| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is ilvA [H]
Identifier: 160877229
GI number: 160877229
Start: 4881171
End: 4882766
Strand: Reverse
Name: ilvA [H]
Synonym: Sbal195_4125
Alternate gene names: 160877229
Gene position: 4882766-4881171 (Counterclockwise)
Preceding gene: 160877230
Following gene: 160877228
Centisome position: 91.31
GC content: 52.19
Gene sequence:
>1596_bases ATGTTGCCACTTGCATCGCAAGCTCGGACGGATTTAGCACATTTTCAGTTGGCACAAAGCTATCTGCAAAAAATCCTGTT GTCATCTGTGTATGACATAGCGAAAGTGACGCCGCTTTCAAGCATGAACAAGTTATCGGCGCGTTTAGGTTGTCAGGTAT TTTTGAAGCGCGAAGATATGCAGCCAGTGCATTCCTTCAAGTTACGCGGTGCCTATAACCGTATCGCCCAGCTGACGAAA GAAGAATGTCAGCGCGGTGTGGTGTGTGCTTCGGCAGGCAATCATGCTCAGGGTGTGGCGATGTCGGCGGCGAGTCGCGG CGTGGATGCTGTAATTGTGATGCCTGAGACGACGCCCGATATTAAAGTCGATGCGGTGCGCCGTTTAGGTGGCAACGTGG TATTGCACGGCCAAGCCTTCGATCAAGCCAATGGCTATGCGATGGCGATGGCTAAAGAAGAGGGCCGAGTCTATATCGCG CCCTTTGATGATGAAGCAGTGATCGCAGGCCAAGGCACTATCGCCCAAGAGATGTTGCAGCAGCAGCGCGATCTCGAAGT GGTATTTGTGCCCGTGGGCGGCGGCGGTTTAATCGCGGGTATCGCAGCCTATTACAAGGCGGTGATGCCGCAGGTAAAAA TTGTCGGCGTCGAGCCTGAAGATGCCGCCTGTTTAAAGGCGGCGATGGAAGCGGGCGAGCCGGTGACACTGGCGCAAGTT GGTTTATTTGCCGACGGCGTGGCGGTAAAGCGTATTGGCACTGAGCCATTTCGAGTCGCCAAACTGTATGTCGATGAAGT GGTCACTGTGACCTCGGATGAAATCTGCGCTGCGGTGAAAGATATCTTCGAAGATACCCGTGCGATTGCTGAACCCGCTG GGGCTTTGTCCTTGGCTGGGCTTAAAAAATATGTCAGCGCCAATGCCAGTGGCAACAGCGGTAAAGGCGAGAAAGTCGCC GCGATTTTGAGTGGCGCGAATGTGAATTTCCACAGCCTGCGTTATGTGTCTGAACGCTGCGAACTCGGTGAGCAAAAAGA AGCAGTACTGGCAGTGAAAGTCCCTGAACGTCCGGGAAGTTTCTTAAAATTCTGTGAGTTACTCGATAAGCGGGTGATGA CAGAGTTCAACTATCGTTTCAGCAGTCGCGATCTGGCCGTGGTGTTTGCTGGCATTCGCCTAAGCAGAGGCCAAGGCGAG CTTGAACAAATCATCGCTACCTTAGAGGCTAACGATTTTGAAGTGCAGGATTTATCCGGCGATGAAACCGCGAAATTGCA TGTGCGCTATATGGTCGGCGGCCATCCACCTGAGCCTTTAGAAGAGCGTTTGTTTAGCTTCGAATTCCCCGAACATCCCG GTGCGCTGCTGAAGTTTTTAACCACCCTGCAGAGCAAATGGAACATTAGTCTGTTCCATTATCGCAACCACGGCGCGGCC TTTGGCCGAGTGCTGGCGGGATTTGAAGTACCCGCGAGCGATGCTTTGCCGTTCCAACAGTTTTTAACTGAGTTGGGTTT TGTCTATCAAGAGGAAACCCAAAGTCCTGCCTATCAGCTGTTTTTAAATGCGGGTAACGGCAGCAAAGTCTTATAG
Upstream 100 bases:
>100_bases CGCCAACGTTATGTATCACTCGCGCTTAAGGCCTACGCCATGCTCGCTACCAGTGCCGACAAGGGCGCGGTGCGCGATCG CAGTAAACTGGAGGACTAAT
Downstream 100 bases:
>100_bases GGTTTGCGGTGATGCACGTAGCTTACGACGCGATGACATGTTAGGCAAAGTTAGGCACAAGTTAAGTCAAAGTTAGGCTA AAGGAGGGGCGCACATGCGC
Product: threonine dehydratase
Products: NA
Alternate protein names: Threonine deaminase [H]
Number of amino acids: Translated: 531; Mature: 531
Protein sequence:
>531_residues MLPLASQARTDLAHFQLAQSYLQKILLSSVYDIAKVTPLSSMNKLSARLGCQVFLKREDMQPVHSFKLRGAYNRIAQLTK EECQRGVVCASAGNHAQGVAMSAASRGVDAVIVMPETTPDIKVDAVRRLGGNVVLHGQAFDQANGYAMAMAKEEGRVYIA PFDDEAVIAGQGTIAQEMLQQQRDLEVVFVPVGGGGLIAGIAAYYKAVMPQVKIVGVEPEDAACLKAAMEAGEPVTLAQV GLFADGVAVKRIGTEPFRVAKLYVDEVVTVTSDEICAAVKDIFEDTRAIAEPAGALSLAGLKKYVSANASGNSGKGEKVA AILSGANVNFHSLRYVSERCELGEQKEAVLAVKVPERPGSFLKFCELLDKRVMTEFNYRFSSRDLAVVFAGIRLSRGQGE LEQIIATLEANDFEVQDLSGDETAKLHVRYMVGGHPPEPLEERLFSFEFPEHPGALLKFLTTLQSKWNISLFHYRNHGAA FGRVLAGFEVPASDALPFQQFLTELGFVYQEETQSPAYQLFLNAGNGSKVL
Sequences:
>Translated_531_residues MLPLASQARTDLAHFQLAQSYLQKILLSSVYDIAKVTPLSSMNKLSARLGCQVFLKREDMQPVHSFKLRGAYNRIAQLTK EECQRGVVCASAGNHAQGVAMSAASRGVDAVIVMPETTPDIKVDAVRRLGGNVVLHGQAFDQANGYAMAMAKEEGRVYIA PFDDEAVIAGQGTIAQEMLQQQRDLEVVFVPVGGGGLIAGIAAYYKAVMPQVKIVGVEPEDAACLKAAMEAGEPVTLAQV GLFADGVAVKRIGTEPFRVAKLYVDEVVTVTSDEICAAVKDIFEDTRAIAEPAGALSLAGLKKYVSANASGNSGKGEKVA AILSGANVNFHSLRYVSERCELGEQKEAVLAVKVPERPGSFLKFCELLDKRVMTEFNYRFSSRDLAVVFAGIRLSRGQGE LEQIIATLEANDFEVQDLSGDETAKLHVRYMVGGHPPEPLEERLFSFEFPEHPGALLKFLTTLQSKWNISLFHYRNHGAA FGRVLAGFEVPASDALPFQQFLTELGFVYQEETQSPAYQLFLNAGNGSKVL >Mature_531_residues MLPLASQARTDLAHFQLAQSYLQKILLSSVYDIAKVTPLSSMNKLSARLGCQVFLKREDMQPVHSFKLRGAYNRIAQLTK EECQRGVVCASAGNHAQGVAMSAASRGVDAVIVMPETTPDIKVDAVRRLGGNVVLHGQAFDQANGYAMAMAKEEGRVYIA PFDDEAVIAGQGTIAQEMLQQQRDLEVVFVPVGGGGLIAGIAAYYKAVMPQVKIVGVEPEDAACLKAAMEAGEPVTLAQV GLFADGVAVKRIGTEPFRVAKLYVDEVVTVTSDEICAAVKDIFEDTRAIAEPAGALSLAGLKKYVSANASGNSGKGEKVA AILSGANVNFHSLRYVSERCELGEQKEAVLAVKVPERPGSFLKFCELLDKRVMTEFNYRFSSRDLAVVFAGIRLSRGQGE LEQIIATLEANDFEVQDLSGDETAKLHVRYMVGGHPPEPLEERLFSFEFPEHPGALLKFLTTLQSKWNISLFHYRNHGAA FGRVLAGFEVPASDALPFQQFLTELGFVYQEETQSPAYQLFLNAGNGSKVL
Specific function: Catalyzes the formation of alpha-ketobutyrate from threonine in a two-step reaction. The first step is a dehydration of threonine, followed by rehydration and liberation of ammonia [H]
COG id: COG1171
COG function: function code E; Threonine dehydratase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the serine/threonine dehydratase family [H]
Homologues:
Organism=Homo sapiens, GI11345492, Length=337, Percent_Identity=32.0474777448071, Blast_Score=159, Evalue=9e-39, Organism=Homo sapiens, GI19923959, Length=311, Percent_Identity=32.7974276527331, Blast_Score=106, Evalue=5e-23, Organism=Homo sapiens, GI33469958, Length=310, Percent_Identity=28.7096774193548, Blast_Score=103, Evalue=5e-22, Organism=Homo sapiens, GI295821202, Length=225, Percent_Identity=31.1111111111111, Blast_Score=75, Evalue=2e-13, Organism=Homo sapiens, GI295821200, Length=225, Percent_Identity=31.1111111111111, Blast_Score=75, Evalue=2e-13, Organism=Homo sapiens, GI4557415, Length=225, Percent_Identity=31.1111111111111, Blast_Score=75, Evalue=2e-13, Organism=Escherichia coli, GI1790207, Length=503, Percent_Identity=60.0397614314115, Blast_Score=593, Evalue=1e-171, Organism=Escherichia coli, GI1789505, Length=306, Percent_Identity=37.5816993464052, Blast_Score=181, Evalue=1e-46, Organism=Escherichia coli, GI1789235, Length=268, Percent_Identity=25.7462686567164, Blast_Score=70, Evalue=4e-13, Organism=Escherichia coli, GI2367138, Length=206, Percent_Identity=27.1844660194175, Blast_Score=63, Evalue=5e-11, Organism=Caenorhabditis elegans, GI71991565, Length=380, Percent_Identity=33.1578947368421, Blast_Score=163, Evalue=2e-40, Organism=Caenorhabditis elegans, GI17537387, Length=324, Percent_Identity=32.7160493827161, Blast_Score=140, Evalue=2e-33, Organism=Caenorhabditis elegans, GI17508781, Length=282, Percent_Identity=29.0780141843972, Blast_Score=117, Evalue=2e-26, Organism=Saccharomyces cerevisiae, GI6320930, Length=533, Percent_Identity=49.53095684803, Blast_Score=476, Evalue=1e-135, Organism=Saccharomyces cerevisiae, GI6322631, Length=303, Percent_Identity=35.973597359736, Blast_Score=165, Evalue=1e-41, Organism=Saccharomyces cerevisiae, GI6319788, Length=297, Percent_Identity=25.5892255892256, Blast_Score=91, Evalue=6e-19, Organism=Saccharomyces cerevisiae, GI6321594, Length=215, Percent_Identity=28.3720930232558, Blast_Score=64, Evalue=5e-11, Organism=Drosophila melanogaster, GI21355833, Length=319, Percent_Identity=34.7962382445141, Blast_Score=147, Evalue=1e-35, Organism=Drosophila melanogaster, GI24645328, Length=255, Percent_Identity=34.5098039215686, Blast_Score=106, Evalue=4e-23, Organism=Drosophila melanogaster, GI24643623, Length=220, Percent_Identity=28.1818181818182, Blast_Score=76, Evalue=6e-14, Organism=Drosophila melanogaster, GI20129101, Length=220, Percent_Identity=28.1818181818182, Blast_Score=76, Evalue=6e-14,
Paralogues:
None
Copy number: 1344 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001926 - InterPro: IPR000634 - InterPro: IPR005787 - InterPro: IPR001721 [H]
Pfam domain/function: PF00291 PALP; PF00585 Thr_dehydrat_C [H]
EC number: =4.3.1.19 [H]
Molecular weight: Translated: 57586; Mature: 57586
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: PS00165 DEHYDRATASE_SER_THR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPLASQARTDLAHFQLAQSYLQKILLSSVYDIAKVTPLSSMNKLSARLGCQVFLKREDM CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCEEEEECCCC QPVHSFKLRGAYNRIAQLTKEECQRGVVCASAGNHAQGVAMSAASRGVDAVIVMPETTPD CHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCHHHHHHCCCCCEEEEECCCCCC IKVDAVRRLGGNVVLHGQAFDQANGYAMAMAKEEGRVYIAPFDDEAVIAGQGTIAQEMLQ CCHHHHHHCCCCEEEEECCCCCCCCEEEEEEECCCEEEEEECCCCEEEECCCHHHHHHHH QQRDLEVVFVPVGGGGLIAGIAAYYKAVMPQVKIVGVEPEDAACLKAAMEAGEPVTLAQV HCCCCEEEEEEECCCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHCCCCEEEHHH GLFADGVAVKRIGTEPFRVAKLYVDEVVTVTSDEICAAVKDIFEDTRAIAEPAGALSLAG HHHHCCEEEEECCCCCHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHH LKKYVSANASGNSGKGEKVAAILSGANVNFHSLRYVSERCELGEQKEAVLAVKVPERPGS HHHHHHCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCH FLKFCELLDKRVMTEFNYRFSSRDLAVVFAGIRLSRGQGELEQIIATLEANDFEVQDLSG HHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEECCCCHHHHHHHHHCCCCEEEEECCC DETAKLHVRYMVGGHPPEPLEERLFSFEFPEHPGALLKFLTTLQSKWNISLFHYRNHGAA CCEEEEEEEEEECCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCHH FGRVLAGFEVPASDALPFQQFLTELGFVYQEETQSPAYQLFLNAGNGSKVL HHHHHHCCCCCCCCCCCHHHHHHHHCCEEHHCCCCCEEEEEEECCCCCCCC >Mature Secondary Structure MLPLASQARTDLAHFQLAQSYLQKILLSSVYDIAKVTPLSSMNKLSARLGCQVFLKREDM CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCEEEEECCCC QPVHSFKLRGAYNRIAQLTKEECQRGVVCASAGNHAQGVAMSAASRGVDAVIVMPETTPD CHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCHHHHHHCCCCCEEEEECCCCCC IKVDAVRRLGGNVVLHGQAFDQANGYAMAMAKEEGRVYIAPFDDEAVIAGQGTIAQEMLQ CCHHHHHHCCCCEEEEECCCCCCCCEEEEEEECCCEEEEEECCCCEEEECCCHHHHHHHH QQRDLEVVFVPVGGGGLIAGIAAYYKAVMPQVKIVGVEPEDAACLKAAMEAGEPVTLAQV HCCCCEEEEEEECCCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHCCCCEEEHHH GLFADGVAVKRIGTEPFRVAKLYVDEVVTVTSDEICAAVKDIFEDTRAIAEPAGALSLAG HHHHCCEEEEECCCCCHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHH LKKYVSANASGNSGKGEKVAAILSGANVNFHSLRYVSERCELGEQKEAVLAVKVPERPGS HHHHHHCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCH FLKFCELLDKRVMTEFNYRFSSRDLAVVFAGIRLSRGQGELEQIIATLEANDFEVQDLSG HHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEECCCCHHHHHHHHHCCCCEEEEECCC DETAKLHVRYMVGGHPPEPLEERLFSFEFPEHPGALLKFLTTLQSKWNISLFHYRNHGAA CCEEEEEEEEEECCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCHH FGRVLAGFEVPASDALPFQQFLTELGFVYQEETQSPAYQLFLNAGNGSKVL HHHHHHCCCCCCCCCCCHHHHHHHHCCEEHHCCCCCEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11248100 [H]