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The map label for this gene is rnfA [H]

Identifier: 160902090

GI number: 160902090

Start: 666080

End: 666655

Strand: Direct

Name: rnfA [H]

Synonym: Pmob_0614

Alternate gene names: 160902090

Gene position: 666080-666655 (Clockwise)

Preceding gene: 160902089

Following gene: 160902092

Centisome position: 30.7

GC content: 34.72

Gene sequence:

>576_bases
ATGAATCTTATCCTTCTCTTTATTTCAGCCGCTTTGGTAAACAATATTATTTTAACTAGATTTTTAGGTATTTGCCCTTT
TTTAGGAGTTTCTAGAAGCAAAAGTTCCGCTGTTGGAATGTCTATCGCAGTAATTTTTGTCATGACGATAGCAGGAGTAA
TAACTTGGCTCTTAAATCAGATACTAATAATGCTTGGAGTAGAATTTTTAAGAACGATCGTGTTTATTTTGGTAATTGCT
GTACTTGTTCAATTTGTTGAGTTCTTTATTAAGAAATCAAGTCCAGCCCTTTACGAAGCCTTGGGGATATACTTACCACT
CATAACAACCAATTGTGCAATATTGGGGATCGCATTGTTAAACATACAAACTAATTACACCTTTATCGAAAGTTTGGTAA
ACTCTTTTGCTTCTGGATTGGGATTTTCGCTGGCATTAATAATATTTTCTTCAATAAGAGAAAAAATGCAACTAAACAAT
GTCCCAAAACCCTTCCAAGGTACCGCTTTAGCGCTAATAACGGCTGGACTTCTTTCAATGGCTTTTATGGGGTTTTCAGG
TTTGGTGAAATTATGA

Upstream 100 bases:

>100_bases
TACCACCTGGCGCATTCATTACTTTAGGACTTTTACTTGGAATGTTCAATTCGATAGGTATAAGTAGAGAAAACAAAAAG
AAGAAGGCAGGTGCTAAAAA

Downstream 100 bases:

>100_bases
AAAGGGAGAATAATCTCCCTTTCACTTTTTGTATATGTAGAATTCATCAATTATTTCGTCAATTGGAGTATATTTATTTG
GGAAAAGAGGATTATCAACC

Product: RnfABCDGE type electron transport complex subunit A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 191; Mature: 191

Protein sequence:

>191_residues
MNLILLFISAALVNNIILTRFLGICPFLGVSRSKSSAVGMSIAVIFVMTIAGVITWLLNQILIMLGVEFLRTIVFILVIA
VLVQFVEFFIKKSSPALYEALGIYLPLITTNCAILGIALLNIQTNYTFIESLVNSFASGLGFSLALIIFSSIREKMQLNN
VPKPFQGTALALITAGLLSMAFMGFSGLVKL

Sequences:

>Translated_191_residues
MNLILLFISAALVNNIILTRFLGICPFLGVSRSKSSAVGMSIAVIFVMTIAGVITWLLNQILIMLGVEFLRTIVFILVIA
VLVQFVEFFIKKSSPALYEALGIYLPLITTNCAILGIALLNIQTNYTFIESLVNSFASGLGFSLALIIFSSIREKMQLNN
VPKPFQGTALALITAGLLSMAFMGFSGLVKL
>Mature_191_residues
MNLILLFISAALVNNIILTRFLGICPFLGVSRSKSSAVGMSIAVIFVMTIAGVITWLLNQILIMLGVEFLRTIVFILVIA
VLVQFVEFFIKKSSPALYEALGIYLPLITTNCAILGIALLNIQTNYTFIESLVNSFASGLGFSLALIIFSSIREKMQLNN
VPKPFQGTALALITAGLLSMAFMGFSGLVKL

Specific function: May be part of a membrane complex involved in electron transport [H]

COG id: COG4657

COG function: function code C; Predicted NADH:ubiquinone oxidoreductase, subunit RnfA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nqrDE/rnfAE family [H]

Homologues:

Organism=Escherichia coli, GI1787914, Length=191, Percent_Identity=55.4973821989529, Blast_Score=223, Evalue=6e-60,
Organism=Escherichia coli, GI1787919, Length=146, Percent_Identity=30.1369863013699, Blast_Score=64, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003667
- InterPro:   IPR011293 [H]

Pfam domain/function: PF02508 Rnf-Nqr [H]

EC number: NA

Molecular weight: Translated: 20701; Mature: 20701

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLILLFISAALVNNIILTRFLGICPFLGVSRSKSSAVGMSIAVIFVMTIAGVITWLLNQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
ILIMLGVEFLRTIVFILVIAVLVQFVEFFIKKSSPALYEALGIYLPLITTNCAILGIALL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
NIQTNYTFIESLVNSFASGLGFSLALIIFSSIREKMQLNNVPKPFQGTALALITAGLLSM
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
AFMGFSGLVKL
HHHHHHHHCCC
>Mature Secondary Structure
MNLILLFISAALVNNIILTRFLGICPFLGVSRSKSSAVGMSIAVIFVMTIAGVITWLLNQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
ILIMLGVEFLRTIVFILVIAVLVQFVEFFIKKSSPALYEALGIYLPLITTNCAILGIALL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
NIQTNYTFIESLVNSFASGLGFSLALIIFSSIREKMQLNNVPKPFQGTALALITAGLLSM
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
AFMGFSGLVKL
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA