 668832

End: 669395

Strand: Direct

Name: frr

Synonym: Pmob_0616

Alternate gene names: 160902092

Gene position: 668832-669395 (Clockwise)

Preceding gene: 160902090

Following gene: 160902093

Centisome position: 30.83

GC content: 33.33

Gene sequence:

>564_bases
ATGGCAAAGAGAAGTTCTTATGCGAAAGAAGCAGAAGAAAAAATGAAAAAAACTCTTGAACATTTTGAGGACGAATTAAA
AAAAGTAAGAACCGGACGACCTACTACCGCTATTTTTGAGGATATAAAAGTCGATTATTATGGTATGCCTACTCCCATTA
ATCAGGTTGCAACCTTAAGTGTTGGAGAAGAAAGAACCGTTGTCATAACCCCATGGGATAAAAAGATGCTGGAACCCATA
GAAAAAGCGATAAATTCTTCTAATTTTGGTTTTCACGCTATAAATGATGGTAACGTAGTGAGGGTATCTTTCCCAAATCC
CACTATTGAAGAAAGAAGAAAACTGGTAAAAGCTATAAAAGAGATGCTAGAAGAAACAAAAGTGGCTTTAAGAAATATTA
GAAGAGATGATATAAAAAAGGTTAAAGAAATAAAGAACGAGGGTTCAATAAGTGAAGACGAGGCAAAAAAATTCGAAGAA
GAAATCCAAGAGATTTTAAAAGAAAATGAAGATGAAGCAGAAAAAATATTCCAAAGAAAAGAAAAAGAGATCATGGAGTC
ATAA

Upstream 100 bases:

>100_bases
TTTTCGTGTTTTTTCGCTCTTTCAATATTATATCATATAAGAAAAACCCTTTGGTGTGGTATAATATTTGCTGAATTAAA
TTTTATGCGGAGGTGAAGTC

Downstream 100 bases:

>100_bases
ATGTGGAAAATATAAGTATGAAACTTTCAAAAGTACCTGCCCATGTTGGTATAATTATGGATGGAAACGGAAGATGGGCA
ACTAAAAGTGGCTATGACAG

Product: ribosome recycling factor

Products: NA

Alternate protein names: RRF; Ribosome-releasing factor

Number of amino acids: Translated: 187; Mature: 186

Protein sequence:

>187_residues
MAKRSSYAKEAEEKMKKTLEHFEDELKKVRTGRPTTAIFEDIKVDYYGMPTPINQVATLSVGEERTVVITPWDKKMLEPI
EKAINSSNFGFHAINDGNVVRVSFPNPTIEERRKLVKAIKEMLEETKVALRNIRRDDIKKVKEIKNEGSISEDEAKKFEE
EIQEILKENEDEAEKIFQRKEKEIMES

Sequences:

>Translated_187_residues
MAKRSSYAKEAEEKMKKTLEHFEDELKKVRTGRPTTAIFEDIKVDYYGMPTPINQVATLSVGEERTVVITPWDKKMLEPI
EKAINSSNFGFHAINDGNVVRVSFPNPTIEERRKLVKAIKEMLEETKVALRNIRRDDIKKVKEIKNEGSISEDEAKKFEE
EIQEILKENEDEAEKIFQRKEKEIMES
>Mature_186_residues
AKRSSYAKEAEEKMKKTLEHFEDELKKVRTGRPTTAIFEDIKVDYYGMPTPINQVATLSVGEERTVVITPWDKKMLEPIE
KAINSSNFGFHAINDGNVVRVSFPNPTIEERRKLVKAIKEMLEETKVALRNIRRDDIKKVKEIKNEGSISEDEAKKFEEE
IQEILKENEDEAEKIFQRKEKEIMES

Specific function: Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another

COG id: COG0233

COG function: function code J; Ribosome recycling factor

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RRF family

Homologues:

Organism=Escherichia coli, GI1786368, Length=183, Percent_Identity=37.1584699453552, Blast_Score=129, Evalue=1e-31,

Paralogues:

None

Copy number: 840 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): RRF_PETMO (A9BJD6)

Other databases:

- EMBL:   CP000879
- RefSeq:   YP_001567673.1
- ProteinModelPortal:   A9BJD6
- SMR:   A9BJD6
- GeneID:   5757300
- GenomeReviews:   CP000879_GR
- KEGG:   pmo:Pmob_0616
- HOGENOM:   HBG533975
- OMA:   YYGAETP
- BioCyc:   PMOB403833:PMOB_0616-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00040
- InterPro:   IPR002661
- InterPro:   IPR015998
- PANTHER:   PTHR20982
- PANTHER:   PTHR20982:SF3
- TIGRFAMs:   TIGR00496

Pfam domain/function: PF01765 RRF; SSF55194 Ribosome_recyc_fac

EC number: NA

Molecular weight: Translated: 21775; Mature: 21644

Theoretical pI: Translated: 5.32; Mature: 5.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKRSSYAKEAEEKMKKTLEHFEDELKKVRTGRPTTAIFEDIKVDYYGMPTPINQVATLS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHEEE
VGEERTVVITPWDKKMLEPIEKAINSSNFGFHAINDGNVVRVSFPNPTIEERRKLVKAIK
CCCCCEEEECCCCHHHHHHHHHHHCCCCCCEEEECCCCEEEEECCCCCHHHHHHHHHHHH
EMLEETKVALRNIRRDDIKKVKEIKNEGSISEDEAKKFEEEIQEILKENEDEAEKIFQRK
HHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
EKEIMES
HHHHHCC
>Mature Secondary Structure 
AKRSSYAKEAEEKMKKTLEHFEDELKKVRTGRPTTAIFEDIKVDYYGMPTPINQVATLS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHEEE
VGEERTVVITPWDKKMLEPIEKAINSSNFGFHAINDGNVVRVSFPNPTIEERRKLVKAIK
CCCCCEEEECCCCHHHHHHHHHHHCCCCCCEEEECCCCEEEEECCCCCHHHHHHHHHHHH
EMLEETKVALRNIRRDDIKKVKEIKNEGSISEDEAKKFEEEIQEILKENEDEAEKIFQRK
HHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
EKEIMES
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA