| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is maeA [H]
Identifier: 160876861
GI number: 160876861
Start: 4425645
End: 4427333
Strand: Direct
Name: maeA [H]
Synonym: Sbal195_3757
Alternate gene names: 160876861
Gene position: 4425645-4427333 (Clockwise)
Preceding gene: 160876860
Following gene: 160876864
Centisome position: 82.76
GC content: 47.78
Gene sequence:
>1689_bases ATGGACGATAATAAACGCCCCCTCTATCTTCCGTTTGCAGGACCTGCCATTCTTGAAGCCCCACTGATTAACAAGGGCAG TGCATTTTCTGAAGAAGAGCGTATTTTCTTTAACCTCGAAGGCTTAGTTCCCTATGCCATTGAAACGATTGAGGAGCAGG CTTCCCGCGCCTACGATCAATTTAGAAGTTTCAACAACGACTTAGACAAGCATATTTACCTACGTAATATCCAAGACACT AACGAGACCTTATTTTATCGTTTAGTGCAAAATAACATCAGCGAGATGATGCCCATCATCTATACGCCGACGGTAGGTTT GGCTTGTGAACGTTTCTCAAAAAACTATCGCCGCAACCGTGGTTTATTTATCTCCTATCCGAACAAAGATAGGATCGATG ACATTCTCAATAACTCGACTCGCCAAAAAGTCAAAATCATCGTTGTTACCGACGGTGAACGTATTTTAGGCCTTGGCGAT CAAGGTATTGGCGGCATGGGGATCCCTATCGGTAAGTTATCACTCTACACTAGCTGTGGTGGCATCAGTCCGGCTTATAC TCTGCCTATCACTTTAGACGTAGGCACAGATAATCCGCAGTTGTTAGAAGATCCTATGTATATGGGCTGGCGCCATCCGC GCATCGGTGGCGAAGAGTACGCCGAGTTTATAGAAGCCTTTATGCAAGCTGTACATGTGCGTTGGCCAGACACTTTGATC CAATTCGAAGACTTTGCCCAAAAGAATGCCATGCCGATCTTAGAGCGTTATAAAGATCGCTATTGCTGCTTTAACGATGA TATTCAAGGTACCGCAGCCGTTGCCGTCGGTTCATTGCTGGCCGCTTGTAAAGCTGCAGGTACTGAATTAAATCAACAAC GTATTGCCTTCCTTGGTGCGGGTAGCGCGGGTTGCGGTATCGCCGAAGCTATCGTGGCGCAAATGGTGTCCGAAGGGATC AGCGACGAGCAAGCTCGTACGCAAGTATGTATGGTTGACCGTTGGGGCTTATTGCTAGACAACATGCCTAACCTGTTGCC ATTCCAGCAAAAATTGGCGCAGAAATGCACCAATATCCAAAACTGGAGTAATTTCAGCGACAATATTTCGTTATTGGATG TAGTTAACAACGCTAAGCCAACCGTGCTGATTGGCGTGTCCGGTGTACCGGGTCTGTTCACCGAAGAAATTATTCGCGCT ATGCACAGCCATTGTGCCCGCCCGATTATTTTCCCACTGTCGAACCCAACCAGCCGTGTTGAAGCGACGCCAAAGGACAT TTTGCATTGGACCTCAGGTCAAGCACTCGTCGCCACGGGTAGTCCGTTCGAGCCCGTTGTGGTCGATGGTGAAACCTATG AGATTGCCCAGTGTAACAACAGCTTTATCTTCCCAGGTATTGGCTTAGGCGTTTTAGCCTCTGGTGCCCGCCACGTTTCC GATGCCATGTTAATGGCATCAAGCCGCGCACTTGCAGAATGCTCGCCACTGGCAATCGACGGTAGCGGCCCATTATTACC TAAACTGGAAGATATCCACGCGGTCAGTAAACACATCGCTTTCGCCGTAGGTAAAGTCGCAGTTGAACAAGGTTTAACGC TGCCAATGAGCGATGAAATCTTACAACAATCAATTGAAGGCAATTTCTGGAGTCCAGAATATCGCCGCTACAAACGCACT TCGTTCTAA
Upstream 100 bases:
>100_bases AATACCTCGTTCCACGGACAACAAAGATCACATTTCATGATAACCTTACGTGACTTACAGCACGTATTGACCACTTAAAC AATAACTCAAAAGGTTACCC
Downstream 100 bases:
>100_bases GCATAACGTTGCCGCGACTTAAGTCGTGGCAACGCAGCTTTAGCTAAGGGTTTGTGCCAGCAAAAAGCCCGTCACTGCAA AGTGACGGGCTTTTTAATTT
Product: malate dehydrogenase
Products: NA
Alternate protein names: NAD-ME [H]
Number of amino acids: Translated: 562; Mature: 562
Protein sequence:
