| Definition | Petrotoga mobilis SJ95 chromosome, complete genome. |
|---|---|
| Accession | NC_010003 |
| Length | 2,169,548 |
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The map label for this gene is ebgA [C]
Identifier: 160901973
GI number: 160901973
Start: 540297
End: 542678
Strand: Direct
Name: ebgA [C]
Synonym: Pmob_0497
Alternate gene names: 160901973
Gene position: 540297-542678 (Clockwise)
Preceding gene: 160901972
Following gene: 160901974
Centisome position: 24.9
GC content: 34.13
Gene sequence:
>2382_bases TTGAAAATATCTTTAAATGGAAAATGGAAGGTTTACGATAACGAAAAAGAGTTTGAGTTTGATGGAAACGTTCCTGGAAC CGTACAAGGAGACCTTGTGGATTTGAATCTCATGCCTCACCCTTATGTAGGAGAAAATGAAAAACTTTTCAAAAGGTTAG AATGGAAAAATTGGATATACGAGAAGAAATTTCACATAGAAGAGATAAACGATGAGCTACGTTACGATCTTGTATTAGAG GGTGTGGATACCCTTTCAAATATTTACCTTAACGATAATTTTGTTGGAGAAACCGAGGATATGTTCATAGAATACCGGTT TGATATCAAAAAGTATTTGAAAATTGGAGAAAATTCTTTAAAAATAGAGATTAAATCTCCCATAGATCTCCCTAAAAGAT TTGAAAAAAATTATGGGAAATTACACTCTGGCGAAGAAACCGCTAGAGTTTACATAAGAAAAGCTCAGTATTCCTATGGC TGGGACTGGGGAGCAAGAATAGCTACAAGCGGGATATACAGAGATATATACATAGAAAGTTACAAAGATGCTAGACTTTT TGGTTCCACCGCTTTTTTGGAGACTTTAGATGGAAAAGTTAACTTTTCCGGTTACATTGATTCGTGTATCAACTATACTA AAAACTACGAGGTAGAAATCCTTTTCAATGGAAATCCAGTAATTACATTACCAGTAACCACTAGTGTTGAAAATTACAAG TTTGAAGGTTCTAAAAGAATAGAGAATTTAAAGCTTTGGTATCCACACGATTTGGGTGAAAGTTATTTATACGAAGTTGA GTTCAGACTTAAGGAAAATAAAGAAGTAATCTATGGTGAAAAAAAGAAAATAGGTTTTAGAATCGTCAAAGTAGTGAGAG AAAATGATTCAGAAGGAGAAAGCTTTATCTTCGAGATAAACGGCAGAAAAATCTTCGCCAAAGGCGCAAATTGGATACCT GCTGAAAATATCTTAAGTTGGTTAAAAGGGAGTGATTACGATAAACTTCTCAAAATGGCGAAGGAATCCAATATGAACAT GTTGAGAGTATGGGGAGGTGGCCTTTACGAAGATCCTGCATTTTACAACAGATGTGATGAGTTAGGAATATTAGTTTGGC AAGACTTCATGTTTGCATGTGCGGAATATCCTGACCATATAGATTGGTTTAGAAAGCTTGCAAATGAAGAAGTAAAACAT CAAGTATTGAAACTAAGACACCATCCAAGTATAGTCCTTTGGTGCGGAAATAATGAGAATAATTGGGGCTTTGAAGAATG GGACTACAAATTGAAAGTGGATGGGAAAAATCTTGGAAATAGACTTTATTTGGAAGATTTTCCTAAAATATGTGCTCAAG AAGATCCATCGAGACTGTACTGGCCATCAAGCCCATACGGTGGCAGTAGAGCTAACTCTTCTGAAGCAGGAGACAGACAT GTTTGGGAAATCTGGTCCGGATGGCAAGATTATAAATACTATACATGGGACACTTCAAAGTTCGTAAGTGAATTTGGATT TCAAGCGGCTCCAGATCCGAAAACTATTGATTTCTTTGCAGAAGACAAAGAAAAAGATATATTTTCACCAACGATGTTAA ATCATAATAAACAAGTTGAAGGTCCCGAAAGACTCTTAAGGTTCATCAATGGGCATTATGGATTGATTGACAACTTTGAT TCAATTGTTTATTTAACTCAACTCAACCAAGCAGAGGCTATTAAAACAGGAGTAGAACACTGGAGAAACAGAAAATACAA AACAGCCGGAACTCTTTATTGGCAAATAAATGATTCATGGCCTGTTTTCAGTTGGGCTTCAATAGATTATTTTAAAAGGC CCAAGCCTTTATACTTTTACACTAAAAGATTTTATAATCAATTGTTAGCGATTGCCAAAAATAAAGATGAAAAGGTCATA ATATCACTGATAAACGATGGAATCAAAATCAAACTTGATTTGGAATTTCAACTTTGGTCTCTAAATGGGAAAAAACTTAT GCAAAAAGAATATTCAAACATAAAAACGTCCGAAGATTCTGTAATAACTGTTGATCAACTCAATATTTCCAACATTGACT TAGATAACTCCATAGCTTACTTAATTCTAAAACAAAATGGAAAAACCATAATAGAAAACCACGAATTATTTGCAGATTTA AGAAAAAATAAATTAAACGATCCAAAGATTACATACGAAAAAGAAGGAAACAACTTGATATTGAGTTGTGAAAAACCGGC GTGGGGAGTAAACGTTAGGGTAAATGGAGAAAATTATTCTCAAGATAACTTCTTTACTCTTTTTCCATCCTATCAAAAAG TTTTAAATAATATTGAAGGGGAAATTAGCATAAAAAGCGCCTTTGATTATTTGAGGAGATGA
Upstream 100 bases:
>100_bases AAAATATAAAATCATCAAAGAGACGCTATATATAAGGTTTTAGAGTTTTTAAGGTTTTAAAGACAGTACCAAAAAATATT AATAGGAGGAGAAATTTCAA
Downstream 100 bases:
>100_bases GTATTATGGATTTTAATTTTGATCATTTAGCAATCACAGTTTCCGATTTGGAAAAATCTGTTGGATTTTACAGAGATATT ATGGGTTTTAGAGTTTTAGG
Product: glycoside hydrolase family protein
Products: NA
Alternate protein names: Glycoside Hydrolase Family Protein; Beta-Mannosidase Protein; Glycoside Hydrolase; Mannosidase; Coagulation Factor 5/8 Type Domain Protein; Glycoside Hydrolase Family 2 TIM Barrel; Glycoside Hydrolase Family 2 Protein; Glycosidase; Beta-Galactosidase; Glycosyl Hydrolase; Beta-Galactosidase/Beta-Glucuronidase; Beta-Glucuronidase; Exported Glycosyl Hydrolase; Beta-Galactosidase/Beta- Glucuronidase Family Protein; O-Glycosyl Hydrolase; Beta-D-Mannosidase; Beta-Mannosidase Man2A; DS Domain/Family 2 Glycosyl Hydrolase; Beta-Galactosidase/Beta; Mannosylglycoprotein Endo-Beta-Mannosidase; Beta-Mannosidase-Related Protein; BETA-Mannosidase Protein
Number of amino acids: Translated: 793; Mature: 793
Protein sequence:
>793_residues MKISLNGKWKVYDNEKEFEFDGNVPGTVQGDLVDLNLMPHPYVGENEKLFKRLEWKNWIYEKKFHIEEINDELRYDLVLE GVDTLSNIYLNDNFVGETEDMFIEYRFDIKKYLKIGENSLKIEIKSPIDLPKRFEKNYGKLHSGEETARVYIRKAQYSYG WDWGARIATSGIYRDIYIESYKDARLFGSTAFLETLDGKVNFSGYIDSCINYTKNYEVEILFNGNPVITLPVTTSVENYK FEGSKRIENLKLWYPHDLGESYLYEVEFRLKENKEVIYGEKKKIGFRIVKVVRENDSEGESFIFEINGRKIFAKGANWIP AENILSWLKGSDYDKLLKMAKESNMNMLRVWGGGLYEDPAFYNRCDELGILVWQDFMFACAEYPDHIDWFRKLANEEVKH QVLKLRHHPSIVLWCGNNENNWGFEEWDYKLKVDGKNLGNRLYLEDFPKICAQEDPSRLYWPSSPYGGSRANSSEAGDRH VWEIWSGWQDYKYYTWDTSKFVSEFGFQAAPDPKTIDFFAEDKEKDIFSPTMLNHNKQVEGPERLLRFINGHYGLIDNFD SIVYLTQLNQAEAIKTGVEHWRNRKYKTAGTLYWQINDSWPVFSWASIDYFKRPKPLYFYTKRFYNQLLAIAKNKDEKVI ISLINDGIKIKLDLEFQLWSLNGKKLMQKEYSNIKTSEDSVITVDQLNISNIDLDNSIAYLILKQNGKTIIENHELFADL RKNKLNDPKITYEKEGNNLILSCEKPAWGVNVRVNGENYSQDNFFTLFPSYQKVLNNIEGEISIKSAFDYLRR
Sequences:
>Translated_793_residues MKISLNGKWKVYDNEKEFEFDGNVPGTVQGDLVDLNLMPHPYVGENEKLFKRLEWKNWIYEKKFHIEEINDELRYDLVLE GVDTLSNIYLNDNFVGETEDMFIEYRFDIKKYLKIGENSLKIEIKSPIDLPKRFEKNYGKLHSGEETARVYIRKAQYSYG WDWGARIATSGIYRDIYIESYKDARLFGSTAFLETLDGKVNFSGYIDSCINYTKNYEVEILFNGNPVITLPVTTSVENYK FEGSKRIENLKLWYPHDLGESYLYEVEFRLKENKEVIYGEKKKIGFRIVKVVRENDSEGESFIFEINGRKIFAKGANWIP AENILSWLKGSDYDKLLKMAKESNMNMLRVWGGGLYEDPAFYNRCDELGILVWQDFMFACAEYPDHIDWFRKLANEEVKH QVLKLRHHPSIVLWCGNNENNWGFEEWDYKLKVDGKNLGNRLYLEDFPKICAQEDPSRLYWPSSPYGGSRANSSEAGDRH VWEIWSGWQDYKYYTWDTSKFVSEFGFQAAPDPKTIDFFAEDKEKDIFSPTMLNHNKQVEGPERLLRFINGHYGLIDNFD SIVYLTQLNQAEAIKTGVEHWRNRKYKTAGTLYWQINDSWPVFSWASIDYFKRPKPLYFYTKRFYNQLLAIAKNKDEKVI ISLINDGIKIKLDLEFQLWSLNGKKLMQKEYSNIKTSEDSVITVDQLNISNIDLDNSIAYLILKQNGKTIIENHELFADL RKNKLNDPKITYEKEGNNLILSCEKPAWGVNVRVNGENYSQDNFFTLFPSYQKVLNNIEGEISIKSAFDYLRR >Mature_793_residues MKISLNGKWKVYDNEKEFEFDGNVPGTVQGDLVDLNLMPHPYVGENEKLFKRLEWKNWIYEKKFHIEEINDELRYDLVLE GVDTLSNIYLNDNFVGETEDMFIEYRFDIKKYLKIGENSLKIEIKSPIDLPKRFEKNYGKLHSGEETARVYIRKAQYSYG WDWGARIATSGIYRDIYIESYKDARLFGSTAFLETLDGKVNFSGYIDSCINYTKNYEVEILFNGNPVITLPVTTSVENYK FEGSKRIENLKLWYPHDLGESYLYEVEFRLKENKEVIYGEKKKIGFRIVKVVRENDSEGESFIFEINGRKIFAKGANWIP AENILSWLKGSDYDKLLKMAKESNMNMLRVWGGGLYEDPAFYNRCDELGILVWQDFMFACAEYPDHIDWFRKLANEEVKH QVLKLRHHPSIVLWCGNNENNWGFEEWDYKLKVDGKNLGNRLYLEDFPKICAQEDPSRLYWPSSPYGGSRANSSEAGDRH VWEIWSGWQDYKYYTWDTSKFVSEFGFQAAPDPKTIDFFAEDKEKDIFSPTMLNHNKQVEGPERLLRFINGHYGLIDNFD SIVYLTQLNQAEAIKTGVEHWRNRKYKTAGTLYWQINDSWPVFSWASIDYFKRPKPLYFYTKRFYNQLLAIAKNKDEKVI ISLINDGIKIKLDLEFQLWSLNGKKLMQKEYSNIKTSEDSVITVDQLNISNIDLDNSIAYLILKQNGKTIIENHELFADL RKNKLNDPKITYEKEGNNLILSCEKPAWGVNVRVNGENYSQDNFFTLFPSYQKVLNNIEGEISIKSAFDYLRR
Specific function: The Wild-Type Enzyme Is An Ineffective Lactase. Two Classes Of Point Mutations Dramatically Improve Activity Of The Enzyme. [C]
COG id: COG3250
COG function: function code G; Beta-galactosidase/beta-glucuronidase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI84798622, Length=724, Percent_Identity=30.3867403314917, Blast_Score=315, Evalue=1e-85, Organism=Caenorhabditis elegans, GI17550784, Length=719, Percent_Identity=27.3991655076495, Blast_Score=247, Evalue=2e-65, Organism=Drosophila melanogaster, GI24643838, Length=779, Percent_Identity=26.9576379974326, Blast_Score=251, Evalue=1e-66, Organism=Drosophila melanogaster, GI24643840, Length=721, Percent_Identity=26.9070735090153, Blast_Score=230, Evalue=3e-60,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.2.1.25
Molecular weight: Translated: 93255; Mature: 93255
Theoretical pI: Translated: 5.57; Mature: 5.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKISLNGKWKVYDNEKEFEFDGNVPGTVQGDLVDLNLMPHPYVGENEKLFKRLEWKNWIY CEEEECCEEEEECCCCCEEECCCCCCCEECCEEEEECCCCCCCCCCHHHHHHHHHHHHHH EKKFHIEEINDELRYDLVLEGVDTLSNIYLNDNFVGETEDMFIEYRFDIKKYLKIGENSL HCEEEHHHHCCHHEEEEEEECHHHHHEEEECCCCCCCCCCEEEEEEECHHHHHHCCCCEE KIEIKSPIDLPKRFEKNYGKLHSGEETARVYIRKAQYSYGWDWGARIATSGIYRDIYIES EEEECCCCCCHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCCCCHHHHCCCEEEEEEEC YKDARLFGSTAFLETLDGKVNFSGYIDSCINYTKNYEVEILFNGNPVITLPVTTSVENYK CCCCCCCCCHHHHHHCCCCEEEHHHHHHHHCCCCCEEEEEEECCCCEEEEEEEECCCCEE FEGSKRIENLKLWYPHDLGESYLYEVEFRLKENKEVIYGEKKKIGFRIVKVVRENDSEGE ECCCCCCCEEEEECCCCCCCCEEEEEEEEEECCCEEEECCCHHHHHEEEEEECCCCCCCC SFIFEINGRKIFAKGANWIPAENILSWLKGSDYDKLLKMAKESNMNMLRVWGGGLYEDPA EEEEEECCCEEEECCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCH FYNRCDELGILVWQDFMFACAEYPDHIDWFRKLANEEVKHQVLKLRHHPSIVLWCGNNEN HHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCC NWGFEEWDYKLKVDGKNLGNRLYLEDFPKICAQEDPSRLYWPSSPYGGSRANSSEAGDRH CCCCCCCCEEEEECCCCCCCEEEHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCC VWEIWSGWQDYKYYTWDTSKFVSEFGFQAAPDPKTIDFFAEDKEKDIFSPTMLNHNKQVE HHHHHCCCCCCEEEEECHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCHHCCCCCCCC GPERLLRFINGHYGLIDNFDSIVYLTQLNQAEAIKTGVEHWRNRKYKTAGTLYWQINDSW CHHHHHHHHCCCCCEECCCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEEEEEEEECCCC PVFSWASIDYFKRPKPLYFYTKRFYNQLLAIAKNKDEKVIISLINDGIKIKLDLEFQLWS CEEEEECCHHHCCCCCEEHHHHHHHHHHHHHHCCCCCEEEEEEECCCEEEEEEEEEEEEE LNGKKLMQKEYSNIKTSEDSVITVDQLNISNIDLDNSIAYLILKQNGKTIIENHELFADL CCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCEEEECHHHHHHH RKNKLNDPKITYEKEGNNLILSCEKPAWGVNVRVNGENYSQDNFFTLFPSYQKVLNNIEG HHCCCCCCCEEEEECCCEEEEEECCCCCEEEEEECCCCCCCCCEEEECHHHHHHHHCCCC EISIKSAFDYLRR CEEHHHHHHHHCC >Mature Secondary Structure MKISLNGKWKVYDNEKEFEFDGNVPGTVQGDLVDLNLMPHPYVGENEKLFKRLEWKNWIY CEEEECCEEEEECCCCCEEECCCCCCCEECCEEEEECCCCCCCCCCHHHHHHHHHHHHHH EKKFHIEEINDELRYDLVLEGVDTLSNIYLNDNFVGETEDMFIEYRFDIKKYLKIGENSL HCEEEHHHHCCHHEEEEEEECHHHHHEEEECCCCCCCCCCEEEEEEECHHHHHHCCCCEE KIEIKSPIDLPKRFEKNYGKLHSGEETARVYIRKAQYSYGWDWGARIATSGIYRDIYIES EEEECCCCCCHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCCCCHHHHCCCEEEEEEEC YKDARLFGSTAFLETLDGKVNFSGYIDSCINYTKNYEVEILFNGNPVITLPVTTSVENYK CCCCCCCCCHHHHHHCCCCEEEHHHHHHHHCCCCCEEEEEEECCCCEEEEEEEECCCCEE FEGSKRIENLKLWYPHDLGESYLYEVEFRLKENKEVIYGEKKKIGFRIVKVVRENDSEGE ECCCCCCCEEEEECCCCCCCCEEEEEEEEEECCCEEEECCCHHHHHEEEEEECCCCCCCC SFIFEINGRKIFAKGANWIPAENILSWLKGSDYDKLLKMAKESNMNMLRVWGGGLYEDPA EEEEEECCCEEEECCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCH FYNRCDELGILVWQDFMFACAEYPDHIDWFRKLANEEVKHQVLKLRHHPSIVLWCGNNEN HHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCC NWGFEEWDYKLKVDGKNLGNRLYLEDFPKICAQEDPSRLYWPSSPYGGSRANSSEAGDRH CCCCCCCCEEEEECCCCCCCEEEHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCC VWEIWSGWQDYKYYTWDTSKFVSEFGFQAAPDPKTIDFFAEDKEKDIFSPTMLNHNKQVE HHHHHCCCCCCEEEEECHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCHHCCCCCCCC GPERLLRFINGHYGLIDNFDSIVYLTQLNQAEAIKTGVEHWRNRKYKTAGTLYWQINDSW CHHHHHHHHCCCCCEECCCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEEEEEEEECCCC PVFSWASIDYFKRPKPLYFYTKRFYNQLLAIAKNKDEKVIISLINDGIKIKLDLEFQLWS CEEEEECCHHHCCCCCEEHHHHHHHHHHHHHHCCCCCEEEEEEECCCEEEEEEEEEEEEE LNGKKLMQKEYSNIKTSEDSVITVDQLNISNIDLDNSIAYLILKQNGKTIIENHELFADL CCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCEEEECHHHHHHH RKNKLNDPKITYEKEGNNLILSCEKPAWGVNVRVNGENYSQDNFFTLFPSYQKVLNNIEG HHCCCCCCCEEEEECCCEEEEEECCCCCEEEEEECCCCCCCCCEEEECHHHHHHHHCCCC EISIKSAFDYLRR CEEHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA