| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160877589
Identifier: 160877589
GI number: 160877589
Start: 5303045
End: 5303440
Strand: Direct
Name: 160877589
Synonym: Sbal195_4488
Alternate gene names: NA
Gene position: 5303045-5303440 (Clockwise)
Preceding gene: 160877588
Following gene: 160877590
Centisome position: 99.17
GC content: 44.7
Gene sequence:
>396_bases ATGACAACATCAATTAACTCAAGCCGTAAGCGCACACAACGAGATTACACCTTAGCCTTTAAATTAGGCGTTGTAGAGCG TGTTGAAAAAGGCGAAATGACGTACAAACAAGCCCAAGCCCGTTTTGGTATTCAAGGCCGTTCAACCGTGCTCGTTTGGC TTAGAAAACATGGTAGACTCAATTGGTCGAAACCTTTTCAGCATCCCCTTATGCCTAAGTCAAAAGAAACCCCTGCCGAA ACGATCAAGCGCCTTGAACGTGAGTTAGCAGAAGAGAAACTGCGTAACCAAATCCTCAATGGCATGGTTGATATCATGGA CAATGAATATGGAGCTGGCCTCAGAAAAAAGTACTTATCCGGTACGTCTGGCAAGCAAAAGGCAACGGCGAAATAA
Upstream 100 bases:
>100_bases AAGGTGCTAAAGCACCCTTTGTAAGGCGGCAGTTTAACTGCCGCCTTTTTTCTTTGGTGTGTCCCGTCCTGAAATACGTT GACATAAAGAGGACTTCTTT
Downstream 100 bases:
>100_bases ACCTGGCTGCCGCGTGTCGTGCTGCGGGTATGTCGCGGCAAGGTATTTATCAGGCAGTTGCCCGAATGGAAAGTCGTAGA GCTGAGCTATCGGTCATTAA
Product: transposase
Products: NA
Alternate protein names: ISPsy11 Transposase OrfA; Cytoplasmic Protein; Transposase OrfA; ISVisp4 Transposase OrfA
Number of amino acids: Translated: 131; Mature: 130
Protein sequence:
>131_residues MTTSINSSRKRTQRDYTLAFKLGVVERVEKGEMTYKQAQARFGIQGRSTVLVWLRKHGRLNWSKPFQHPLMPKSKETPAE TIKRLERELAEEKLRNQILNGMVDIMDNEYGAGLRKKYLSGTSGKQKATAK
Sequences:
>Translated_131_residues MTTSINSSRKRTQRDYTLAFKLGVVERVEKGEMTYKQAQARFGIQGRSTVLVWLRKHGRLNWSKPFQHPLMPKSKETPAE TIKRLERELAEEKLRNQILNGMVDIMDNEYGAGLRKKYLSGTSGKQKATAK >Mature_130_residues TTSINSSRKRTQRDYTLAFKLGVVERVEKGEMTYKQAQARFGIQGRSTVLVWLRKHGRLNWSKPFQHPLMPKSKETPAET IKRLERELAEEKLRNQILNGMVDIMDNEYGAGLRKKYLSGTSGKQKATAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15070; Mature: 14938
Theoretical pI: Translated: 10.99; Mature: 10.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTSINSSRKRTQRDYTLAFKLGVVERVEKGEMTYKQAQARFGIQGRSTVLVWLRKHGRL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCHHHHEEHHCCCC NWSKPFQHPLMPKSKETPAETIKRLERELAEEKLRNQILNGMVDIMDNEYGAGLRKKYLS CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHC GTSGKQKATAK CCCCCCCCCCC >Mature Secondary Structure TTSINSSRKRTQRDYTLAFKLGVVERVEKGEMTYKQAQARFGIQGRSTVLVWLRKHGRL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCHHHHEEHHCCCC NWSKPFQHPLMPKSKETPAETIKRLERELAEEKLRNQILNGMVDIMDNEYGAGLRKKYLS CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHC GTSGKQKATAK CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA