| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160876882
Identifier: 160876882
GI number: 160876882
Start: 4453371
End: 4453796
Strand: Direct
Name: 160876882
Synonym: Sbal195_3778
Alternate gene names: NA
Gene position: 4453371-4453796 (Clockwise)
Preceding gene: 160876879
Following gene: 160876884
Centisome position: 83.28
GC content: 49.06
Gene sequence:
>426_bases ATGAAAGTCAGCGATATTATGAGTGATCAAGTCATCTGCATCAGCGATGGCGCCAGCTTGAAAGATGCCCACCATCTGAT GCAAACCCGTGGCGTACGCCACTTACCTGTGATTTCTGAAATTGATGGCACCCTCGTTGGCGTACTCACCCATAAAAAGA TGATCGCCAGCGTGATGACTATGTTGAACAAGTACGGCCAAGGCGCGCTCGAGCGCAAAGAACGATACACGCCGATCACA ACTGTGATGGACCAAGACTATCAGCATCTTACCGCCGACGAGCCCTTAACTGTGGTGGTGGAATATTTTATCGAAAACAA ACTCGGCTGCTTGCCCGTCGTCGATGCCGATAAAAAGGTGCTCGGTATCGTCACGTCATCGGACTTTATCAAGCTATGTC GTACCTTGTTGAAGCAGCAAAGTTAA
Upstream 100 bases:
>100_bases GCAGGGCTGGCGCAGCGAACAAGTAAGCTGCTAACATCGGTGCAGGCTAACGCAGCGTGTTAAATGCACGCCTAAGAATG GCAAGAAAAGGAATTTAACA
Downstream 100 bases:
>100_bases GCTTATCAAACAAAAAGCGCAGCCTATGTTTGCTGCGCTTCCAATTCACCTCACCAAAATTACACTGCAGTCACAGCGGG TATTCGAGTAAAACGCTGCC
Product: CBS domain-containing protein
Products: NA
Alternate protein names: Signal Transduction Protein With CBS Domains; CBS Domain Protein; CBS Domain Containing Membrane Protein; CBS Domains Protein; Signal Transduction Protein; CBS Domain Containing Protein
Number of amino acids: Translated: 141; Mature: 141
Protein sequence:
>141_residues MKVSDIMSDQVICISDGASLKDAHHLMQTRGVRHLPVISEIDGTLVGVLTHKKMIASVMTMLNKYGQGALERKERYTPIT TVMDQDYQHLTADEPLTVVVEYFIENKLGCLPVVDADKKVLGIVTSSDFIKLCRTLLKQQS
Sequences:
>Translated_141_residues MKVSDIMSDQVICISDGASLKDAHHLMQTRGVRHLPVISEIDGTLVGVLTHKKMIASVMTMLNKYGQGALERKERYTPIT TVMDQDYQHLTADEPLTVVVEYFIENKLGCLPVVDADKKVLGIVTSSDFIKLCRTLLKQQS >Mature_141_residues MKVSDIMSDQVICISDGASLKDAHHLMQTRGVRHLPVISEIDGTLVGVLTHKKMIASVMTMLNKYGQGALERKERYTPIT TVMDQDYQHLTADEPLTVVVEYFIENKLGCLPVVDADKKVLGIVTSSDFIKLCRTLLKQQS
Specific function: Unknown
COG id: COG0517
COG function: function code R; FOG: CBS domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15719; Mature: 15719
Theoretical pI: Translated: 7.04; Mature: 7.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVSDIMSDQVICISDGASLKDAHHLMQTRGVRHLPVISEIDGTLVGVLTHKKMIASVMT CCCCHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHH MLNKYGQGALERKERYTPITTVMDQDYQHLTADEPLTVVVEYFIENKLGCLPVVDADKKV HHHHHCCCHHHHHHCCCCHHHHHCCCHHHCCCCCCHHHHHHHHHHCCCCCEEEECCCCEE LGIVTSSDFIKLCRTLLKQQS EEEECCHHHHHHHHHHHHCCC >Mature Secondary Structure MKVSDIMSDQVICISDGASLKDAHHLMQTRGVRHLPVISEIDGTLVGVLTHKKMIASVMT CCCCHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHH MLNKYGQGALERKERYTPITTVMDQDYQHLTADEPLTVVVEYFIENKLGCLPVVDADKKV HHHHHCCCHHHHHHCCCCHHHHHCCCHHHCCCCCCHHHHHHHHHHCCCCCEEEECCCCEE LGIVTSSDFIKLCRTLLKQQS EEEECCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA