| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is yjeS [H]
Identifier: 160876866
GI number: 160876866
Start: 4431506
End: 4432708
Strand: Direct
Name: yjeS [H]
Synonym: Sbal195_3762
Alternate gene names: 160876866
Gene position: 4431506-4432708 (Clockwise)
Preceding gene: 160876864
Following gene: 160876868
Centisome position: 82.87
GC content: 51.79
Gene sequence:
>1203_bases ATGTCGACTTTAGCCAATCCAATCCCTAATCAATCCTATGCCAGCACACTGTCGCGGCTCGCGCTGCAAATAAAAACCTG GGGAAAAGCACTCGGATTTGCGCAGGTTGGCATTTGCGATACAGATTTAACGGCCGAAGAAGCCAAACTCCAAGCATGGC TAGACAAAGGGTTTCATGGCGAAATGGCGTATATGGCCACCCATGGCATGATGCGCGCTCGCCCGCAAGAATTGCATCCG GGCACAGTGCGGGTAATATCCGTACGGATGGATTATTTACCACCCGAAGCTGGCTTTGCTACGAATCTCACCGATCCCAA CTTAGGTTATATTTCCCGTTATGCGGGAGGTCGCGACTACCACAAGTTGATCCGCGCTCGGCTTAAAAAACTGGGGGATC AAATCAGTGCAGAGCTCGTGTCTCTCGGTTTCGATGCCGCTGACTTTCGCCCCTTTGTTGACTCAGCCCCCGTACTCGAG CGCCCATTAGCCGAAAAAGCCGGTATCGGCTGGACAGGTAAACACTCACTCATACTCAACCATGAGGCGGGTAGTTGGTT CTTTTTAGGTGAGCTGCTGATCAATTTGCCTCTGCCTGTGGATATTCCCATTCAAGAAGGCTGCAAAACTTGTGTCGCCT GCATCACCTCCTGCCCAACAGGGGCAATCGTAGAACCCTATGTGGTTGATGGCAGACGCTGTATTTCCTATCTCACCATC GAGCTGCAAGGCGCTATTCCTGAAGAATTTAGGCCACTCATGGGAAATCGCATCTATGGCTGCGATGATTGTCAGCTCGT GTGCCCCATCAATCGCCAAGCGCCACTCACCGCCGAAACCGACTTCCACATTCGTCCCCAGTTAAAACAGCCCGACCTTC TCAGCCTTTTTGCTTGGAGCGAGGCCGAATTTCTAAAGCAAACCGAAGGCAGCGCCATTCGCAGAATTGGCCATAAACGC TGGCTACGTAATATCGCAGTCGCGCTGGGTAACGCCCCCGCCAGCCCAAGTATTATTGCCGCACTTAACGCCCGCAATAA CAGTGACGATATCGATGAGATAGTGAGTGAACATATCGAGTGGGCGCTCAATGCGCAGCAATCGCGCCTTGCCGATATCG CAGCAATTGAACAACAAAAAGCACGCCGCAAGACTGAACGCATGGTGCGTATTATCAAAAAAGGCTTACCACGAGATGCT TAA
Upstream 100 bases:
>100_bases AATCGCGCCTCATTCATGCTCACTGAGTAAACTCGTCCGCAACAAGTGAAAACTTGCTATCATATTGCCACCTAGCCAAG AGCCTCGCTGCAATGAATCC
Downstream 100 bases:
>100_bases CATCTAACAAGGTTATCAATAGCTTACTACTGATTAACTAGCCTAAACTAAGAATCGTCATTCGCTCAGTACATCTATTG AACCTTGATATTAAACATGG
Product: putative iron-sulfur cluster-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 400; Mature: 399
Protein sequence:
>400_residues MSTLANPIPNQSYASTLSRLALQIKTWGKALGFAQVGICDTDLTAEEAKLQAWLDKGFHGEMAYMATHGMMRARPQELHP GTVRVISVRMDYLPPEAGFATNLTDPNLGYISRYAGGRDYHKLIRARLKKLGDQISAELVSLGFDAADFRPFVDSAPVLE RPLAEKAGIGWTGKHSLILNHEAGSWFFLGELLINLPLPVDIPIQEGCKTCVACITSCPTGAIVEPYVVDGRRCISYLTI ELQGAIPEEFRPLMGNRIYGCDDCQLVCPINRQAPLTAETDFHIRPQLKQPDLLSLFAWSEAEFLKQTEGSAIRRIGHKR WLRNIAVALGNAPASPSIIAALNARNNSDDIDEIVSEHIEWALNAQQSRLADIAAIEQQKARRKTERMVRIIKKGLPRDA
Sequences:
>Translated_400_residues MSTLANPIPNQSYASTLSRLALQIKTWGKALGFAQVGICDTDLTAEEAKLQAWLDKGFHGEMAYMATHGMMRARPQELHP GTVRVISVRMDYLPPEAGFATNLTDPNLGYISRYAGGRDYHKLIRARLKKLGDQISAELVSLGFDAADFRPFVDSAPVLE RPLAEKAGIGWTGKHSLILNHEAGSWFFLGELLINLPLPVDIPIQEGCKTCVACITSCPTGAIVEPYVVDGRRCISYLTI ELQGAIPEEFRPLMGNRIYGCDDCQLVCPINRQAPLTAETDFHIRPQLKQPDLLSLFAWSEAEFLKQTEGSAIRRIGHKR WLRNIAVALGNAPASPSIIAALNARNNSDDIDEIVSEHIEWALNAQQSRLADIAAIEQQKARRKTERMVRIIKKGLPRDA >Mature_399_residues STLANPIPNQSYASTLSRLALQIKTWGKALGFAQVGICDTDLTAEEAKLQAWLDKGFHGEMAYMATHGMMRARPQELHPG TVRVISVRMDYLPPEAGFATNLTDPNLGYISRYAGGRDYHKLIRARLKKLGDQISAELVSLGFDAADFRPFVDSAPVLER PLAEKAGIGWTGKHSLILNHEAGSWFFLGELLINLPLPVDIPIQEGCKTCVACITSCPTGAIVEPYVVDGRRCISYLTIE LQGAIPEEFRPLMGNRIYGCDDCQLVCPINRQAPLTAETDFHIRPQLKQPDLLSLFAWSEAEFLKQTEGSAIRRIGHKRW LRNIAVALGNAPASPSIIAALNARNNSDDIDEIVSEHIEWALNAQQSRLADIAAIEQQKARRKTERMVRIIKKGLPRDA
Specific function: Unknown
COG id: COG1600
COG function: function code C; Uncharacterized Fe-S protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]
Homologues:
Organism=Escherichia coli, GI1790608, Length=384, Percent_Identity=67.1875, Blast_Score=524, Evalue=1e-150,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004453 - InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR013542 - InterPro: IPR009051 [H]
Pfam domain/function: PF08331 DUF1730 [H]
EC number: NA
Molecular weight: Translated: 44276; Mature: 44145
Theoretical pI: Translated: 7.48; Mature: 7.48
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTLANPIPNQSYASTLSRLALQIKTWGKALGFAQVGICDTDLTAEEAKLQAWLDKGFHG CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCHHHHHHHHHHHCCCCC EMAYMATHGMMRARPQELHPGTVRVISVRMDYLPPEAGFATNLTDPNLGYISRYAGGRDY CHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHCCCHHH HKLIRARLKKLGDQISAELVSLGFDAADFRPFVDSAPVLERPLAEKAGIGWTGKHSLILN HHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCHHHCCHHHHCCCCCCCCCEEEEE HEAGSWFFLGELLINLPLPVDIPIQEGCKTCVACITSCPTGAIVEPYVVDGRRCISYLTI ECCCCEEEHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEECCHHHEEEEEEE ELQGAIPEEFRPLMGNRIYGCDDCQLVCPINRQAPLTAETDFHIRPQLKQPDLLSLFAWS EEECCCCHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCEECCCCCCCCHHHHHCCC EAEFLKQTEGSAIRRIGHKRWLRNIAVALGNAPASPSIIAALNARNNSDDIDEIVSEHIE HHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHH WALNAQQSRLADIAAIEQQKARRKTERMVRIIKKGLPRDA HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure STLANPIPNQSYASTLSRLALQIKTWGKALGFAQVGICDTDLTAEEAKLQAWLDKGFHG CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCHHHHHHHHHHHCCCCC EMAYMATHGMMRARPQELHPGTVRVISVRMDYLPPEAGFATNLTDPNLGYISRYAGGRDY CHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHCCCHHH HKLIRARLKKLGDQISAELVSLGFDAADFRPFVDSAPVLERPLAEKAGIGWTGKHSLILN HHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCHHHCCHHHHCCCCCCCCCEEEEE HEAGSWFFLGELLINLPLPVDIPIQEGCKTCVACITSCPTGAIVEPYVVDGRRCISYLTI ECCCCEEEHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEECCHHHEEEEEEE ELQGAIPEEFRPLMGNRIYGCDDCQLVCPINRQAPLTAETDFHIRPQLKQPDLLSLFAWS EEECCCCHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCEECCCCCCCCHHHHHCCC EAEFLKQTEGSAIRRIGHKRWLRNIAVALGNAPASPSIIAALNARNNSDDIDEIVSEHIE HHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHH WALNAQQSRLADIAAIEQQKARRKTERMVRIIKKGLPRDA HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Fe [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503 [H]