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The map label for this gene is rnfE [H]

Identifier: 160902089

GI number: 160902089

Start: 665463

End: 666083

Strand: Direct

Name: rnfE [H]

Synonym: Pmob_0613

Alternate gene names: 160902089

Gene position: 665463-666083 (Clockwise)

Preceding gene: 160902088

Following gene: 160902090

Centisome position: 30.67

GC content: 35.91

Gene sequence:

>621_bases
ATGGCTGATCTAAAAAATTTTACCAATGGTTTGATAAAAAACAACCCTACTTTTGTTCAAGTGTTAGGAATGTGTCCTAC
TTTAGCTACAACTACAAGCGCAGAAAATGGTTTAGGAATGGGAATAGCCACTCTAGCTGTTTTAACAATGTCAAACATTG
TAATCTCTTTGATCAGGAAAATAGTTCCCAAAAAGATAAGAATTCCCATTTATATCGTTATTATAGCTTCTTTTGTAACA
ATGATAGATCTCATAATGCACGGACTAACATACGAATTATGGCAGACTTTGGGAATATTTATACCTTTGATAGTTGTGAA
CTGTATCATAATGGGAAGGGCAGAATCTTTCGCATCAAAAAACGGGGTATTAGATTCAATATTTGATGCCTTGGGAATCG
GTTTAGGTTTTACAGGAGCACTCGTATTATTGGGATCAGTAAGAGAATTATTGGGTAACGGAACGATCTTTGGTTTTACG
GTGTGGGGAGACGCCCTCAACTTATACCTTTTCATACTACCACCTGGCGCATTCATTACTTTAGGACTTTTACTTGGAAT
GTTCAATTCGATAGGTATAAGTAGAGAAAACAAAAAGAAGAAGGCAGGTGCTAAAAAATGA

Upstream 100 bases:

>100_bases
AGCGATGTAATGACAGGAGCAACAATAACTCCAAGAGCCGTTGCTGATTCTATTAATGCAGCTGTAGAATTTTTAAAAGA
GGAAGGGGTGATGTGAAAAG

Downstream 100 bases:

>100_bases
ATCTTATCCTTCTCTTTATTTCAGCCGCTTTGGTAAACAATATTATTTTAACTAGATTTTTAGGTATTTGCCCTTTTTTA
GGAGTTTCTAGAAGCAAAAG

Product: electron transport complex RsxE subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 206; Mature: 205

Protein sequence:

>206_residues
MADLKNFTNGLIKNNPTFVQVLGMCPTLATTTSAENGLGMGIATLAVLTMSNIVISLIRKIVPKKIRIPIYIVIIASFVT
MIDLIMHGLTYELWQTLGIFIPLIVVNCIIMGRAESFASKNGVLDSIFDALGIGLGFTGALVLLGSVRELLGNGTIFGFT
VWGDALNLYLFILPPGAFITLGLLLGMFNSIGISRENKKKKAGAKK

Sequences:

>Translated_206_residues
MADLKNFTNGLIKNNPTFVQVLGMCPTLATTTSAENGLGMGIATLAVLTMSNIVISLIRKIVPKKIRIPIYIVIIASFVT
MIDLIMHGLTYELWQTLGIFIPLIVVNCIIMGRAESFASKNGVLDSIFDALGIGLGFTGALVLLGSVRELLGNGTIFGFT
VWGDALNLYLFILPPGAFITLGLLLGMFNSIGISRENKKKKAGAKK
>Mature_205_residues
ADLKNFTNGLIKNNPTFVQVLGMCPTLATTTSAENGLGMGIATLAVLTMSNIVISLIRKIVPKKIRIPIYIVIIASFVTM
IDLIMHGLTYELWQTLGIFIPLIVVNCIIMGRAESFASKNGVLDSIFDALGIGLGFTGALVLLGSVRELLGNGTIFGFTV
WGDALNLYLFILPPGAFITLGLLLGMFNSIGISRENKKKKAGAKK

Specific function: May be part of a membrane complex involved in electron transport [H]

COG id: COG4660

COG function: function code C; Predicted NADH:ubiquinone oxidoreductase, subunit RnfE

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nqrDE/rnfAE family [H]

Homologues:

Organism=Escherichia coli, GI1787919, Length=201, Percent_Identity=47.2636815920398, Blast_Score=163, Evalue=9e-42,
Organism=Escherichia coli, GI1787914, Length=152, Percent_Identity=30.2631578947368, Blast_Score=71, Evalue=5e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003667
- InterPro:   IPR010968 [H]

Pfam domain/function: PF02508 Rnf-Nqr [H]

EC number: NA

Molecular weight: Translated: 22092; Mature: 21961

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADLKNFTNGLIKNNPTFVQVLGMCPTLATTTSAENGLGMGIATLAVLTMSNIVISLIRK
CCCHHHHHHHHHCCCCHHHHHHHHCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
IVPKKIRIPIYIVIIASFVTMIDLIMHGLTYELWQTLGIFIPLIVVNCIIMGRAESFASK
HCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHC
NGVLDSIFDALGIGLGFTGALVLLGSVRELLGNGTIFGFTVWGDALNLYLFILPPGAFIT
CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCEEEEEEEECCHHHHH
LGLLLGMFNSIGISRENKKKKAGAKK
HHHHHHHHHHCCCCCCCHHHCCCCCC
>Mature Secondary Structure 
ADLKNFTNGLIKNNPTFVQVLGMCPTLATTTSAENGLGMGIATLAVLTMSNIVISLIRK
CCHHHHHHHHHCCCCHHHHHHHHCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
IVPKKIRIPIYIVIIASFVTMIDLIMHGLTYELWQTLGIFIPLIVVNCIIMGRAESFASK
HCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHC
NGVLDSIFDALGIGLGFTGALVLLGSVRELLGNGTIFGFTVWGDALNLYLFILPPGAFIT
CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCEEEEEEEECCHHHHH
LGLLLGMFNSIGISRENKKKKAGAKK
HHHHHHHHHHCCCCCCCHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA