Click here to switch to the map view.

The map label for this gene is yqhA [C]

Identifier: 160876955

GI number: 160876955

Start: 4534732

End: 4535226

Strand: Direct

Name: yqhA [C]

Synonym: Sbal195_3851

Alternate gene names: 160876955

Gene position: 4534732-4535226 (Clockwise)

Preceding gene: 160876952

Following gene: 160876956

Centisome position: 84.8

GC content: 41.62

Gene sequence:

>495_bases
ATGGAACAAATATTTGAAAAATTGATGTATGCATCTCGCTGGATTATGGCGCCGATTTACTTGGGATTAAGCCTAGTCCT
AATCGGTTTAGGCATTAAATTCTTCCAAGAGATCTTCCATATTCTGCCGATCATTTTCGAGATAACCGAAGTGGATCTGG
TGCTGGTCACCCTATCCCTGATTGATATCACCCTAGTGGGTGGCCTTATCGTGATGGTGATGTTTTCTGGCTATGAAAAC
TTCGTGTCACAATTAGATGTGGGCGAAGACAGTGAGAAGCTCAGTTGGCTCGGTAAGTTAGATTCTGGCTCATTAAAAAA
CAAAGTCGCCGCTTCTATTGTGGCTATTTCATCTATACACCTGCTGAAAATCTTTATGGATGTGAAGAATATCGATAACG
ATAAAATCATGTGGTACCTATTAATCCACATCACCTTTGTGTTGTCAGCCTTTGCCATGGGCTATTTAGACAAAATGACC
CGCGCTGGTAAGTAG

Upstream 100 bases:

>100_bases
ACCCTAGGGCTATCGCGCGCCTAAAATGCGCTATGTTACTGTTTTAGTCATTGGCAACTCGATTTTTTACCGCATTTTTA
GATTAAGGGTTAAATGGAAT

Downstream 100 bases:

>100_bases
CAAGTTCGAGCCTTAGTAAGTGGAGCGATCACGGTGTTAACGCTGTGGAAGGTTTTGAGAGCAAAACCTAAACGAAGATA
ACGTTTCATTCGTTTCTGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MEQIFEKLMYASRWIMAPIYLGLSLVLIGLGIKFFQEIFHILPIIFEITEVDLVLVTLSLIDITLVGGLIVMVMFSGYEN
FVSQLDVGEDSEKLSWLGKLDSGSLKNKVAASIVAISSIHLLKIFMDVKNIDNDKIMWYLLIHITFVLSAFAMGYLDKMT
RAGK

Sequences:

>Translated_164_residues
MEQIFEKLMYASRWIMAPIYLGLSLVLIGLGIKFFQEIFHILPIIFEITEVDLVLVTLSLIDITLVGGLIVMVMFSGYEN
FVSQLDVGEDSEKLSWLGKLDSGSLKNKVAASIVAISSIHLLKIFMDVKNIDNDKIMWYLLIHITFVLSAFAMGYLDKMT
RAGK
>Mature_164_residues
MEQIFEKLMYASRWIMAPIYLGLSLVLIGLGIKFFQEIFHILPIIFEITEVDLVLVTLSLIDITLVGGLIVMVMFSGYEN
FVSQLDVGEDSEKLSWLGKLDSGSLKNKVAASIVAISSIHLLKIFMDVKNIDNDKIMWYLLIHITFVLSAFAMGYLDKMT
RAGK

Specific function: Unknown

COG id: COG2862

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0114 family

Homologues:

Organism=Escherichia coli, GI1789376, Length=161, Percent_Identity=70.1863354037267, Blast_Score=236, Evalue=7e-64,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y3668_SHEB2 (B8EB95)

Other databases:

- EMBL:   CP001252
- RefSeq:   YP_002359569.1
- GeneID:   7089602
- GenomeReviews:   CP001252_GR
- KEGG:   sbp:Sbal223_3668
- HOGENOM:   HBG474035
- OMA:   MVIIGGY
- ProtClustDB:   PRK05208
- HAMAP:   MF_00143
- InterPro:   IPR005134
- InterPro:   IPR020761
- InterPro:   IPR020765
- TIGRFAMs:   TIGR00645

Pfam domain/function: PF03350 UPF0114

EC number: NA

Molecular weight: Translated: 18497; Mature: 18497

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x208ed744)-; HASH(0x219a9d2c)-; HASH(0x218a3738)-; HASH(0x220ae514)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQIFEKLMYASRWIMAPIYLGLSLVLIGLGIKFFQEIFHILPIIFEITEVDLVLVTLSL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IDITLVGGLIVMVMFSGYENFVSQLDVGEDSEKLSWLGKLDSGSLKNKVAASIVAISSIH
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
LLKIFMDVKNIDNDKIMWYLLIHITFVLSAFAMGYLDKMTRAGK
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
>Mature Secondary Structure
MEQIFEKLMYASRWIMAPIYLGLSLVLIGLGIKFFQEIFHILPIIFEITEVDLVLVTLSL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IDITLVGGLIVMVMFSGYENFVSQLDVGEDSEKLSWLGKLDSGSLKNKVAASIVAISSIH
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
LLKIFMDVKNIDNDKIMWYLLIHITFVLSAFAMGYLDKMTRAGK
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA