Click here to switch to the map view.

The map label for this gene is osmF [H]

Identifier: 160901940

GI number: 160901940

Start: 496681

End: 497574

Strand: Direct

Name: osmF [H]

Synonym: Pmob_0462

Alternate gene names: 160901940

Gene position: 496681-497574 (Clockwise)

Preceding gene: 160901939

Following gene: 160901941

Centisome position: 22.89

GC content: 33.67

Gene sequence:

>894_bases
ATGAAAAAAATACTTATTTCGGTACTTATTATTTTGTTTGGTATGAACTATATCTATGCAGCTGAAAAGGTAGTTGTAGG
AGCAAAAGCTTTTACAGAAGGTTATATATTGTCAAGCATGGTTTCTTTACTTCTTCAAGGGAATGGGATTGATGTAGAAG
AAAAATTTGGACTATCCTCTTTTCCGCTACGCAAGGCCATGGAAACCGGTCAAGTTGACGCTTATGTAGATTACACAGGA
ACTGCTTGGGCAGCATATTTTAGACATACAGAAAACATATATGATCCCGAGGAACTGTTTGATTTAGTAGCAAAAGAAGA
CTTAGAGAAACACAACATCGTGTGGTTAGATATGATCAATTTTAATAATACTTATGGTTTGGCGGTACGAAGCTCTTTTG
CTAGAGAAAACGGAATACAAAGTTTAAGTGACTTGGCTGATTATATTAATTCGGGAAAAGGAAAGGATTTAATTTTTGGA
GTTAATCCAGAATATTATGAAAGAAGCGATGGAATCTTTGCGGTTATGGATACATACAATATGAATCTGCCAAAAAATAA
TGTGAGAACTATGGAAGCAGGGTTAACATATGAGGCCTTAGCACGTAAAAATATTGATGTGGCTATGATATATTCTACCG
ATGCGCAAATCTTACGTTTTGATTTAGTGATTTTAGAAGATGATAAATCTTTCTTTCCACACTACAATCCTTCCGTTTTG
GTTAGAAAGGAAACAATAGATGAATACCCTGAAATAAGAGAAATTTTAAAACCATTGACATTGTATTTAAATGAGGATAT
AATTATAAGGCTGAACTACTTGGTTGATTTTGAAGGTTTAGAACCAGAAATTGTTGCCAGAAAATATCTACAAGGTTTAG
GCCTTATTAAATAG

Upstream 100 bases:

>100_bases
ATTCACCGAAGGGGCAAAAATTGAGTGGTCACTAAAGGAATGAGAAACAGGTTTTACTGTTTCAAAGCCCATAAAAAACA
CAAAAGGAGGAATAATAAAA

Downstream 100 bases:

>100_bases
TTTACAATAATTTGTGGAGGCGTGCACCGAATTGGCTAAGGGGCCGGTCTCGAAAACCGGTGGGGTTTATCCCCTTGTGG
GTTCGAGTCCCACCGCCTCC

Product: glycine betaine ABC transporter substrate-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 297; Mature: 297

Protein sequence:

>297_residues
MKKILISVLIILFGMNYIYAAEKVVVGAKAFTEGYILSSMVSLLLQGNGIDVEEKFGLSSFPLRKAMETGQVDAYVDYTG
TAWAAYFRHTENIYDPEELFDLVAKEDLEKHNIVWLDMINFNNTYGLAVRSSFARENGIQSLSDLADYINSGKGKDLIFG
VNPEYYERSDGIFAVMDTYNMNLPKNNVRTMEAGLTYEALARKNIDVAMIYSTDAQILRFDLVILEDDKSFFPHYNPSVL
VRKETIDEYPEIREILKPLTLYLNEDIIIRLNYLVDFEGLEPEIVARKYLQGLGLIK

Sequences:

>Translated_297_residues
MKKILISVLIILFGMNYIYAAEKVVVGAKAFTEGYILSSMVSLLLQGNGIDVEEKFGLSSFPLRKAMETGQVDAYVDYTG
TAWAAYFRHTENIYDPEELFDLVAKEDLEKHNIVWLDMINFNNTYGLAVRSSFARENGIQSLSDLADYINSGKGKDLIFG
VNPEYYERSDGIFAVMDTYNMNLPKNNVRTMEAGLTYEALARKNIDVAMIYSTDAQILRFDLVILEDDKSFFPHYNPSVL
VRKETIDEYPEIREILKPLTLYLNEDIIIRLNYLVDFEGLEPEIVARKYLQGLGLIK
>Mature_297_residues
MKKILISVLIILFGMNYIYAAEKVVVGAKAFTEGYILSSMVSLLLQGNGIDVEEKFGLSSFPLRKAMETGQVDAYVDYTG
TAWAAYFRHTENIYDPEELFDLVAKEDLEKHNIVWLDMINFNNTYGLAVRSSFARENGIQSLSDLADYINSGKGKDLIFG
VNPEYYERSDGIFAVMDTYNMNLPKNNVRTMEAGLTYEALARKNIDVAMIYSTDAQILRFDLVILEDDKSFFPHYNPSVL
VRKETIDEYPEIREILKPLTLYLNEDIIIRLNYLVDFEGLEPEIVARKYLQGLGLIK

Specific function: May be part of an ABC transporter complex involved in uptake of osmoprotectant molecules [H]

COG id: COG1732

COG function: function code M; Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788452, Length=305, Percent_Identity=29.8360655737705, Blast_Score=144, Evalue=8e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007210 [H]

Pfam domain/function: PF04069 OpuAC [H]

EC number: NA

Molecular weight: Translated: 33906; Mature: 33906

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKILISVLIILFGMNYIYAAEKVVVGAKAFTEGYILSSMVSLLLQGNGIDVEEKFGLSS
CHHHHHHHHHHHHCCHHHHHHHHHEECHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCC
FPLRKAMETGQVDAYVDYTGTAWAAYFRHTENIYDPEELFDLVAKEDLEKHNIVWLDMIN
CCHHHHHHCCCCEEEEECCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEC
FNNTYGLAVRSSFARENGIQSLSDLADYINSGKGKDLIFGVNPEYYERSDGIFAVMDTYN
CCCEEEHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEECCCHHHCCCCCEEEEEEECC
MNLPKNNVRTMEAGLTYEALARKNIDVAMIYSTDAQILRFDLVILEDDKSFFPHYNPSVL
CCCCCCCCEEHHCCCCHHHHHHCCCCEEEEEECCCEEEEEEEEEEECCCCCCCCCCCCEE
VRKETIDEYPEIREILKPLTLYLNEDIIIRLNYLVDFEGLEPEIVARKYLQGLGLIK
EEHHHHHCCHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKKILISVLIILFGMNYIYAAEKVVVGAKAFTEGYILSSMVSLLLQGNGIDVEEKFGLSS
CHHHHHHHHHHHHCCHHHHHHHHHEECHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCC
FPLRKAMETGQVDAYVDYTGTAWAAYFRHTENIYDPEELFDLVAKEDLEKHNIVWLDMIN
CCHHHHHHCCCCEEEEECCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEC
FNNTYGLAVRSSFARENGIQSLSDLADYINSGKGKDLIFGVNPEYYERSDGIFAVMDTYN
CCCEEEHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEECCCHHHCCCCCEEEEEEECC
MNLPKNNVRTMEAGLTYEALARKNIDVAMIYSTDAQILRFDLVILEDDKSFFPHYNPSVL
CCCCCCCCEEHHCCCCHHHHHHCCCCEEEEEECCCEEEEEEEEEEECCCCCCCCCCCCEE
VRKETIDEYPEIREILKPLTLYLNEDIIIRLNYLVDFEGLEPEIVARKYLQGLGLIK
EEHHHHHCCHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]