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The map label for this gene is yvrB [H]

Identifier: 160901530

GI number: 160901530

Start: 35637

End: 36647

Strand: Direct

Name: yvrB [H]

Synonym: Pmob_0039

Alternate gene names: 160901530

Gene position: 35637-36647 (Clockwise)

Preceding gene: 160901529

Following gene: 160901531

Centisome position: 1.64

GC content: 34.72

Gene sequence:

>1011_bases
ATGAAACAGATCAAAAAACGAGGGGAGTTTCCCCTTGTTTTATTTCTCATAATCTCGAGCTTTTTATTAATTTTACTTTT
CACATCCTTTGGGAGTGTCAAGGTTCCCGTTAAAGACATTTTCACCTCTTTAATAGCTAAAAACAACAACGATATTTACA
ACAATTTGATTTTAAACATAAGGCTTCCAAGAGTGGTTGGAAGTTTTCTTGTTGGAAGCATATTAGCAGTTTCCGGGAAT
GTTTTACAATTGGTAGTACAAAATCCCCTCGCAGATCCATACATTTTAGGAATCTCGTCAGGGGCAAGCTTTGGTGCTGT
GTTATACACCGCGTTGAGCAGTATTTATGGTCTTTCTCTTTTTCTCGGACTGGAAACTTTTTCTTTTCTTTTTGGTATCT
TAGCGACATTTATTGTTTTAATATTGGCTCGACAGGGTAAAAAACTCCCTGTTTTATCTCTAATACTAAGCGGGGTGATA
ATTAGTTTTTTGTTTAATTCTTTTACAACACTTTTTACCGTGATGTATTGGGGAAACTTAATTCACGTCAATACATGGTT
GATGGGAAGTACAGCAGATTTAATTTGGAGCGACAATTTTAAATTTATTTTTACACTTATCTTTCAATTTATTTTAGTTT
TATTATTTTCTAAACAACTGAACGTCCTTTCTATGGGGGATGACATGGCTGTATTCTCAGGGATAAACCCCGATAGATTG
AAGCTTTTTTTGATTGTAATAAACGTTTTTGCAGTATCTTTTACTGTGTCGCAGGTAGGAATAATTGGTTTTGTAGGACT
TATTATCCCTCATATAGTTCGAATGATTAAAGGGCCGTACTCGTTTGTTTCAAATTTGTATTCACTCTTCATTGGAGGAA
TGTTTTTAATGTCTGCCGATTTTGTTTCCAGAACACTATTTGCTCCAACAGAACTTCCTATCGGTGTAGTGACCTCAATA
GTAGGTGCTCCAATTTTCATTTTTGTAATGAGGAGAAAAGAGAAAATATGA

Upstream 100 bases:

>100_bases
AAGGAAAAATAGTAATGGTCGATGGTAACAAAATGCATCAAGCTTCTCCATCATTGATCGATATACTTGAACAATTATAC
GAGTATTTTGGTGAAAATAG

Downstream 100 bases:

>100_bases
TAACATTTAACAACGTCCGTTTCACTTATGGAAATGGCTTTTTTTTGAAAATCGATGATTTAAAAATAATAAAAGGAGAT
ATTATTTCTATAATTGGTCC

Product: transport system permease

Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 336; Mature: 336

Protein sequence:

>336_residues
MKQIKKRGEFPLVLFLIISSFLLILLFTSFGSVKVPVKDIFTSLIAKNNNDIYNNLILNIRLPRVVGSFLVGSILAVSGN
VLQLVVQNPLADPYILGISSGASFGAVLYTALSSIYGLSLFLGLETFSFLFGILATFIVLILARQGKKLPVLSLILSGVI
ISFLFNSFTTLFTVMYWGNLIHVNTWLMGSTADLIWSDNFKFIFTLIFQFILVLLFSKQLNVLSMGDDMAVFSGINPDRL
KLFLIVINVFAVSFTVSQVGIIGFVGLIIPHIVRMIKGPYSFVSNLYSLFIGGMFLMSADFVSRTLFAPTELPIGVVTSI
VGAPIFIFVMRRKEKI

Sequences:

>Translated_336_residues
MKQIKKRGEFPLVLFLIISSFLLILLFTSFGSVKVPVKDIFTSLIAKNNNDIYNNLILNIRLPRVVGSFLVGSILAVSGN
VLQLVVQNPLADPYILGISSGASFGAVLYTALSSIYGLSLFLGLETFSFLFGILATFIVLILARQGKKLPVLSLILSGVI
ISFLFNSFTTLFTVMYWGNLIHVNTWLMGSTADLIWSDNFKFIFTLIFQFILVLLFSKQLNVLSMGDDMAVFSGINPDRL
KLFLIVINVFAVSFTVSQVGIIGFVGLIIPHIVRMIKGPYSFVSNLYSLFIGGMFLMSADFVSRTLFAPTELPIGVVTSI
VGAPIFIFVMRRKEKI
>Mature_336_residues
MKQIKKRGEFPLVLFLIISSFLLILLFTSFGSVKVPVKDIFTSLIAKNNNDIYNNLILNIRLPRVVGSFLVGSILAVSGN
VLQLVVQNPLADPYILGISSGASFGAVLYTALSSIYGLSLFLGLETFSFLFGILATFIVLILARQGKKLPVLSLILSGVI
ISFLFNSFTTLFTVMYWGNLIHVNTWLMGSTADLIWSDNFKFIFTLIFQFILVLLFSKQLNVLSMGDDMAVFSGINPDRL
KLFLIVINVFAVSFTVSQVGIIGFVGLIIPHIVRMIKGPYSFVSNLYSLFIGGMFLMSADFVSRTLFAPTELPIGVVTSI
VGAPIFIFVMRRKEKI

Specific function: Probably part of an ABC transporter complex. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0609

COG function: function code P; ABC-type Fe3+-siderophore transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790740, Length=327, Percent_Identity=29.6636085626911, Blast_Score=124, Evalue=9e-30,
Organism=Escherichia coli, GI1790741, Length=332, Percent_Identity=28.9156626506024, Blast_Score=122, Evalue=3e-29,
Organism=Escherichia coli, GI1786347, Length=277, Percent_Identity=27.7978339350181, Blast_Score=113, Evalue=2e-26,
Organism=Escherichia coli, GI1788004, Length=282, Percent_Identity=31.5602836879433, Blast_Score=106, Evalue=2e-24,
Organism=Escherichia coli, GI1786805, Length=288, Percent_Identity=31.5972222222222, Blast_Score=104, Evalue=9e-24,
Organism=Escherichia coli, GI1786804, Length=307, Percent_Identity=27.6872964169381, Blast_Score=96, Evalue=3e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000522 [H]

Pfam domain/function: PF01032 FecCD [H]

EC number: NA

Molecular weight: Translated: 37146; Mature: 37146

Theoretical pI: Translated: 10.43; Mature: 10.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQIKKRGEFPLVLFLIISSFLLILLFTSFGSVKVPVKDIFTSLIAKNNNDIYNNLILNI
CCCCHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCHHHHEEEEE
RLPRVVGSFLVGSILAVSGNVLQLVVQNPLADPYILGISSGASFGAVLYTALSSIYGLSL
EHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHH
FLGLETFSFLFGILATFIVLILARQGKKLPVLSLILSGVIISFLFNSFTTLFTVMYWGNL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCE
IHVNTWLMGSTADLIWSDNFKFIFTLIFQFILVLLFSKQLNVLSMGDDMAVFSGINPDRL
EEEEEEEECCCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHCCCCHHHH
KLFLIVINVFAVSFTVSQVGIIGFVGLIIPHIVRMIKGPYSFVSNLYSLFIGGMFLMSAD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
FVSRTLFAPTELPIGVVTSIVGAPIFIFVMRRKEKI
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKQIKKRGEFPLVLFLIISSFLLILLFTSFGSVKVPVKDIFTSLIAKNNNDIYNNLILNI
CCCCHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCHHHHEEEEE
RLPRVVGSFLVGSILAVSGNVLQLVVQNPLADPYILGISSGASFGAVLYTALSSIYGLSL
EHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHH
FLGLETFSFLFGILATFIVLILARQGKKLPVLSLILSGVIISFLFNSFTTLFTVMYWGNL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCE
IHVNTWLMGSTADLIWSDNFKFIFTLIFQFILVLLFSKQLNVLSMGDDMAVFSGINPDRL
EEEEEEEECCCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHCCCCHHHH
KLFLIVINVFAVSFTVSQVGIIGFVGLIIPHIVRMIKGPYSFVSNLYSLFIGGMFLMSAD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
FVSRTLFAPTELPIGVVTSIVGAPIFIFVMRRKEKI
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]

Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9639930; 9384377 [H]