>562_residues MDDNKRPLYLPFAGPAILEAPLINKGSAFSEEERIFFNLEGLVPYAIETIEEQASRAYDQFRSFNNDLDKHIYLRNIQDT NETLFYRLVQNNISEMMPIIYTPTVGLACERFSKNYRRNRGLFISYPNKDRIDDILNNSTRQKVKIIVVTDGERILGLGD QGIGGMGIPIGKLSLYTSCGGISPAYTLPITLDVGTDNPQLLEDPMYMGWRHPRIGGEEYAEFIEAFMQAVHVRWPDTLI QFEDFAQKNAMPILERYKDRYCCFNDDIQGTAAVAVGSLLAACKAAGTELNQQRIAFLGAGSAGCGIAEAIVAQMVSEGI SDEQARTQVCMVDRWGLLLDNMPNLLPFQQKLAQKCTNIQNWSNFSDNISLLDVVNNAKPTVLIGVSGVPGLFTEEIIRA MHSHCARPIIFPLSNPTSRVEATPKDILHWTSGQALVATGSPFEPVVVDGETYEIAQCNNSFIFPGIGLGVLASGARHVS DAMLMASSRALAECSPLAIDGSGPLLPKLEDIHAVSKHIAFAVGKVAVEQGLTLPMSDEILQQSIEGNFWSPEYRRYKRT SF
Sequences:
>Translated_562_residues MDDNKRPLYLPFAGPAILEAPLINKGSAFSEEERIFFNLEGLVPYAIETIEEQASRAYDQFRSFNNDLDKHIYLRNIQDT NETLFYRLVQNNISEMMPIIYTPTVGLACERFSKNYRRNRGLFISYPNKDRIDDILNNSTRQKVKIIVVTDGERILGLGD QGIGGMGIPIGKLSLYTSCGGISPAYTLPITLDVGTDNPQLLEDPMYMGWRHPRIGGEEYAEFIEAFMQAVHVRWPDTLI QFEDFAQKNAMPILERYKDRYCCFNDDIQGTAAVAVGSLLAACKAAGTELNQQRIAFLGAGSAGCGIAEAIVAQMVSEGI SDEQARTQVCMVDRWGLLLDNMPNLLPFQQKLAQKCTNIQNWSNFSDNISLLDVVNNAKPTVLIGVSGVPGLFTEEIIRA MHSHCARPIIFPLSNPTSRVEATPKDILHWTSGQALVATGSPFEPVVVDGETYEIAQCNNSFIFPGIGLGVLASGARHVS DAMLMASSRALAECSPLAIDGSGPLLPKLEDIHAVSKHIAFAVGKVAVEQGLTLPMSDEILQQSIEGNFWSPEYRRYKRT SF >Mature_562_residues MDDNKRPLYLPFAGPAILEAPLINKGSAFSEEERIFFNLEGLVPYAIETIEEQASRAYDQFRSFNNDLDKHIYLRNIQDT NETLFYRLVQNNISEMMPIIYTPTVGLACERFSKNYRRNRGLFISYPNKDRIDDILNNSTRQKVKIIVVTDGERILGLGD QGIGGMGIPIGKLSLYTSCGGISPAYTLPITLDVGTDNPQLLEDPMYMGWRHPRIGGEEYAEFIEAFMQAVHVRWPDTLI QFEDFAQKNAMPILERYKDRYCCFNDDIQGTAAVAVGSLLAACKAAGTELNQQRIAFLGAGSAGCGIAEAIVAQMVSEGI SDEQARTQVCMVDRWGLLLDNMPNLLPFQQKLAQKCTNIQNWSNFSDNISLLDVVNNAKPTVLIGVSGVPGLFTEEIIRA MHSHCARPIIFPLSNPTSRVEATPKDILHWTSGQALVATGSPFEPVVVDGETYEIAQCNNSFIFPGIGLGVLASGARHVS DAMLMASSRALAECSPLAIDGSGPLLPKLEDIHAVSKHIAFAVGKVAVEQGLTLPMSDEILQQSIEGNFWSPEYRRYKRT SF
Specific function: Unknown
COG id: COG0281
COG function: function code C; Malic enzyme
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the malic enzymes family [H]
Homologues:
Organism=Homo sapiens, GI4505143, Length=519, Percent_Identity=43.5452793834297, Blast_Score=439, Evalue=1e-123, Organism=Homo sapiens, GI62420882, Length=563, Percent_Identity=41.2078152753108, Blast_Score=436, Evalue=1e-122, Organism=Homo sapiens, GI62420880, Length=563, Percent_Identity=41.2078152753108, Blast_Score=436, Evalue=1e-122, Organism=Homo sapiens, GI239049447, Length=563, Percent_Identity=41.2078152753108, Blast_Score=436, Evalue=1e-122, Organism=Homo sapiens, GI4505145, Length=553, Percent_Identity=42.1338155515371, Blast_Score=423, Evalue=1e-118, Organism=Homo sapiens, GI270265879, Length=468, Percent_Identity=45.0854700854701, Blast_Score=393, Evalue=1e-109, Organism=Escherichia coli, GI87081919, Length=558, Percent_Identity=67.5627240143369, Blast_Score=781, Evalue=0.0, Organism=Caenorhabditis elegans, GI17537199, Length=546, Percent_Identity=43.956043956044, Blast_Score=431, Evalue=1e-121, Organism=Saccharomyces cerevisiae, GI6322823, Length=566, Percent_Identity=43.4628975265018, Blast_Score=436, Evalue=1e-123, Organism=Drosophila melanogaster, GI281362672, Length=521, Percent_Identity=43.9539347408829, Blast_Score=434, Evalue=1e-122, Organism=Drosophila melanogaster, GI21356279, Length=521, Percent_Identity=43.9539347408829, Blast_Score=434, Evalue=1e-122, Organism=Drosophila melanogaster, GI281362674, Length=521, Percent_Identity=43.9539347408829, Blast_Score=434, Evalue=1e-122, Organism=Drosophila melanogaster, GI24646388, Length=511, Percent_Identity=42.6614481409002, Blast_Score=415, Evalue=1e-116, Organism=Drosophila melanogaster, GI24646386, Length=511, Percent_Identity=42.6614481409002, Blast_Score=415, Evalue=1e-116, Organism=Drosophila melanogaster, GI281363505, Length=535, Percent_Identity=37.3831775700935, Blast_Score=382, Evalue=1e-106, Organism=Drosophila melanogaster, GI78707236, Length=535, Percent_Identity=37.3831775700935, Blast_Score=382, Evalue=1e-106, Organism=Drosophila melanogaster, GI78707232, Length=509, Percent_Identity=38.3104125736739, Blast_Score=380, Evalue=1e-106, Organism=Drosophila melanogaster, GI281363503, Length=543, Percent_Identity=36.8324125230203, Blast_Score=378, Evalue=1e-105, Organism=Drosophila melanogaster, GI78707242, Length=537, Percent_Identity=38.7337057728119, Blast_Score=369, Evalue=1e-102, Organism=Drosophila melanogaster, GI78707238, Length=537, Percent_Identity=38.7337057728119, Blast_Score=369, Evalue=1e-102, Organism=Drosophila melanogaster, GI78707240, Length=518, Percent_Identity=39.3822393822394, Blast_Score=368, Evalue=1e-102, Organism=Drosophila melanogaster, GI19922384, Length=543, Percent_Identity=30.0184162062615, Blast_Score=251, Evalue=9e-67,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015884 - InterPro: IPR012301 - InterPro: IPR012302 - InterPro: IPR001891 - InterPro: IPR016040 [H]
Pfam domain/function: PF00390 malic; PF03949 Malic_M [H]
EC number: =1.1.1.38 [H]
Molecular weight: Translated: 62103; Mature: 62103
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: PS00331 MALIC_ENZYMES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDDNKRPLYLPFAGPAILEAPLINKGSAFSEEERIFFNLEGLVPYAIETIEEQASRAYDQ CCCCCCEEEEECCCCHHHCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHH FRSFNNDLDKHIYLRNIQDTNETLFYRLVQNNISEMMPIIYTPTVGLACERFSKNYRRNR HHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCEEECCCHHHHHHHHHHHHHHCC GLFISYPNKDRIDDILNNSTRQKVKIIVVTDGERILGLGDQGIGGMGIPIGKLSLYTSCG CEEEECCCCHHHHHHHCCCCCCEEEEEEEECCCEEEECCCCCCCCCCCCCCCEEEEECCC GISPAYTLPITLDVGTDNPQLLEDPMYMGWRHPRIGGEEYAEFIEAFMQAVHVRWPDTLI CCCCCEEEEEEEEECCCCHHHHCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHH QFEDFAQKNAMPILERYKDRYCCFNDDIQGTAAVAVGSLLAACKAAGTELNQQRIAFLGA HHHHHHHCCCCHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEC GSAGCGIAEAIVAQMVSEGISDEQARTQVCMVDRWGLLLDNMPNLLPFQQKLAQKCTNIQ CCCCCHHHHHHHHHHHHCCCCCHHHHHHEEEEHHHHHHHHCCCCCCHHHHHHHHHHCCCC NWSNFSDNISLLDVVNNAKPTVLIGVSGVPGLFTEEIIRAMHSHCARPIIFPLSNPTSRV CCCCCCCCCEEEEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHC EATPKDILHWTSGQALVATGSPFEPVVVDGETYEIAQCNNSFIFPGIGLGVLASGARHVS CCCHHHHHEECCCCEEEECCCCCCCEEECCCEEEEEECCCCEECCCCCHHHHHCCHHHHH DAMLMASSRALAECSPLAIDGSGPLLPKLEDIHAVSKHIAFAVGKVAVEQGLTLPMSDEI HHHHHHCCCHHHCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH LQQSIEGNFWSPEYRRYKRTSF HHHHHCCCCCCHHHHHHHCCCC >Mature Secondary Structure MDDNKRPLYLPFAGPAILEAPLINKGSAFSEEERIFFNLEGLVPYAIETIEEQASRAYDQ CCCCCCEEEEECCCCHHHCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHH FRSFNNDLDKHIYLRNIQDTNETLFYRLVQNNISEMMPIIYTPTVGLACERFSKNYRRNR HHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCEEECCCHHHHHHHHHHHHHHCC GLFISYPNKDRIDDILNNSTRQKVKIIVVTDGERILGLGDQGIGGMGIPIGKLSLYTSCG CEEEECCCCHHHHHHHCCCCCCEEEEEEEECCCEEEECCCCCCCCCCCCCCCEEEEECCC GISPAYTLPITLDVGTDNPQLLEDPMYMGWRHPRIGGEEYAEFIEAFMQAVHVRWPDTLI CCCCCEEEEEEEEECCCCHHHHCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHH QFEDFAQKNAMPILERYKDRYCCFNDDIQGTAAVAVGSLLAACKAAGTELNQQRIAFLGA HHHHHHHCCCCHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEC GSAGCGIAEAIVAQMVSEGISDEQARTQVCMVDRWGLLLDNMPNLLPFQQKLAQKCTNIQ CCCCCHHHHHHHHHHHHCCCCCHHHHHHEEEEHHHHHHHHCCCCCCHHHHHHHHHHCCCC NWSNFSDNISLLDVVNNAKPTVLIGVSGVPGLFTEEIIRAMHSHCARPIIFPLSNPTSRV CCCCCCCCCEEEEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHC EATPKDILHWTSGQALVATGSPFEPVVVDGETYEIAQCNNSFIFPGIGLGVLASGARHVS CCCHHHHHEECCCCEEEECCCCCCCEEECCCEEEEEECCCCEECCCCCHHHHHCCHHHHH DAMLMASSRALAECSPLAIDGSGPLLPKLEDIHAVSKHIAFAVGKVAVEQGLTLPMSDEI HHHHHHCCCHHHCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH LQQSIEGNFWSPEYRRYKRTSF HHHHHCCCCCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA