| Definition | Petrotoga mobilis SJ95 chromosome, complete genome. |
|---|---|
| Accession | NC_010003 |
| Length | 2,169,548 |
Click here to switch to the map view.
The map label for this gene is 160901941
Identifier: 160901941
GI number: 160901941
Start: 497706
End: 499736
Strand: Direct
Name: 160901941
Synonym: Pmob_0463
Alternate gene names: NA
Gene position: 497706-499736 (Clockwise)
Preceding gene: 160901940
Following gene: 160901951
Centisome position: 22.94
GC content: 35.25
Gene sequence:
>2031_bases ATGCCTATTCTATCTGAACTTAATAAATACTTACAAAGTAAAATCTCACAGGGTAAAGACGATTATGCAATACCGAAAAG ATGGATGCCACCTAATTATACCGGTAAAGTTAAACTAGCTGGGAGGAAATTTTTTGTTAATCCCTATGAGTTTATATCCA ACATAATCGATAATCTATTAAAAAATGCTGGAAAAGATGTGGATTACAGCAAACCCCTTTCTTTCATTAAAAATGTTAAA GAACCTGATTGGATAAGAACGAGCATACTTTATTCTGCTCACGTACGAGCTACAGCTGCATATGTTCATGATCAAACTAC TTTATTCGTTCCAATAGATGAAAAAGGTTATACTGAATCGGGTACATTCCTAAAAATGTTGATGTTAATCCCTTATTTTT CTACGTACAAAGTCGATAGTATATACTTACTTCCAATAACTCAAGCCAGCAGTAAATTTAAAAAAGGTGAAGTTGGTTCG CCTTATGCAGTTAAAAATTTCTTCTCTGTAGAAAAAGATTATCACGACACACTTTTGGAAAATGAATTCACCCCTAATGA AGAATTTGGAGCTTTTGTCGAAGCCGCTCATATGGCTGGAATGAGAGTCTTGTTGGATTTTGTACCAAGAACAGGATCAA GGGACAATGACCTTATTTTAGAACATCCCGAATGGTTCTATTGGATAGATATAGACGAAATGAACGGTTTTGCACCTCCT AAAGTTGAAGGTCTGGGATTTGTTCAACCGAGCAAAGAAAATTTAAAAATTGTGTACAATGACGAACAAGTCAAAAATCA TCTTAAAAAATTTAGATGGGATCCAAGAACTCAGAACCCACAAAAATGGGAAAATTTTATAAAACTAAATAAAGACAACC CAGATTTTTTGGATGAAATAGCAAGAGAGTTTAAAGTAATAACCGTTCCAGGATTTTCAGATTGGATAAATGATCCCCAA CCAGCATGGGAAGATGTCACTTTCTTAAGACTCTATCTTTCTCATCCAGAAGAAGCTCTAAAATATATAGACGAGACAAA TCAACCTCCTTATGTGCTCTTCGACGTAGTTAAATCAAGTTTGTTCCCAGGGAAAGAAAAGAATGCCGAACTTTGGAACC TAATAGCAAATATTATTCCATTCTATCAAAAAAATTTCGGTATAGATGGTGCTAGGTTGGACATGGGTCACGCTCTACCT GATGAACTTGAAGCTGAAATTATAAAAAGGGCAAAAGAATACGACCCTGCCTTTGTAATCATAGCTGAAGAATTGAACAT GGACAATCATTTAAAAGCTAAAAAAAGTGGTTACGATGGAATTTTGGGAAATTCATGGTGGGCTGAGCCAAGAATAAAAG AAGGCTGGTTCAAAAAATTCATCTCAGAAGTAGCACCAAAATTATCTTTACCTACATTTGCAACGGCAGAGACACCAGAT ACCCCAAGAGCGGTTACAAGAGAAGGTGAAGAAACTTTCTCAAAATTGACAGCGGTGGTAAATACTTTCATGCCAAACGG AATAACATTTATAAACTCCGGATATGAGCTTTTTGAACCTCAACCTATGAACACAGGCTTAGATGTAGAAGATCCTGTGG AAGAAAGATTTAAAAATTTACCTTCAACAGATCAATTTTATGGCAAACTCGCATTCTTTGATTGGTATGTCCTACACTGG GATACAGACCATCATATGGTGAAATTACTTTCCTTATTAGGCACACTAAAAGAGGAAGTCAAAGATCTTTTGAAAAATTC TAACAATTACCATTTTATTGATTTTTCTGATGACGCAAGTGCGATGTTTTGGTGGAACGGAGAAAAAGGAGTTGTAATAG CTATCAATACTAACTTTAAAAATCCTTATTTCTTCGATATAGACCTTGGATATTATACCTGGAAAAGTGAGCATAACATA CAAACAAAATTGGAAAATTACAGAAGAGGCGAAAGCTCTTGGAACGTTCAGGATGCACATTTAAGAGTAACAATCAATCC AGGGGAAGCCAGAGTTTTTTTTGTATATTAA
Upstream 100 bases:
>100_bases TTGGCTAAGGGGCCGGTCTCGAAAACCGGTGGGGTTTATCCCCTTGTGGGTTCGAGTCCCACCGCCTCCGCCAATTTTTA TATGAGGAGGGAAGTAAAAG
Downstream 100 bases:
>100_bases AAAGGGCTTTTAGCCCTTTTTTACTTTAATTTTGGAAAGTTAAACTTGTCAACTTCTTGCTTTTTTATAAATTTTCTAAA CTTTTTCTTTGCTTCCTTCA
Product: alpha amylase domain-containing protein
Products: NA
Alternate protein names: Alpha-Amylase Family Protein; Maltodextrin Glycosyltransferase; Alpha-Amylase; Alpha Amylase Domain-Containing Protein; Alpha Amylase Catalytic Sub Domain Protein; Alpha Amylase Catalytic Subunit; Alpha Amylase Catalytic Sub Domain; Alpha Amylase Catalytic Domain-Containing Protein
Number of amino acids: Translated: 676; Mature: 675
Protein sequence:
>676_residues MPILSELNKYLQSKISQGKDDYAIPKRWMPPNYTGKVKLAGRKFFVNPYEFISNIIDNLLKNAGKDVDYSKPLSFIKNVK EPDWIRTSILYSAHVRATAAYVHDQTTLFVPIDEKGYTESGTFLKMLMLIPYFSTYKVDSIYLLPITQASSKFKKGEVGS PYAVKNFFSVEKDYHDTLLENEFTPNEEFGAFVEAAHMAGMRVLLDFVPRTGSRDNDLILEHPEWFYWIDIDEMNGFAPP KVEGLGFVQPSKENLKIVYNDEQVKNHLKKFRWDPRTQNPQKWENFIKLNKDNPDFLDEIAREFKVITVPGFSDWINDPQ PAWEDVTFLRLYLSHPEEALKYIDETNQPPYVLFDVVKSSLFPGKEKNAELWNLIANIIPFYQKNFGIDGARLDMGHALP DELEAEIIKRAKEYDPAFVIIAEELNMDNHLKAKKSGYDGILGNSWWAEPRIKEGWFKKFISEVAPKLSLPTFATAETPD TPRAVTREGEETFSKLTAVVNTFMPNGITFINSGYELFEPQPMNTGLDVEDPVEERFKNLPSTDQFYGKLAFFDWYVLHW DTDHHMVKLLSLLGTLKEEVKDLLKNSNNYHFIDFSDDASAMFWWNGEKGVVIAINTNFKNPYFFDIDLGYYTWKSEHNI QTKLENYRRGESSWNVQDAHLRVTINPGEARVFFVY
Sequences:
>Translated_676_residues MPILSELNKYLQSKISQGKDDYAIPKRWMPPNYTGKVKLAGRKFFVNPYEFISNIIDNLLKNAGKDVDYSKPLSFIKNVK EPDWIRTSILYSAHVRATAAYVHDQTTLFVPIDEKGYTESGTFLKMLMLIPYFSTYKVDSIYLLPITQASSKFKKGEVGS PYAVKNFFSVEKDYHDTLLENEFTPNEEFGAFVEAAHMAGMRVLLDFVPRTGSRDNDLILEHPEWFYWIDIDEMNGFAPP KVEGLGFVQPSKENLKIVYNDEQVKNHLKKFRWDPRTQNPQKWENFIKLNKDNPDFLDEIAREFKVITVPGFSDWINDPQ PAWEDVTFLRLYLSHPEEALKYIDETNQPPYVLFDVVKSSLFPGKEKNAELWNLIANIIPFYQKNFGIDGARLDMGHALP DELEAEIIKRAKEYDPAFVIIAEELNMDNHLKAKKSGYDGILGNSWWAEPRIKEGWFKKFISEVAPKLSLPTFATAETPD TPRAVTREGEETFSKLTAVVNTFMPNGITFINSGYELFEPQPMNTGLDVEDPVEERFKNLPSTDQFYGKLAFFDWYVLHW DTDHHMVKLLSLLGTLKEEVKDLLKNSNNYHFIDFSDDASAMFWWNGEKGVVIAINTNFKNPYFFDIDLGYYTWKSEHNI QTKLENYRRGESSWNVQDAHLRVTINPGEARVFFVY >Mature_675_residues PILSELNKYLQSKISQGKDDYAIPKRWMPPNYTGKVKLAGRKFFVNPYEFISNIIDNLLKNAGKDVDYSKPLSFIKNVKE PDWIRTSILYSAHVRATAAYVHDQTTLFVPIDEKGYTESGTFLKMLMLIPYFSTYKVDSIYLLPITQASSKFKKGEVGSP YAVKNFFSVEKDYHDTLLENEFTPNEEFGAFVEAAHMAGMRVLLDFVPRTGSRDNDLILEHPEWFYWIDIDEMNGFAPPK VEGLGFVQPSKENLKIVYNDEQVKNHLKKFRWDPRTQNPQKWENFIKLNKDNPDFLDEIAREFKVITVPGFSDWINDPQP AWEDVTFLRLYLSHPEEALKYIDETNQPPYVLFDVVKSSLFPGKEKNAELWNLIANIIPFYQKNFGIDGARLDMGHALPD ELEAEIIKRAKEYDPAFVIIAEELNMDNHLKAKKSGYDGILGNSWWAEPRIKEGWFKKFISEVAPKLSLPTFATAETPDT PRAVTREGEETFSKLTAVVNTFMPNGITFINSGYELFEPQPMNTGLDVEDPVEERFKNLPSTDQFYGKLAFFDWYVLHWD TDHHMVKLLSLLGTLKEEVKDLLKNSNNYHFIDFSDDASAMFWWNGEKGVVIAINTNFKNPYFFDIDLGYYTWKSEHNIQ TKLENYRRGESSWNVQDAHLRVTINPGEARVFFVY
Specific function: Unknown
COG id: COG0366
COG function: function code G; Glycosidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 78384; Mature: 78253
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPILSELNKYLQSKISQGKDDYAIPKRWMPPNYTGKVKLAGRKFFVNPYEFISNIIDNLL CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCEEECCHHHHHHHHHHHHH KNAGKDVDYSKPLSFIKNVKEPDWIRTSILYSAHVRATAAYVHDQTTLFVPIDEKGYTES HHCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHEEEEEEECCEEEEEEECCCCCCCC GTFLKMLMLIPYFSTYKVDSIYLLPITQASSKFKKGEVGSPYAVKNFFSVEKDYHDTLLE HHHHHHHHHHCCCCCEEECEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC NEFTPNEEFGAFVEAAHMAGMRVLLDFVPRTGSRDNDLILEHPEWFYWIDIDEMNGFAPP CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCEEEEEEEECCCCCCCC KVEGLGFVQPSKENLKIVYNDEQVKNHLKKFRWDPRTQNPQKWENFIKLNKDNPDFLDEI CCCCCCCCCCCCCCCEEEECCHHHHHHHHHHCCCCCCCCHHHHHHHEEECCCCHHHHHHH AREFKVITVPGFSDWINDPQPAWEDVTFLRLYLSHPEEALKYIDETNQPPYVLFDVVKSS HHCEEEEECCCCHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCEEHHHHHHHH LFPGKEKNAELWNLIANIIPFYQKNFGIDGARLDMGHALPDELEAEIIKRAKEYDPAFVI CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCHHHHHHHHHHHHHCCCEEEE IAEELNMDNHLKAKKSGYDGILGNSWWAEPRIKEGWFKKFISEVAPKLSLPTFATAETPD EEHHCCCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC TPRAVTREGEETFSKLTAVVNTFMPNGITFINSGYELFEPQPMNTGLDVEDPVEERFKNL CCHHHHCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHCC PSTDQFYGKLAFFDWYVLHWDTDHHMVKLLSLLGTLKEEVKDLLKNSNNYHFIDFSDDAS CCCHHHHHEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCC AMFWWNGEKGVVIAINTNFKNPYFFDIDLGYYTWKSEHNIQTKLENYRRGESSWNVQDAH EEEEECCCCCEEEEEECCCCCCEEEEEECCEEEECCCCCHHHHHHHHHCCCCCCCEEEEE LRVTINPGEARVFFVY EEEEECCCCEEEEEEC >Mature Secondary Structure PILSELNKYLQSKISQGKDDYAIPKRWMPPNYTGKVKLAGRKFFVNPYEFISNIIDNLL CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCEEECCHHHHHHHHHHHHH KNAGKDVDYSKPLSFIKNVKEPDWIRTSILYSAHVRATAAYVHDQTTLFVPIDEKGYTES HHCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHEEEEEEECCEEEEEEECCCCCCCC GTFLKMLMLIPYFSTYKVDSIYLLPITQASSKFKKGEVGSPYAVKNFFSVEKDYHDTLLE HHHHHHHHHHCCCCCEEECEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC NEFTPNEEFGAFVEAAHMAGMRVLLDFVPRTGSRDNDLILEHPEWFYWIDIDEMNGFAPP CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCEEEEEEEECCCCCCCC KVEGLGFVQPSKENLKIVYNDEQVKNHLKKFRWDPRTQNPQKWENFIKLNKDNPDFLDEI CCCCCCCCCCCCCCCEEEECCHHHHHHHHHHCCCCCCCCHHHHHHHEEECCCCHHHHHHH AREFKVITVPGFSDWINDPQPAWEDVTFLRLYLSHPEEALKYIDETNQPPYVLFDVVKSS HHCEEEEECCCCHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCEEHHHHHHHH LFPGKEKNAELWNLIANIIPFYQKNFGIDGARLDMGHALPDELEAEIIKRAKEYDPAFVI CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCHHHHHHHHHHHHHCCCEEEE IAEELNMDNHLKAKKSGYDGILGNSWWAEPRIKEGWFKKFISEVAPKLSLPTFATAETPD EEHHCCCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC TPRAVTREGEETFSKLTAVVNTFMPNGITFINSGYELFEPQPMNTGLDVEDPVEERFKNL CCHHHHCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHCC PSTDQFYGKLAFFDWYVLHWDTDHHMVKLLSLLGTLKEEVKDLLKNSNNYHFIDFSDDAS CCCHHHHHEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCC AMFWWNGEKGVVIAINTNFKNPYFFDIDLGYYTWKSEHNIQTKLENYRRGESSWNVQDAH EEEEECCCCCEEEEEECCCCCCEEEEEECCEEEECCCCCHHHHHHHHHCCCCCCCEEEEE LRVTINPGEARVFFVY EEEEECCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA