| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160877261
Identifier: 160877261
GI number: 160877261
Start: 4922807
End: 4923643
Strand: Reverse
Name: 160877261
Synonym: Sbal195_4158
Alternate gene names: NA
Gene position: 4923643-4922807 (Counterclockwise)
Preceding gene: 160877266
Following gene: 160877260
Centisome position: 92.08
GC content: 51.25
Gene sequence:
>837_bases ATGAAGATCATAGTCGTATTTATACTGATTGCTGTCGGGGTGTTTTTATTCCTTCGCGCGCAGCGATTGGCGAAAGAAGA ACAAGAGGCGATGAAACCCAAGTCGACCACGGTAAAACCTGTTGTTCCTTCCGAAGAGGCACCTATTTCCTCCGCTGCTG AACCCGAGCGCGTAGAGCCTGAGCCAGTTGAGCAGGCTGAGGACACTCGCGTGGTGGAAGTTGAGCCTGTCATCGAAGTA GAAGCCGAATTGATGCCCCGTGAGACGAATGAACCGGCGAACATTTCGGTGGAACTAGACACAGATATCATCGAAGTCGA TATTCCTGCGGCTCATAATGAAGAGGCGGTGATCATTTTAGGCACCACGCCAACAAATGAACAAGCTGACGTTAAGACTG AAGCTGAGCCTGCATCGAGCACGCGCTCAGAGGTCGGTGCGCCAGGGGCTTGGGCGAATGTAACCTTAGTTCGGGCCTTT GAAGAGTATCAAGGGGCAACGTCAGCCAGTGCTCGCTATACCGCGCTGCAAAATATGGTCGCTGAGTGCTACAAGCGGCG TAAATCTGCGGATTATCTCAACTATGGTGCTCAGTTAGCTGAAGAGTATGTCGCATTGTTCCAAGCGGCTAGCGCCGAGC AAGGCAAAGATACTGAGCTTAAGTCTTCCGGTTTCTTGCATTTAGCCACCTTGCTAAATGATACCCAAGCCTTCGATGCC GCTATTGTCATTTGCCGTAAAGCATTAGAGCTTGGGCTGAGCGATGGCACTGTCACTGGCTTTGAGGGCCGGATAAATCG GATTGAGAAAGCACAGGCTAAAGCAGCCACGGCTTAA
Upstream 100 bases:
>100_bases TTTTAGCTAGACTCGGTTGCCATGGACACTGTCCTAATGGATTTTGGCAAACCCATTGACACGGCTTCTGACGAGAAGCG GCCATCAAAGGTGAACAAGA
Downstream 100 bases:
>100_bases CACTTTGGCTGGGAGCGCTTAGCGGGTAAATCCTTAAACGAAAAGCGGTTATTTCCCTCGTCTAAGCAGTGTAGAATCCC TGCTAACTGAATGCGCAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 278; Mature: 278
Protein sequence:
>278_residues MKIIVVFILIAVGVFLFLRAQRLAKEEQEAMKPKSTTVKPVVPSEEAPISSAAEPERVEPEPVEQAEDTRVVEVEPVIEV EAELMPRETNEPANISVELDTDIIEVDIPAAHNEEAVIILGTTPTNEQADVKTEAEPASSTRSEVGAPGAWANVTLVRAF EEYQGATSASARYTALQNMVAECYKRRKSADYLNYGAQLAEEYVALFQAASAEQGKDTELKSSGFLHLATLLNDTQAFDA AIVICRKALELGLSDGTVTGFEGRINRIEKAQAKAATA
Sequences:
>Translated_278_residues MKIIVVFILIAVGVFLFLRAQRLAKEEQEAMKPKSTTVKPVVPSEEAPISSAAEPERVEPEPVEQAEDTRVVEVEPVIEV EAELMPRETNEPANISVELDTDIIEVDIPAAHNEEAVIILGTTPTNEQADVKTEAEPASSTRSEVGAPGAWANVTLVRAF EEYQGATSASARYTALQNMVAECYKRRKSADYLNYGAQLAEEYVALFQAASAEQGKDTELKSSGFLHLATLLNDTQAFDA AIVICRKALELGLSDGTVTGFEGRINRIEKAQAKAATA >Mature_278_residues MKIIVVFILIAVGVFLFLRAQRLAKEEQEAMKPKSTTVKPVVPSEEAPISSAAEPERVEPEPVEQAEDTRVVEVEPVIEV EAELMPRETNEPANISVELDTDIIEVDIPAAHNEEAVIILGTTPTNEQADVKTEAEPASSTRSEVGAPGAWANVTLVRAF EEYQGATSASARYTALQNMVAECYKRRKSADYLNYGAQLAEEYVALFQAASAEQGKDTELKSSGFLHLATLLNDTQAFDA AIVICRKALELGLSDGTVTGFEGRINRIEKAQAKAATA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30107; Mature: 30107
Theoretical pI: Translated: 4.26; Mature: 4.26
Prosite motif: PS00307 LECTIN_LEGUME_BETA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIIVVFILIAVGVFLFLRAQRLAKEEQEAMKPKSTTVKPVVPSEEAPISSAAEPERVEP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCCCC EPVEQAEDTRVVEVEPVIEVEAELMPRETNEPANISVELDTDIIEVDIPAAHNEEAVIIL CCCCCCCCCEEEEECCHHHHHHHHCCCCCCCCCEEEEEECCEEEEEECCCCCCCCEEEEE GTTPTNEQADVKTEAEPASSTRSEVGAPGAWANVTLVRAFEEYQGATSASARYTALQNMV ECCCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHH AECYKRRKSADYLNYGAQLAEEYVALFQAASAEQGKDTELKSSGFLHLATLLNDTQAFDA HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEHHHHHCCHHHHHH AIVICRKALELGLSDGTVTGFEGRINRIEKAQAKAATA HHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MKIIVVFILIAVGVFLFLRAQRLAKEEQEAMKPKSTTVKPVVPSEEAPISSAAEPERVEP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCCCC EPVEQAEDTRVVEVEPVIEVEAELMPRETNEPANISVELDTDIIEVDIPAAHNEEAVIIL CCCCCCCCCEEEEECCHHHHHHHHCCCCCCCCCEEEEEECCEEEEEECCCCCCCCEEEEE GTTPTNEQADVKTEAEPASSTRSEVGAPGAWANVTLVRAFEEYQGATSASARYTALQNMV ECCCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHH AECYKRRKSADYLNYGAQLAEEYVALFQAASAEQGKDTELKSSGFLHLATLLNDTQAFDA HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEHHHHHCCHHHHHH AIVICRKALELGLSDGTVTGFEGRINRIEKAQAKAATA HHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA