Click here to switch to the map view.

The map label for this gene is cc4 [H]

Identifier: 160877588

GI number: 160877588

Start: 5301644

End: 5302267

Strand: Direct

Name: cc4 [H]

Synonym: Sbal195_4487

Alternate gene names: 160877588

Gene position: 5301644-5302267 (Clockwise)

Preceding gene: 160877586

Following gene: 160877589

Centisome position: 99.15

GC content: 46.31

Gene sequence:

>624_bases
ATGAAAAAGCTAGCTCTTGCGCTGTCTGTTGTAATTGCCGCCATATCTTCACCTGCGATTGCTGAAGGTAATGCTGAAGC
GGGAAAAACGAAAATCATTGTCTGTTCAGCCTGCCATGGTATGGACGGTAACAGTATGATCGATATGTACCCTAAACTTG
CGGGCCAACACGCCACTTACCTCCAAAAGCAACTACATGATTTCCGTAGTGCAGCGCAAACTGGCGGTAAAGACGGTCGT
ATGGATCCTATCATGAGTGGCATGGCAATGCCTCTTAGCGATCAGGATATTCTCGACATTACTGCATATTTTTCTAGCCA
AGCAATCCAAGTAGCTGAAGCGAAAGATGTCCCTGAGTTAGGCGCTAAACTTTACAAAGGTGGCGATGTTTCACGTGGCA
TTACCGCTTGTATGGCATGTCATGGCCCAGATGGTAAAGGCGCAGAACTTGCAGGCTTCCCAACATTGGCTGGCCAACAC
GCCAATTACATCAAGATCCAACTGACAAAATTCCGTGAAGCGGGTCGTCATAATGATCTGAACGGCATGATGCAAGATGT
GGCTAAAAAGCTAAGCGATAGCGATATCGACGCACTATCTAAGTATCTTTCTAGCCTGAAATAA

Upstream 100 bases:

>100_bases
GTGTAAAATATTACTCCGATCACATTAATCATATTTTACCACGCTTGCGGGTCACCCTAGTAAGCTCAGGATAATAATCT
TAACCAGAAGTTGGAACGCC

Downstream 100 bases:

>100_bases
TCTTAGTCAGTTAAGAAAGGGGTGTATTACCACCCTTTTTTTACACCACCAAGTTGACGTGAACGTAAACTACATAAGAT
TCATGCTTGACATAGATCAC

Product: cytochrome c class I

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MKKLALALSVVIAAISSPAIAEGNAEAGKTKIIVCSACHGMDGNSMIDMYPKLAGQHATYLQKQLHDFRSAAQTGGKDGR
MDPIMSGMAMPLSDQDILDITAYFSSQAIQVAEAKDVPELGAKLYKGGDVSRGITACMACHGPDGKGAELAGFPTLAGQH
ANYIKIQLTKFREAGRHNDLNGMMQDVAKKLSDSDIDALSKYLSSLK

Sequences:

>Translated_207_residues
MKKLALALSVVIAAISSPAIAEGNAEAGKTKIIVCSACHGMDGNSMIDMYPKLAGQHATYLQKQLHDFRSAAQTGGKDGR
MDPIMSGMAMPLSDQDILDITAYFSSQAIQVAEAKDVPELGAKLYKGGDVSRGITACMACHGPDGKGAELAGFPTLAGQH
ANYIKIQLTKFREAGRHNDLNGMMQDVAKKLSDSDIDALSKYLSSLK
>Mature_207_residues
MKKLALALSVVIAAISSPAIAEGNAEAGKTKIIVCSACHGMDGNSMIDMYPKLAGQHATYLQKQLHDFRSAAQTGGKDGR
MDPIMSGMAMPLSDQDILDITAYFSSQAIQVAEAKDVPELGAKLYKGGDVSRGITACMACHGPDGKGAELAGFPTLAGQH
ANYIKIQLTKFREAGRHNDLNGMMQDVAKKLSDSDIDALSKYLSSLK

Specific function: Diheme, high potential cytochrome c believed to be an intermediate electron donor to terminal oxidation systems [H]

COG id: COG2863

COG function: function code C; Cytochrome c553

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 21919; Mature: 21919

Theoretical pI: Translated: 7.54; Mature: 7.54

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLALALSVVIAAISSPAIAEGNAEAGKTKIIVCSACHGMDGNSMIDMYPKLAGQHATY
CHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHCCCHHHH
LQKQLHDFRSAAQTGGKDGRMDPIMSGMAMPLSDQDILDITAYFSSQAIQVAEAKDVPEL
HHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHEEHHHHCCCHHH
GAKLYKGGDVSRGITACMACHGPDGKGAELAGFPTLAGQHANYIKIQLTKFREAGRHNDL
HHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHCCCCCCH
NGMMQDVAKKLSDSDIDALSKYLSSLK
HHHHHHHHHHHCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MKKLALALSVVIAAISSPAIAEGNAEAGKTKIIVCSACHGMDGNSMIDMYPKLAGQHATY
CHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHCCCHHHH
LQKQLHDFRSAAQTGGKDGRMDPIMSGMAMPLSDQDILDITAYFSSQAIQVAEAKDVPEL
HHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHEEHHHHCCCHHH
GAKLYKGGDVSRGITACMACHGPDGKGAELAGFPTLAGQHANYIKIQLTKFREAGRHNDL
HHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHCCCCCCH
NGMMQDVAKKLSDSDIDALSKYLSSLK
HHHHHHHHHHHCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8026750; 9032080 [H]