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The map label for this gene is 160876952

Identifier: 160876952

GI number: 160876952

Start: 4531681

End: 4532385

Strand: Direct

Name: 160876952

Synonym: Sbal195_3848

Alternate gene names: NA

Gene position: 4531681-4532385 (Clockwise)

Preceding gene: 160876951

Following gene: 160876955

Centisome position: 84.75

GC content: 45.39

Gene sequence:

>705_bases
ATGCGGTTTGTAAAACCCAAAAGCGTTGAGCAGCAAGATGTGCAACTGCTCCACCGCATGCGCGAACGATTAACTAAACA
ATCAACCGCCTTAATCAATCAAGTCAGAGGGATGTTAGCGGAATACGGCATTGTGATAACCAAAAGTAAATCGGCTTTTA
AAGTACAGTTTCCAGATATTTTAGCGGATGAAACCAATGCGCTGACTACCAAAGGTCGGGCCATTTTTTATCAGTTATAT
GAAGAGTTTAGTGATATAGAAAAACGGCTTAAGGGTTGTGACGTTCAAGTGCTCACTGAAACTAAGAACAATGTGATTTG
CCAGCGTTTAGAAACTATCCCAGGTATTGGTCCAGTCACCGCTACCGCCTTTTATGCCGCCGCAGGTGATGGTAAAGATT
TCAGTAATGGTAGACACTTTTCAGCTTGGTGTGGCTTGGTTCCCAAGCAACACAGCTGTGGAGGTAAAGATAACCTCCTT
GGAATAAGCAAGCGGGGAAATGCTTACTTACGTACCCTGTTCATCCACGGCGCCAGAGCTGTGTTACAGCACAGTTGTCA
TAAACAGGATAAATTTAGTTGCTGGGCAATCCAGTTAGCAGAACGCCGAGGTTTTAACCGAGCCTGTGTAGCCGTCGCCA
ATAAACTCGCGAGAATGGCATGGGTTATCGCGGCGCATGACGAAGAATATCGACTTCCAGTATAG

Upstream 100 bases:

>100_bases
TTGAGCTGTTGGGCCATAACGTCAAGCTAATCGCACCTCAATTTGTGGTGCCTACTACAACGATGCGCTAGCCATCGCTG
AAGCTGCGCAGCGACCCAAC

Downstream 100 bases:

>100_bases
TGCTGAATAGATTCAATAAACGTTAATAATTAACCAACCAGCAAGTTGCTAAGACACTTGAATTGATGATGAGACAGTCA
GACTGATCTACTGAAAACCT

Product: transposase IS116/IS110/IS902 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MRFVKPKSVEQQDVQLLHRMRERLTKQSTALINQVRGMLAEYGIVITKSKSAFKVQFPDILADETNALTTKGRAIFYQLY
EEFSDIEKRLKGCDVQVLTETKNNVICQRLETIPGIGPVTATAFYAAAGDGKDFSNGRHFSAWCGLVPKQHSCGGKDNLL
GISKRGNAYLRTLFIHGARAVLQHSCHKQDKFSCWAIQLAERRGFNRACVAVANKLARMAWVIAAHDEEYRLPV

Sequences:

>Translated_234_residues
MRFVKPKSVEQQDVQLLHRMRERLTKQSTALINQVRGMLAEYGIVITKSKSAFKVQFPDILADETNALTTKGRAIFYQLY
EEFSDIEKRLKGCDVQVLTETKNNVICQRLETIPGIGPVTATAFYAAAGDGKDFSNGRHFSAWCGLVPKQHSCGGKDNLL
GISKRGNAYLRTLFIHGARAVLQHSCHKQDKFSCWAIQLAERRGFNRACVAVANKLARMAWVIAAHDEEYRLPV
>Mature_234_residues
MRFVKPKSVEQQDVQLLHRMRERLTKQSTALINQVRGMLAEYGIVITKSKSAFKVQFPDILADETNALTTKGRAIFYQLY
EEFSDIEKRLKGCDVQVLTETKNNVICQRLETIPGIGPVTATAFYAAAGDGKDFSNGRHFSAWCGLVPKQHSCGGKDNLL
GISKRGNAYLRTLFIHGARAVLQHSCHKQDKFSCWAIQLAERRGFNRACVAVANKLARMAWVIAAHDEEYRLPV

Specific function: Required for the transposition of the insertion element (Potential) [H]

COG id: COG3547

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase IS1111A/IS1328/IS1533 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003346
- InterPro:   IPR002525 [H]

Pfam domain/function: PF02371 Transposase_20; PF01548 Transposase_9 [H]

EC number: NA

Molecular weight: Translated: 26302; Mature: 26302

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFVKPKSVEQQDVQLLHRMRERLTKQSTALINQVRGMLAEYGIVITKSKSAFKVQFPDI
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCEEEEECCHH
LADETNALTTKGRAIFYQLYEEFSDIEKRLKGCDVQVLTETKNNVICQRLETIPGIGPVT
HCCCCCCHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCCCCHH
ATAFYAAAGDGKDFSNGRHFSAWCGLVPKQHSCGGKDNLLGISKRGNAYLRTLFIHGARA
HHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHH
VLQHSCHKQDKFSCWAIQLAERRGFNRACVAVANKLARMAWVIAAHDEEYRLPV
HHHHHHCCCCCCHHHHEEEHHHCCCCHHHHHHHHHHHHHHHHEEECCCCCCCCC
>Mature Secondary Structure
MRFVKPKSVEQQDVQLLHRMRERLTKQSTALINQVRGMLAEYGIVITKSKSAFKVQFPDI
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCEEEEECCHH
LADETNALTTKGRAIFYQLYEEFSDIEKRLKGCDVQVLTETKNNVICQRLETIPGIGPVT
HCCCCCCHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCCCCHH
ATAFYAAAGDGKDFSNGRHFSAWCGLVPKQHSCGGKDNLLGISKRGNAYLRTLFIHGARA
HHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHH
VLQHSCHKQDKFSCWAIQLAERRGFNRACVAVANKLARMAWVIAAHDEEYRLPV
HHHHHHCCCCCCHHHHEEEHHHCCCCHHHHHHHHHHHHHHHHEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1324903; 12704232 [H]