| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160877355
Identifier: 160877355
GI number: 160877355
Start: 5032429
End: 5033013
Strand: Reverse
Name: 160877355
Synonym: Sbal195_4253
Alternate gene names: NA
Gene position: 5033013-5032429 (Counterclockwise)
Preceding gene: 160877357
Following gene: 160877351
Centisome position: 94.12
GC content: 48.72
Gene sequence:
>585_bases ATGCCACTTAAAATCGACCGTTTGAACCTTATGCTGGGTCTTGCCATTGTACTGAGCGTGTTTTCGTCCTCCTCAGTCAT GGCCGCTAAGGTCAGTTTCAAGGAATTTTGCCCACAGTTTGTCGGTCAGTGGGCGGGTGATGCTGCCAAGGCGGGGGAGA TTCCGAGAAAAGTGGCCGTCACGGGCTTTTGCTCCCACGATCAGCGCCAGTTGATTTTATCTGTGAGTATCGGCACGAGG GCGCCCTTTAGCGAAACTTGGTGGTTTAGGGAAGAAGGCGACCAAGTATTACTGACCTATTACGACGGTGTGGCAGAAGA TAAACAGCAAGTCTTTAGTTTATATCGACAAAATGGGGATTATTCCCTGCTAGGGGAAGGCGTTGTTAATGCTAGACCCG CTTTGATCCAGTTACTCTTTGATGCTCAAACTCAAACTCAAACTCAAACTCAAACTCAGGCTCAGGCTCAAAATCAAGCG GGTGGATGGCAATGGACGCAGAACATCCAATATCTCGATGATGATATCGACCGCTATCAGCTGTTTCGTGGGATAGAGAT GACGCCTGTCGCACCATCTCATTAA
Upstream 100 bases:
>100_bases CGTTCATTCCGTCGTTAAAGGAATCGTTTGTGATGGGGGATTTGTCGATTGATGCTTTTAACGCTAATGTATTGATCTGT TTCGGGTAGGTGTTAGAGAT
Downstream 100 bases:
>100_bases GCCGCTTCATTGATACCCGAACGGGCAGTTTTGATTATGTAGTACAACCTTGGCTGGATACCCATGCAATTCATTTTGGG ATAGAAGAACGTTAAATATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 194; Mature: 193
Protein sequence:
>194_residues MPLKIDRLNLMLGLAIVLSVFSSSSVMAAKVSFKEFCPQFVGQWAGDAAKAGEIPRKVAVTGFCSHDQRQLILSVSIGTR APFSETWWFREEGDQVLLTYYDGVAEDKQQVFSLYRQNGDYSLLGEGVVNARPALIQLLFDAQTQTQTQTQTQAQAQNQA GGWQWTQNIQYLDDDIDRYQLFRGIEMTPVAPSH
Sequences:
>Translated_194_residues MPLKIDRLNLMLGLAIVLSVFSSSSVMAAKVSFKEFCPQFVGQWAGDAAKAGEIPRKVAVTGFCSHDQRQLILSVSIGTR APFSETWWFREEGDQVLLTYYDGVAEDKQQVFSLYRQNGDYSLLGEGVVNARPALIQLLFDAQTQTQTQTQTQAQAQNQA GGWQWTQNIQYLDDDIDRYQLFRGIEMTPVAPSH >Mature_193_residues PLKIDRLNLMLGLAIVLSVFSSSSVMAAKVSFKEFCPQFVGQWAGDAAKAGEIPRKVAVTGFCSHDQRQLILSVSIGTRA PFSETWWFREEGDQVLLTYYDGVAEDKQQVFSLYRQNGDYSLLGEGVVNARPALIQLLFDAQTQTQTQTQTQAQAQNQAG GWQWTQNIQYLDDDIDRYQLFRGIEMTPVAPSH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21758; Mature: 21627
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLKIDRLNLMLGLAIVLSVFSSSSVMAAKVSFKEFCPQFVGQWAGDAAKAGEIPRKVAV CCCCHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHCCCCHHCCCCCCEEEE TGFCSHDQRQLILSVSIGTRAPFSETWWFREEGDQVLLTYYDGVAEDKQQVFSLYRQNGD EECCCCCCEEEEEEEECCCCCCCCCCCCEECCCCEEEEEEECCCCHHHHHHHHHHHCCCC YSLLGEGVVNARPALIQLLFDAQTQTQTQTQTQAQAQNQAGGWQWTQNIQYLDDDIDRYQ EEEECCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEECCCCHHHHHHHHHHH LFRGIEMTPVAPSH HHHCCCCCCCCCCC >Mature Secondary Structure PLKIDRLNLMLGLAIVLSVFSSSSVMAAKVSFKEFCPQFVGQWAGDAAKAGEIPRKVAV CCCHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHCCCCHHCCCCCCEEEE TGFCSHDQRQLILSVSIGTRAPFSETWWFREEGDQVLLTYYDGVAEDKQQVFSLYRQNGD EECCCCCCEEEEEEEECCCCCCCCCCCCEECCCCEEEEEEECCCCHHHHHHHHHHHCCCC YSLLGEGVVNARPALIQLLFDAQTQTQTQTQTQAQAQNQAGGWQWTQNIQYLDDDIDRYQ EEEECCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEECCCCHHHHHHHHHHH LFRGIEMTPVAPSH HHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA