| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160877357
Identifier: 160877357
GI number: 160877357
Start: 5035447
End: 5036925
Strand: Reverse
Name: 160877357
Synonym: Sbal195_4255
Alternate gene names: NA
Gene position: 5036925-5035447 (Counterclockwise)
Preceding gene: 160877358
Following gene: 160877355
Centisome position: 94.2
GC content: 48.82
Gene sequence:
>1479_bases ATGAAATCAACGGCAGCGAAATCGACAGCAATGAAATCACTTAAGATGGCATCACTCGGGAAACCTTCTAAGTTAATGGC CGCATTAGCCCTAGGCACAAGTTTAGCCTTAGCGGGTTGTGCTACGACATCGGCGCCAAAACGCGTCGATACTGGCAGCT TTGTGATGCCAAGTTACGACAAGTTCGTGCTGGATAACGGCTTAACTGTGTATTTTATGCCGCAGCGCGAAGTGCCTTTA GTGACCTTAAATGCCGTGGTACGTGCGGGTGCGGTCAATGACACCACTGCAGGCGTGGCGCAAATGACGGCAGAAGGTTT GTTGTTAGGGGCGGCGGGTAAATCTAAGGCGGATATCGAGCAGCAAGTGGATTTTCTCGGTGCAAGTTTAGGCGCGGAAG CGGATAAAGAAGGCAGCTATCTCAGCGCCGATTTTATGGCGAAAGACACTGATGTCATGCTGGGCTTATTTAGCGCGGCG ATGTTAACGCCAGACTTTGACGCCGCCGAGTTCGATAAACTCAAGCAACGCGCGATTGCGGGATTACAGCAAGATAAAGA AAGCCCACGGGCTGTGATTGGCCGTTACTTCGATAAGCTGGTATTTGGTGCCCATCCTTATGGTAATGCGGCTTCGGGTA ACAGCGATTCGCTTGAGCAAGTGACAGTGTCGCAACTGCGCGCTTTCCATAAGAGTTACTACCAACCGGCCAATACAGCG ATTACCGTCGTGGGTGACTTTGATGTTGCTGCGATGAAGGCCAAGCTGACACAAACCTTTGGTCAGTGGAAAGGCAGCGA AAAGTTGGTGCAGCCTGACTTAAATCAAGGCTTGCCTCAGTTAACTGCGGCTAAAGTTTTGCTGGTGGATAAACCCGATG CCATCGAAACCACCTTTGTGATCGGCGGTTTAGGCATTAGTCGTGACAATCCAGACTATGTTGGTTTAACGGTAGTGAAC ACTATTTTAGGTGGTCGTTTTACCTCTTGGCTTAACGACGAGCTGCGGGTAAACGCAGGCTTAACCTATGGCGCACGCTC AGGTTTTAGCCCTTATACCGACTCGGGTGTGTTTACTATCAGCACTTTCACTAAGACGGAAACCACTCAAGAAGCGATTG ATCTCGCACTGAAAACCTATGCTCGTTTATGGGAGAAAGGCGTAGATCAAACCACCTTAGATTCGGCTAAAGCCTATGTG AAAGGTCAGTTCCCACCTAAGTTTGAAACATCAGGCCAACTGGCGGGATTGTTGTCAGGCATGTATCTGTATGGCTTCGA TGATAAGTTTATCAATGAGTTCCAAGCTAAGGTGGATGGTTTGACCTTAGAAGAAACCCAAAGACTGGTGAAAACTTACT TCCCGCAAAAAGATCTGCAATTTGTGCTGATTGGCAACGCGGCTAAGATTGCACCTATCGCCGCTAAGTATGGCAAAGTG CAAACCGTGGATATTAAAGCCACGGGCTTTGGCCAATAA
Upstream 100 bases:
>100_bases ACAAGGTGACGCCAGCGGATATTCAACGTGTTGCCCAAACCTATTTACGTAAATCGAATCGCACTGTAGCTGTGCTGGCG GCAAACGAGGAGATCTCTAA
Downstream 100 bases:
>100_bases GCTCAGTCATTTCAAGCTAAGTCATTTCAAACTAAGGCGTTAGCCTACGCTTTAGTTTAAGTAAACCCATTAAAAAGGTC TGCATTGCAGACCTTTTTTG
Product: peptidase M16 domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 492; Mature: 492
Protein sequence:
>492_residues MKSTAAKSTAMKSLKMASLGKPSKLMAALALGTSLALAGCATTSAPKRVDTGSFVMPSYDKFVLDNGLTVYFMPQREVPL VTLNAVVRAGAVNDTTAGVAQMTAEGLLLGAAGKSKADIEQQVDFLGASLGAEADKEGSYLSADFMAKDTDVMLGLFSAA MLTPDFDAAEFDKLKQRAIAGLQQDKESPRAVIGRYFDKLVFGAHPYGNAASGNSDSLEQVTVSQLRAFHKSYYQPANTA ITVVGDFDVAAMKAKLTQTFGQWKGSEKLVQPDLNQGLPQLTAAKVLLVDKPDAIETTFVIGGLGISRDNPDYVGLTVVN TILGGRFTSWLNDELRVNAGLTYGARSGFSPYTDSGVFTISTFTKTETTQEAIDLALKTYARLWEKGVDQTTLDSAKAYV KGQFPPKFETSGQLAGLLSGMYLYGFDDKFINEFQAKVDGLTLEETQRLVKTYFPQKDLQFVLIGNAAKIAPIAAKYGKV QTVDIKATGFGQ
Sequences:
>Translated_492_residues MKSTAAKSTAMKSLKMASLGKPSKLMAALALGTSLALAGCATTSAPKRVDTGSFVMPSYDKFVLDNGLTVYFMPQREVPL VTLNAVVRAGAVNDTTAGVAQMTAEGLLLGAAGKSKADIEQQVDFLGASLGAEADKEGSYLSADFMAKDTDVMLGLFSAA MLTPDFDAAEFDKLKQRAIAGLQQDKESPRAVIGRYFDKLVFGAHPYGNAASGNSDSLEQVTVSQLRAFHKSYYQPANTA ITVVGDFDVAAMKAKLTQTFGQWKGSEKLVQPDLNQGLPQLTAAKVLLVDKPDAIETTFVIGGLGISRDNPDYVGLTVVN TILGGRFTSWLNDELRVNAGLTYGARSGFSPYTDSGVFTISTFTKTETTQEAIDLALKTYARLWEKGVDQTTLDSAKAYV KGQFPPKFETSGQLAGLLSGMYLYGFDDKFINEFQAKVDGLTLEETQRLVKTYFPQKDLQFVLIGNAAKIAPIAAKYGKV QTVDIKATGFGQ >Mature_492_residues MKSTAAKSTAMKSLKMASLGKPSKLMAALALGTSLALAGCATTSAPKRVDTGSFVMPSYDKFVLDNGLTVYFMPQREVPL VTLNAVVRAGAVNDTTAGVAQMTAEGLLLGAAGKSKADIEQQVDFLGASLGAEADKEGSYLSADFMAKDTDVMLGLFSAA MLTPDFDAAEFDKLKQRAIAGLQQDKESPRAVIGRYFDKLVFGAHPYGNAASGNSDSLEQVTVSQLRAFHKSYYQPANTA ITVVGDFDVAAMKAKLTQTFGQWKGSEKLVQPDLNQGLPQLTAAKVLLVDKPDAIETTFVIGGLGISRDNPDYVGLTVVN TILGGRFTSWLNDELRVNAGLTYGARSGFSPYTDSGVFTISTFTKTETTQEAIDLALKTYARLWEKGVDQTTLDSAKAYV KGQFPPKFETSGQLAGLLSGMYLYGFDDKFINEFQAKVDGLTLEETQRLVKTYFPQKDLQFVLIGNAAKIAPIAAKYGKV QTVDIKATGFGQ
Specific function: Unknown
COG id: COG0612
COG function: function code R; Predicted Zn-dependent peptidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M16 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011249 - InterPro: IPR011237 - InterPro: IPR007863 [H]
Pfam domain/function: PF05193 Peptidase_M16_C [H]
EC number: NA
Molecular weight: Translated: 52696; Mature: 52696
Theoretical pI: Translated: 6.59; Mature: 6.59
Prosite motif: PS00079 MULTICOPPER_OXIDASE1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSTAAKSTAMKSLKMASLGKPSKLMAALALGTSLALAGCATTSAPKRVDTGSFVMPSYD CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCC KFVLDNGLTVYFMPQREVPLVTLNAVVRAGAVNDTTAGVAQMTAEGLLLGAAGKSKADIE CEEECCCCEEEEECCCCCCEEEHHHHHHCCCCCCCHHHHHHHHHCCEEEECCCCCHHHHH QQVDFLGASLGAEADKEGSYLSADFMAKDTDVMLGLFSAAMLTPDFDAAEFDKLKQRAIA HHHHHHHHHCCCCCCCCCCEEEHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH GLQQDKESPRAVIGRYFDKLVFGAHPYGNAASGNSDSLEQVTVSQLRAFHKSYYQPANTA HHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCE ITVVGDFDVAAMKAKLTQTFGQWKGSEKLVQPDLNQGLPQLTAAKVLLVDKPDAIETTFV EEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCHHHEEEEEECCCCCCEEEEE IGGLGISRDNPDYVGLTVVNTILGGRFTSWLNDELRVNAGLTYGARSGFSPYTDSGVFTI EECCCCCCCCCCEEHHHHHHHHHCCHHHHHCCCCEEEECCEEECCCCCCCCCCCCCEEEE STFTKTETTQEAIDLALKTYARLWEKGVDQTTLDSAKAYVKGQFPPKFETSGQLAGLLSG EEECCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHEECCCCCCCCCCCHHHHHHCC MYLYGFDDKFINEFQAKVDGLTLEETQRLVKTYFPQKDLQFVLIGNAAKIAPIAAKYGKV CEEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHCCCE QTVDIKATGFGQ EEEEEEECCCCC >Mature Secondary Structure MKSTAAKSTAMKSLKMASLGKPSKLMAALALGTSLALAGCATTSAPKRVDTGSFVMPSYD CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCC KFVLDNGLTVYFMPQREVPLVTLNAVVRAGAVNDTTAGVAQMTAEGLLLGAAGKSKADIE CEEECCCCEEEEECCCCCCEEEHHHHHHCCCCCCCHHHHHHHHHCCEEEECCCCCHHHHH QQVDFLGASLGAEADKEGSYLSADFMAKDTDVMLGLFSAAMLTPDFDAAEFDKLKQRAIA HHHHHHHHHCCCCCCCCCCEEEHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH GLQQDKESPRAVIGRYFDKLVFGAHPYGNAASGNSDSLEQVTVSQLRAFHKSYYQPANTA HHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCE ITVVGDFDVAAMKAKLTQTFGQWKGSEKLVQPDLNQGLPQLTAAKVLLVDKPDAIETTFV EEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCHHHEEEEEECCCCCCEEEEE IGGLGISRDNPDYVGLTVVNTILGGRFTSWLNDELRVNAGLTYGARSGFSPYTDSGVFTI EECCCCCCCCCCEEHHHHHHHHHCCHHHHHCCCCEEEECCEEECCCCCCCCCCCCCEEEE STFTKTETTQEAIDLALKTYARLWEKGVDQTTLDSAKAYVKGQFPPKFETSGQLAGLLSG EEECCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHEECCCCCCCCCCCHHHHHHCC MYLYGFDDKFINEFQAKVDGLTLEETQRLVKTYFPQKDLQFVLIGNAAKIAPIAAKYGKV CEEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHCCCE QTVDIKATGFGQ EEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]