| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is envR [C]
Identifier: 160877580
GI number: 160877580
Start: 5291235
End: 5291882
Strand: Direct
Name: envR [C]
Synonym: Sbal195_4479
Alternate gene names: 160877580
Gene position: 5291235-5291882 (Clockwise)
Preceding gene: 160877578
Following gene: 160877581
Centisome position: 98.95
GC content: 44.6
Gene sequence:
>648_bases ATGAAAACCCGCGACAAAATAATCTATGCCAGTCTTGAACTGTTCAACGAGCATGGCGAAAGAAACATCACTACCAATCA CATTGCCGCTCACTTAAATATGAGTCCCGGGAATCTTTATTACCATTTTCGCAATAAAGAAGACATTATCCGCTGCATTT TCAGCTTATATGAGAATCATCTCGAATCGGGTTTCCAACCCTATGAAGATAAGCAAGTGGATGTGGAACTGTTAATCGGC TACTTCGATGCGATGTTCTATACCTTGTGGCAATTCCGCTTCATGTACGCCAACCTTGCGGATATTCTCGCCCGCGATGA AGAGCTAAAAAAACGCTATTTGCATGCACAGCAGCAAGTCTTAACGCGCTCGAGCCACGTGCTGCATAAACTTAAGCAAG ATGGCTTTTTAAACTTAGAGAGCGACAAAATCACGCCACTGGCAGATACCATCAAGATGATCGTCAGCTTTTGGATTGGT TACCAACTCACGCAATCCAGCACATCGACCATCACTAAAGCGACACTTTATGAAGGCGTTTTAAGGGTGCTGATGATTTT CAAAGCCTATGCAACCCCGACATCCGTCGCGACGTTTACTCGCCTAGAGCAACATTACCACGCGCTAGCGAGTCAAGAAT CTCTATAA
Upstream 100 bases:
>100_bases GTTAGCATATGCACCAAATTAGGGATAATTTACCAGCAGTATGGCGGTCGTTGGTTAACTCTATCTATGATGTGGCGTTC ACTAGCAATTTGGATAACTT
Downstream 100 bases:
>100_bases CGTCATCCCAAACGACTATGTTGGGAACTCGCATTCGGAACTAAACTCAAAGCAATTATAGTACTGAGTGCGAGCCCGTT TTTCGCTCTACACCTCTTAA
Product: TetR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Transcriptional Regulator PhaD; Transcriptional Regulator TetR Family Protein; Regulatory Protein TetR; TetR Family Regulatory Protein; Transcriptional Reguator TetR Family; HTH-Type Transcriptional Regulator TetR-Family; HTH-Type Transcriptional Regulator; Regulatory Protein Tetr; Transcriptional Regulator Tetr Family; Transcriptional Regulator Transcription Regulator Protein; TetR/AcrR Family Transcriptional Regulator
Number of amino acids: Translated: 215; Mature: 215
Protein sequence:
>215_residues MKTRDKIIYASLELFNEHGERNITTNHIAAHLNMSPGNLYYHFRNKEDIIRCIFSLYENHLESGFQPYEDKQVDVELLIG YFDAMFYTLWQFRFMYANLADILARDEELKKRYLHAQQQVLTRSSHVLHKLKQDGFLNLESDKITPLADTIKMIVSFWIG YQLTQSSTSTITKATLYEGVLRVLMIFKAYATPTSVATFTRLEQHYHALASQESL
Sequences:
>Translated_215_residues MKTRDKIIYASLELFNEHGERNITTNHIAAHLNMSPGNLYYHFRNKEDIIRCIFSLYENHLESGFQPYEDKQVDVELLIG YFDAMFYTLWQFRFMYANLADILARDEELKKRYLHAQQQVLTRSSHVLHKLKQDGFLNLESDKITPLADTIKMIVSFWIG YQLTQSSTSTITKATLYEGVLRVLMIFKAYATPTSVATFTRLEQHYHALASQESL >Mature_215_residues MKTRDKIIYASLELFNEHGERNITTNHIAAHLNMSPGNLYYHFRNKEDIIRCIFSLYENHLESGFQPYEDKQVDVELLIG YFDAMFYTLWQFRFMYANLADILARDEELKKRYLHAQQQVLTRSSHVLHKLKQDGFLNLESDKITPLADTIKMIVSFWIG YQLTQSSTSTITKATLYEGVLRVLMIFKAYATPTSVATFTRLEQHYHALASQESL
Specific function: Potential Regulator Protein For The Acref/Envcd Genes. [C]
COG id: COG1309
COG function: function code K; Transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25158; Mature: 25158
Theoretical pI: Translated: 7.09; Mature: 7.09
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTRDKIIYASLELFNEHGERNITTNHIAAHLNMSPGNLYYHFRNKEDIIRCIFSLYENH CCCCHHHHHHHHHHHHHCCCCCCCHHHHEEEEECCCCCEEEEECCHHHHHHHHHHHHHHH LESGFQPYEDKQVDVELLIGYFDAMFYTLWQFRFMYANLADILARDEELKKRYLHAQQQV HHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH LTRSSHVLHKLKQDGFLNLESDKITPLADTIKMIVSFWIGYQLTQSSTSTITKATLYEGV HHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH LRVLMIFKAYATPTSVATFTRLEQHYHALASQESL HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKTRDKIIYASLELFNEHGERNITTNHIAAHLNMSPGNLYYHFRNKEDIIRCIFSLYENH CCCCHHHHHHHHHHHHHCCCCCCCHHHHEEEEECCCCCEEEEECCHHHHHHHHHHHHHHH LESGFQPYEDKQVDVELLIGYFDAMFYTLWQFRFMYANLADILARDEELKKRYLHAQQQV HHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH LTRSSHVLHKLKQDGFLNLESDKITPLADTIKMIVSFWIGYQLTQSSTSTITKATLYEGV HHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH LRVLMIFKAYATPTSVATFTRLEQHYHALASQESL HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA