| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is ilvK [H]
Identifier: 160877249
GI number: 160877249
Start: 4913322
End: 4914413
Strand: Reverse
Name: ilvK [H]
Synonym: Sbal195_4146
Alternate gene names: 160877249
Gene position: 4914413-4913322 (Counterclockwise)
Preceding gene: 160877252
Following gene: 160877241
Centisome position: 91.9
GC content: 48.9
Gene sequence:
>1092_bases ATGGAAATAACTTACAATTTAAAACCTGCGTCCGAGCGCCGTACTGAGCAATTCAAGCCCGAGGGGAATGTGGGCTTTGG TAGCCTCAGAACCGATCATATGTTTTTGATGGATTATCATGACGGACAATGGTGCGATCCGCGCATCGTTCCTTATGGTC CATTTGAAATGGCACCGGGTGCAATGGCGTTGCATTATGGCCAGTCGATCTTCGAAGGCGCGAAAGCCTTTATGCACGAA GATGGCGAGATTTATACTTTCCGCATTAATAAGAATGCCGAGCGGATGAATCGCTCCGCCGATATCGTCTGTATTCCTAA TATCGATGAACAAGTGCAGATGGATGCGATCAATGCGTTGATCGATGTCGATCGCCTGTGGTTCCCGATGCAAGAAGGTG CGTGTCTGTATATTCGCCCCTTTATTTTTGCGACCGAAGACCGTCTCTCTGTTAGCCCAAGCACGCGTTATACCTTCTGT GTGGTATTAAGCCCAAGTGGTGCTTATTACGCAGCGGGCGTGAACAAAGGCATACGCTTATTGATCAGCAAAACTTTCCA TCGCGCGGTATCGGGTGGCACTGGTGCCTCAAAAGCGGCGGGTAACTATGCGGCGTCGTTGCGTGCGGGTAAAGCCGCGG CAGCCTTTGGTGCATCGCAAGTGTTATATCTCGACTCGACCAATCAACAGATTGAAGAAGCGGGCGCGATGAACCATTTC CACATATTAAAAGATGGCACTGTGATCATTCCGACCTTCACCGATACCATTCTTAAGTCGATCACCTCGCAATCCATCAT GGAATTGGGTGAGATGCTTGGTTGTGAAGTGCGCCAAGAGACTGTCATGCTTGATCAATTTATCGCCGATATCGAATCTG GTGAAATTATCGAAGCGGGTGGTTTCGGGACTGCGGCTGTGGTTTCAGCTGTGGGTTCCTACATTTTTGAAGATGGCCAC ATAGTCACTGTCGGTAATGGTGAAGTGGGCGAGCATGTTCAGCGCATCTACAAACTGTATACCGAAATCCAAAAGGGCCA CATTCAAGGTCCTGAAGGCTGGGTTAAGCGTGTTGAACGTTTAGCAAAGTAA
Upstream 100 bases:
>100_bases CCTGCATCTTCAGATTGTTTGGGTATAGATATGCGCGCCCCTCTTGACTTTATTCCTGTCGCTCCCTAGTCTGCTTGTTC AGTAATCAAGGTGGTATGCG
Downstream 100 bases:
>100_bases GGATGTTGTGGTGATGATTAAAGGCTCCTAGGAGCCTTTTTTATTGGCTATTTTTGACGATGACATTTGTAGGCTTCGCC TCAAATCAAACCAAATCAAA
Product: branched-chain amino acid aminotransferase
Products: NA
Alternate protein names: BCAT 2; Vegetative protein 85; VEG85 [H]
Number of amino acids: Translated: 363; Mature: 363
Protein sequence:
>363_residues MEITYNLKPASERRTEQFKPEGNVGFGSLRTDHMFLMDYHDGQWCDPRIVPYGPFEMAPGAMALHYGQSIFEGAKAFMHE DGEIYTFRINKNAERMNRSADIVCIPNIDEQVQMDAINALIDVDRLWFPMQEGACLYIRPFIFATEDRLSVSPSTRYTFC VVLSPSGAYYAAGVNKGIRLLISKTFHRAVSGGTGASKAAGNYAASLRAGKAAAAFGASQVLYLDSTNQQIEEAGAMNHF HILKDGTVIIPTFTDTILKSITSQSIMELGEMLGCEVRQETVMLDQFIADIESGEIIEAGGFGTAAVVSAVGSYIFEDGH IVTVGNGEVGEHVQRIYKLYTEIQKGHIQGPEGWVKRVERLAK
Sequences:
>Translated_363_residues MEITYNLKPASERRTEQFKPEGNVGFGSLRTDHMFLMDYHDGQWCDPRIVPYGPFEMAPGAMALHYGQSIFEGAKAFMHE DGEIYTFRINKNAERMNRSADIVCIPNIDEQVQMDAINALIDVDRLWFPMQEGACLYIRPFIFATEDRLSVSPSTRYTFC VVLSPSGAYYAAGVNKGIRLLISKTFHRAVSGGTGASKAAGNYAASLRAGKAAAAFGASQVLYLDSTNQQIEEAGAMNHF HILKDGTVIIPTFTDTILKSITSQSIMELGEMLGCEVRQETVMLDQFIADIESGEIIEAGGFGTAAVVSAVGSYIFEDGH IVTVGNGEVGEHVQRIYKLYTEIQKGHIQGPEGWVKRVERLAK >Mature_363_residues MEITYNLKPASERRTEQFKPEGNVGFGSLRTDHMFLMDYHDGQWCDPRIVPYGPFEMAPGAMALHYGQSIFEGAKAFMHE DGEIYTFRINKNAERMNRSADIVCIPNIDEQVQMDAINALIDVDRLWFPMQEGACLYIRPFIFATEDRLSVSPSTRYTFC VVLSPSGAYYAAGVNKGIRLLISKTFHRAVSGGTGASKAAGNYAASLRAGKAAAAFGASQVLYLDSTNQQIEEAGAMNHF HILKDGTVIIPTFTDTILKSITSQSIMELGEMLGCEVRQETVMLDQFIADIESGEIIEAGGFGTAAVVSAVGSYIFEDGH IVTVGNGEVGEHVQRIYKLYTEIQKGHIQGPEGWVKRVERLAK
Specific function: Transaminates branched-chain amino acids and ketoglutarate [H]
COG id: COG0115
COG function: function code EH; Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI50658084, Length=328, Percent_Identity=35.3658536585366, Blast_Score=204, Evalue=9e-53, Organism=Homo sapiens, GI296010904, Length=338, Percent_Identity=35.5029585798817, Blast_Score=189, Evalue=5e-48, Organism=Homo sapiens, GI38176287, Length=338, Percent_Identity=35.5029585798817, Blast_Score=189, Evalue=5e-48, Organism=Homo sapiens, GI296010906, Length=338, Percent_Identity=35.5029585798817, Blast_Score=188, Evalue=5e-48, Organism=Homo sapiens, GI258614015, Length=285, Percent_Identity=35.0877192982456, Blast_Score=166, Evalue=3e-41, Organism=Homo sapiens, GI296010902, Length=337, Percent_Identity=30.8605341246291, Blast_Score=145, Evalue=7e-35, Organism=Homo sapiens, GI296010900, Length=338, Percent_Identity=30.7692307692308, Blast_Score=144, Evalue=9e-35, Organism=Escherichia coli, GI48994963, Length=324, Percent_Identity=30.8641975308642, Blast_Score=118, Evalue=5e-28, Organism=Caenorhabditis elegans, GI17568601, Length=372, Percent_Identity=31.7204301075269, Blast_Score=180, Evalue=1e-45, Organism=Caenorhabditis elegans, GI17565728, Length=351, Percent_Identity=34.7578347578348, Blast_Score=168, Evalue=4e-42, Organism=Saccharomyces cerevisiae, GI6322608, Length=315, Percent_Identity=33.015873015873, Blast_Score=169, Evalue=7e-43, Organism=Saccharomyces cerevisiae, GI6322002, Length=373, Percent_Identity=30.0268096514745, Blast_Score=167, Evalue=2e-42, Organism=Drosophila melanogaster, GI24641779, Length=349, Percent_Identity=33.5243553008596, Blast_Score=184, Evalue=8e-47,
Paralogues:
None
Copy number: 2342 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 11,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001544 - InterPro: IPR018300 - InterPro: IPR005786 [H]
Pfam domain/function: PF01063 Aminotran_4 [H]
EC number: =2.6.1.42 [H]
Molecular weight: Translated: 39991; Mature: 39991
Theoretical pI: Translated: 5.25; Mature: 5.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEITYNLKPASERRTEQFKPEGNVGFGSLRTDHMFLMDYHDGQWCDPRIVPYGPFEMAPG CEEEEECCCCHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEECCCCCHHCCCC AMALHYGQSIFEGAKAFMHEDGEIYTFRINKNAERMNRSADIVCIPNIDEQVQMDAINAL HHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHCCCCCCEEEECCCCHHHHHHHHHHH IDVDRLWFPMQEGACLYIRPFIFATEDRLSVSPSTRYTFCVVLSPSGAYYAAGVNKGIRL HHHHHHCCCCCCCCEEEEEEEEEEECCCEECCCCCCEEEEEEECCCCCEEEECCCCCHHH LISKTFHRAVSGGTGASKAAGNYAASLRAGKAAAAFGASQVLYLDSTNQQIEEAGAMNHF HHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCHHHHCCCCEEEEEECCCHHHHHHCCCCEE HILKDGTVIIPTFTDTILKSITSQSIMELGEMLGCEVRQETVMLDQFIADIESGEIIEAG EEEECCCEEEECHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEC GFGTAAVVSAVGSYIFEDGHIVTVGNGEVGEHVQRIYKLYTEIQKGHIQGPEGWVKRVER CCCHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH LAK HCC >Mature Secondary Structure MEITYNLKPASERRTEQFKPEGNVGFGSLRTDHMFLMDYHDGQWCDPRIVPYGPFEMAPG CEEEEECCCCHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEECCCCCHHCCCC AMALHYGQSIFEGAKAFMHEDGEIYTFRINKNAERMNRSADIVCIPNIDEQVQMDAINAL HHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHCCCCCCEEEECCCCHHHHHHHHHHH IDVDRLWFPMQEGACLYIRPFIFATEDRLSVSPSTRYTFCVVLSPSGAYYAAGVNKGIRL HHHHHHCCCCCCCCEEEEEEEEEEECCCEECCCCCCEEEEEEECCCCCEEEECCCCCHHH LISKTFHRAVSGGTGASKAAGNYAASLRAGKAAAAFGASQVLYLDSTNQQIEEAGAMNHF HHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCHHHHCCCCEEEEEECCCHHHHHHCCCCEE HILKDGTVIIPTFTDTILKSITSQSIMELGEMLGCEVRQETVMLDQFIADIESGEIIEAG EEEECCCEEEECHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEC GFGTAAVVSAVGSYIFEDGHIVTVGNGEVGEHVQRIYKLYTEIQKGHIQGPEGWVKRVER CCCHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH LAK HCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377; 7934828; 9298659 [H]