| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160876879
Identifier: 160876879
GI number: 160876879
Start: 4449121
End: 4450398
Strand: Direct
Name: 160876879
Synonym: Sbal195_3775
Alternate gene names: NA
Gene position: 4449121-4450398 (Clockwise)
Preceding gene: 160876876
Following gene: 160876882
Centisome position: 83.2
GC content: 48.04
Gene sequence:
>1278_bases ATGAAACTACGCCCTATTTCGTCGCTCTCACTCGGCCTGTTAATTGCCACCAGCGCTTTATTAGCTGGTTGCAATAGTGA CGATAACAACACAGAAGTCACGCCACCCGCTAGCAAACCTGTTCCAGCTCAAGTGGGAGAAAGACCTTTATTTCTCGTGC GTCAAATGCAAGACAGCGCACTTAAAACCCGCTTAGAGCAATGCACCACTGACAATTTTTATCGCAGCGAGTTTTCCATC GGTCACCGTGGCGCTGCGATGCAATTTCCTGAGCATACAAAGGAATCCTACCAAGCTGCTATCGATTCTGGCGCTGGCAT AGTTGAATGTGATGTCACCTTCACCGCTGATAAAGCCTTAGTTTGCCGCCACTCACAGTGCGATCTTGCCAGCACGACCA ACATTTTAGCCGTGCCTGAACTGGCTAATAAATGTTCGAGCCCATTCACTCCTGCTGATGCCGCCAATGGCGTCAGCGCA TCGGCGACCTGTTGCACCAGCGATATCACCCTCGCCGAATTTAAAACCCTCAAGGGTAAAATGGAAGGCAGCAATCCTAA AGCGACCACTGCGGCCGAATTCATCAATGGCACTCCAAGCTGGCGCACCGATCTCTACGCTGGCAATGGCACCTTGATGA CCCATGCCGAAAGTATTGAAATGTTTAAAAAAGCTGGCGTGAAGATGACGCCAGAGCTCAAAGCCGCCAGCGTATCTATG CCATTCGATGGTTTTACTCAGCAGGATTACGCGCAAAAAATGTTAGATGAATACACGGCGGCTGGCGTCGATGCTTCGCA AGTATTCCCTCAATCATTTATCTTAGATGACATCAAATATTGGGTCGCCAACGCACCCGAGTTTGCGAAACAAGCCGTAT TTCTCGATGACAGATACGATTATAACAGCGCTTTCGATCCACAAAATTCAGCCACTTGGTCACCATCAATGGCGGATTTG AAGACCCAAGGTGTCGAAATTATTGCGCCACCACTCTGGGTTTTAGTCGCCTTAGATGCGGATAAGAAAATCATTCCTTC GGAATACGCTAAGGCCGCCAAAGACGCGGGGCTTAAGATCATCACTTGGTCGCTGGAACGTTCTGGTTTATTAAAAAATG GCGGCGGCTTTTATTATCAAAGCATTACCGAAGCCATAGATAATGAAGGCGATACCTTTGAATTACTCGATGTGTTAGCT AAAGATGTCGGTGTGATTGGGGTATTCTCCGACTGGCCCGCCACTGTGACTTACTATGCTAACTGTATGGATTTATAA
Upstream 100 bases:
>100_bases TCTTGTTTATGTCATAAAAATAGGCTTTTTCAGTCACATTAACACTTTAGAGTTTCTGATTAATATTAATAATTTACATC ATTACTCATAGGTAAATCTG
Downstream 100 bases:
>100_bases GTCGTCGATATAGAAAACAAAAAATGCGTTAACGATTGCTCGTTAACGCATTTTTTTATTGCGAAAATAGTCTATATCTC GCCGCGAGCAAGCTATTTAA
Product: glycerophosphoryl diester phosphodiesterase
Products: NA
Alternate protein names: Glycerophosphoryl Diester Phosphodiesterase Family Protein; Glycerophosphoryl Diester Phosphodiesterase Family; Glycerophosphodiesterase; Glycerophosphoryl Diester Phosphodiesterase Periplasmic
Number of amino acids: Translated: 425; Mature: 425
Protein sequence:
>425_residues MKLRPISSLSLGLLIATSALLAGCNSDDNNTEVTPPASKPVPAQVGERPLFLVRQMQDSALKTRLEQCTTDNFYRSEFSI GHRGAAMQFPEHTKESYQAAIDSGAGIVECDVTFTADKALVCRHSQCDLASTTNILAVPELANKCSSPFTPADAANGVSA SATCCTSDITLAEFKTLKGKMEGSNPKATTAAEFINGTPSWRTDLYAGNGTLMTHAESIEMFKKAGVKMTPELKAASVSM PFDGFTQQDYAQKMLDEYTAAGVDASQVFPQSFILDDIKYWVANAPEFAKQAVFLDDRYDYNSAFDPQNSATWSPSMADL KTQGVEIIAPPLWVLVALDADKKIIPSEYAKAAKDAGLKIITWSLERSGLLKNGGGFYYQSITEAIDNEGDTFELLDVLA KDVGVIGVFSDWPATVTYYANCMDL
Sequences:
>Translated_425_residues MKLRPISSLSLGLLIATSALLAGCNSDDNNTEVTPPASKPVPAQVGERPLFLVRQMQDSALKTRLEQCTTDNFYRSEFSI GHRGAAMQFPEHTKESYQAAIDSGAGIVECDVTFTADKALVCRHSQCDLASTTNILAVPELANKCSSPFTPADAANGVSA SATCCTSDITLAEFKTLKGKMEGSNPKATTAAEFINGTPSWRTDLYAGNGTLMTHAESIEMFKKAGVKMTPELKAASVSM PFDGFTQQDYAQKMLDEYTAAGVDASQVFPQSFILDDIKYWVANAPEFAKQAVFLDDRYDYNSAFDPQNSATWSPSMADL KTQGVEIIAPPLWVLVALDADKKIIPSEYAKAAKDAGLKIITWSLERSGLLKNGGGFYYQSITEAIDNEGDTFELLDVLA KDVGVIGVFSDWPATVTYYANCMDL >Mature_425_residues MKLRPISSLSLGLLIATSALLAGCNSDDNNTEVTPPASKPVPAQVGERPLFLVRQMQDSALKTRLEQCTTDNFYRSEFSI GHRGAAMQFPEHTKESYQAAIDSGAGIVECDVTFTADKALVCRHSQCDLASTTNILAVPELANKCSSPFTPADAANGVSA SATCCTSDITLAEFKTLKGKMEGSNPKATTAAEFINGTPSWRTDLYAGNGTLMTHAESIEMFKKAGVKMTPELKAASVSM PFDGFTQQDYAQKMLDEYTAAGVDASQVFPQSFILDDIKYWVANAPEFAKQAVFLDDRYDYNSAFDPQNSATWSPSMADL KTQGVEIIAPPLWVLVALDADKKIIPSEYAKAAKDAGLKIITWSLERSGLLKNGGGFYYQSITEAIDNEGDTFELLDVLA KDVGVIGVFSDWPATVTYYANCMDL
Specific function: Unknown
COG id: COG0584
COG function: function code C; Glycerophosphoryl diester phosphodiesterase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45982; Mature: 45982
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLRPISSLSLGLLIATSALLAGCNSDDNNTEVTPPASKPVPAQVGERPLFLVRQMQDSA CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCHHHCCCHHHHHHHHHHHH LKTRLEQCTTDNFYRSEFSIGHRGAAMQFPEHTKESYQAAIDSGAGIVECDVTFTADKAL HHHHHHHHCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEEECCCEE VCRHSQCDLASTTNILAVPELANKCSSPFTPADAANGVSASATCCTSDITLAEFKTLKGK EEECCCCCCCCCCCEEECCHHHHHCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHCC MEGSNPKATTAAEFINGTPSWRTDLYAGNGTLMTHAESIEMFKKAGVKMTPELKAASVSM CCCCCCCHHHHHHHHCCCCCCCCEEEECCCEEEECHHHHHHHHHCCCCCCCCCCEEEECC PFDGFTQQDYAQKMLDEYTAAGVDASQVFPQSFILDDIKYWVANAPEFAKQAVFLDDRYD CCCCCCHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHCCCHHHHHHEEEECCCCC YNSAFDPQNSATWSPSMADLKTQGVEIIAPPLWVLVALDADKKIIPSEYAKAAKDAGLKI CCCCCCCCCCCCCCCCHHHHHHCCEEEEECCEEEEEEECCCCCCCCHHHHHHHHHCCEEE ITWSLERSGLLKNGGGFYYQSITEAIDNEGDTFELLDVLAKDVGVIGVFSDWPATVTYYA EEEECCCCCCEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCEEEEECCCCCEEEEEE NCMDL EECCC >Mature Secondary Structure MKLRPISSLSLGLLIATSALLAGCNSDDNNTEVTPPASKPVPAQVGERPLFLVRQMQDSA CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCHHHCCCHHHHHHHHHHHH LKTRLEQCTTDNFYRSEFSIGHRGAAMQFPEHTKESYQAAIDSGAGIVECDVTFTADKAL HHHHHHHHCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEEECCCEE VCRHSQCDLASTTNILAVPELANKCSSPFTPADAANGVSASATCCTSDITLAEFKTLKGK EEECCCCCCCCCCCEEECCHHHHHCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHCC MEGSNPKATTAAEFINGTPSWRTDLYAGNGTLMTHAESIEMFKKAGVKMTPELKAASVSM CCCCCCCHHHHHHHHCCCCCCCCEEEECCCEEEECHHHHHHHHHCCCCCCCCCCEEEECC PFDGFTQQDYAQKMLDEYTAAGVDASQVFPQSFILDDIKYWVANAPEFAKQAVFLDDRYD CCCCCCHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHCCCHHHHHHEEEECCCCC YNSAFDPQNSATWSPSMADLKTQGVEIIAPPLWVLVALDADKKIIPSEYAKAAKDAGLKI CCCCCCCCCCCCCCCCHHHHHHCCEEEEECCEEEEEEECCCCCCCCHHHHHHHHHCCEEE ITWSLERSGLLKNGGGFYYQSITEAIDNEGDTFELLDVLAKDVGVIGVFSDWPATVTYYA EEEECCCCCCEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCEEEEECCCCCEEEEEE NCMDL EECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA