Definition Shewanella baltica OS195 chromosome, complete genome.
Accession NC_009997
Length 5,347,283

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The map label for this gene is 160876879

Identifier: 160876879

GI number: 160876879

Start: 4449121

End: 4450398

Strand: Direct

Name: 160876879

Synonym: Sbal195_3775

Alternate gene names: NA

Gene position: 4449121-4450398 (Clockwise)

Preceding gene: 160876876

Following gene: 160876882

Centisome position: 83.2

GC content: 48.04

Gene sequence:

>1278_bases
ATGAAACTACGCCCTATTTCGTCGCTCTCACTCGGCCTGTTAATTGCCACCAGCGCTTTATTAGCTGGTTGCAATAGTGA
CGATAACAACACAGAAGTCACGCCACCCGCTAGCAAACCTGTTCCAGCTCAAGTGGGAGAAAGACCTTTATTTCTCGTGC
GTCAAATGCAAGACAGCGCACTTAAAACCCGCTTAGAGCAATGCACCACTGACAATTTTTATCGCAGCGAGTTTTCCATC
GGTCACCGTGGCGCTGCGATGCAATTTCCTGAGCATACAAAGGAATCCTACCAAGCTGCTATCGATTCTGGCGCTGGCAT
AGTTGAATGTGATGTCACCTTCACCGCTGATAAAGCCTTAGTTTGCCGCCACTCACAGTGCGATCTTGCCAGCACGACCA
ACATTTTAGCCGTGCCTGAACTGGCTAATAAATGTTCGAGCCCATTCACTCCTGCTGATGCCGCCAATGGCGTCAGCGCA
TCGGCGACCTGTTGCACCAGCGATATCACCCTCGCCGAATTTAAAACCCTCAAGGGTAAAATGGAAGGCAGCAATCCTAA
AGCGACCACTGCGGCCGAATTCATCAATGGCACTCCAAGCTGGCGCACCGATCTCTACGCTGGCAATGGCACCTTGATGA
CCCATGCCGAAAGTATTGAAATGTTTAAAAAAGCTGGCGTGAAGATGACGCCAGAGCTCAAAGCCGCCAGCGTATCTATG
CCATTCGATGGTTTTACTCAGCAGGATTACGCGCAAAAAATGTTAGATGAATACACGGCGGCTGGCGTCGATGCTTCGCA
AGTATTCCCTCAATCATTTATCTTAGATGACATCAAATATTGGGTCGCCAACGCACCCGAGTTTGCGAAACAAGCCGTAT
TTCTCGATGACAGATACGATTATAACAGCGCTTTCGATCCACAAAATTCAGCCACTTGGTCACCATCAATGGCGGATTTG
AAGACCCAAGGTGTCGAAATTATTGCGCCACCACTCTGGGTTTTAGTCGCCTTAGATGCGGATAAGAAAATCATTCCTTC
GGAATACGCTAAGGCCGCCAAAGACGCGGGGCTTAAGATCATCACTTGGTCGCTGGAACGTTCTGGTTTATTAAAAAATG
GCGGCGGCTTTTATTATCAAAGCATTACCGAAGCCATAGATAATGAAGGCGATACCTTTGAATTACTCGATGTGTTAGCT
AAAGATGTCGGTGTGATTGGGGTATTCTCCGACTGGCCCGCCACTGTGACTTACTATGCTAACTGTATGGATTTATAA

Upstream 100 bases:

>100_bases
TCTTGTTTATGTCATAAAAATAGGCTTTTTCAGTCACATTAACACTTTAGAGTTTCTGATTAATATTAATAATTTACATC
ATTACTCATAGGTAAATCTG

Downstream 100 bases:

>100_bases
GTCGTCGATATAGAAAACAAAAAATGCGTTAACGATTGCTCGTTAACGCATTTTTTTATTGCGAAAATAGTCTATATCTC
GCCGCGAGCAAGCTATTTAA

Product: glycerophosphoryl diester phosphodiesterase

Products: NA

Alternate protein names: Glycerophosphoryl Diester Phosphodiesterase Family Protein; Glycerophosphoryl Diester Phosphodiesterase Family; Glycerophosphodiesterase; Glycerophosphoryl Diester Phosphodiesterase Periplasmic

Number of amino acids: Translated: 425; Mature: 425

Protein sequence:

>425_residues
MKLRPISSLSLGLLIATSALLAGCNSDDNNTEVTPPASKPVPAQVGERPLFLVRQMQDSALKTRLEQCTTDNFYRSEFSI
GHRGAAMQFPEHTKESYQAAIDSGAGIVECDVTFTADKALVCRHSQCDLASTTNILAVPELANKCSSPFTPADAANGVSA
SATCCTSDITLAEFKTLKGKMEGSNPKATTAAEFINGTPSWRTDLYAGNGTLMTHAESIEMFKKAGVKMTPELKAASVSM
PFDGFTQQDYAQKMLDEYTAAGVDASQVFPQSFILDDIKYWVANAPEFAKQAVFLDDRYDYNSAFDPQNSATWSPSMADL
KTQGVEIIAPPLWVLVALDADKKIIPSEYAKAAKDAGLKIITWSLERSGLLKNGGGFYYQSITEAIDNEGDTFELLDVLA
KDVGVIGVFSDWPATVTYYANCMDL

Sequences:

>Translated_425_residues
MKLRPISSLSLGLLIATSALLAGCNSDDNNTEVTPPASKPVPAQVGERPLFLVRQMQDSALKTRLEQCTTDNFYRSEFSI
GHRGAAMQFPEHTKESYQAAIDSGAGIVECDVTFTADKALVCRHSQCDLASTTNILAVPELANKCSSPFTPADAANGVSA
SATCCTSDITLAEFKTLKGKMEGSNPKATTAAEFINGTPSWRTDLYAGNGTLMTHAESIEMFKKAGVKMTPELKAASVSM
PFDGFTQQDYAQKMLDEYTAAGVDASQVFPQSFILDDIKYWVANAPEFAKQAVFLDDRYDYNSAFDPQNSATWSPSMADL
KTQGVEIIAPPLWVLVALDADKKIIPSEYAKAAKDAGLKIITWSLERSGLLKNGGGFYYQSITEAIDNEGDTFELLDVLA
KDVGVIGVFSDWPATVTYYANCMDL
>Mature_425_residues
MKLRPISSLSLGLLIATSALLAGCNSDDNNTEVTPPASKPVPAQVGERPLFLVRQMQDSALKTRLEQCTTDNFYRSEFSI
GHRGAAMQFPEHTKESYQAAIDSGAGIVECDVTFTADKALVCRHSQCDLASTTNILAVPELANKCSSPFTPADAANGVSA
SATCCTSDITLAEFKTLKGKMEGSNPKATTAAEFINGTPSWRTDLYAGNGTLMTHAESIEMFKKAGVKMTPELKAASVSM
PFDGFTQQDYAQKMLDEYTAAGVDASQVFPQSFILDDIKYWVANAPEFAKQAVFLDDRYDYNSAFDPQNSATWSPSMADL
KTQGVEIIAPPLWVLVALDADKKIIPSEYAKAAKDAGLKIITWSLERSGLLKNGGGFYYQSITEAIDNEGDTFELLDVLA
KDVGVIGVFSDWPATVTYYANCMDL

Specific function: Unknown

COG id: COG0584

COG function: function code C; Glycerophosphoryl diester phosphodiesterase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45982; Mature: 45982

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLRPISSLSLGLLIATSALLAGCNSDDNNTEVTPPASKPVPAQVGERPLFLVRQMQDSA
CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCHHHCCCHHHHHHHHHHHH
LKTRLEQCTTDNFYRSEFSIGHRGAAMQFPEHTKESYQAAIDSGAGIVECDVTFTADKAL
HHHHHHHHCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEEECCCEE
VCRHSQCDLASTTNILAVPELANKCSSPFTPADAANGVSASATCCTSDITLAEFKTLKGK
EEECCCCCCCCCCCEEECCHHHHHCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHCC
MEGSNPKATTAAEFINGTPSWRTDLYAGNGTLMTHAESIEMFKKAGVKMTPELKAASVSM
CCCCCCCHHHHHHHHCCCCCCCCEEEECCCEEEECHHHHHHHHHCCCCCCCCCCEEEECC
PFDGFTQQDYAQKMLDEYTAAGVDASQVFPQSFILDDIKYWVANAPEFAKQAVFLDDRYD
CCCCCCHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHCCCHHHHHHEEEECCCCC
YNSAFDPQNSATWSPSMADLKTQGVEIIAPPLWVLVALDADKKIIPSEYAKAAKDAGLKI
CCCCCCCCCCCCCCCCHHHHHHCCEEEEECCEEEEEEECCCCCCCCHHHHHHHHHCCEEE
ITWSLERSGLLKNGGGFYYQSITEAIDNEGDTFELLDVLAKDVGVIGVFSDWPATVTYYA
EEEECCCCCCEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCEEEEECCCCCEEEEEE
NCMDL
EECCC
>Mature Secondary Structure
MKLRPISSLSLGLLIATSALLAGCNSDDNNTEVTPPASKPVPAQVGERPLFLVRQMQDSA
CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCHHHCCCHHHHHHHHHHHH
LKTRLEQCTTDNFYRSEFSIGHRGAAMQFPEHTKESYQAAIDSGAGIVECDVTFTADKAL
HHHHHHHHCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEEECCCEE
VCRHSQCDLASTTNILAVPELANKCSSPFTPADAANGVSASATCCTSDITLAEFKTLKGK
EEECCCCCCCCCCCEEECCHHHHHCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHCC
MEGSNPKATTAAEFINGTPSWRTDLYAGNGTLMTHAESIEMFKKAGVKMTPELKAASVSM
CCCCCCCHHHHHHHHCCCCCCCCEEEECCCEEEECHHHHHHHHHCCCCCCCCCCEEEECC
PFDGFTQQDYAQKMLDEYTAAGVDASQVFPQSFILDDIKYWVANAPEFAKQAVFLDDRYD
CCCCCCHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHCCCHHHHHHEEEECCCCC
YNSAFDPQNSATWSPSMADLKTQGVEIIAPPLWVLVALDADKKIIPSEYAKAAKDAGLKI
CCCCCCCCCCCCCCCCHHHHHHCCEEEEECCEEEEEEECCCCCCCCHHHHHHHHHCCEEE
ITWSLERSGLLKNGGGFYYQSITEAIDNEGDTFELLDVLAKDVGVIGVFSDWPATVTYYA
EEEECCCCCCEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCEEEEECCCCCEEEEEE
NCMDL
EECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA