| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is metK [H]
Identifier: 160876766
GI number: 160876766
Start: 4319473
End: 4320624
Strand: Direct
Name: metK [H]
Synonym: Sbal195_3660
Alternate gene names: 160876766
Gene position: 4319473-4320624 (Clockwise)
Preceding gene: 160876756
Following gene: 160876769
Centisome position: 80.78
GC content: 48.52
Gene sequence:
>1152_bases ATGGCAAAGCACTTGTTTACTTCTGAGTCGGTCTCAGAAGGTCATCCCGATAAGATTGCAGATCAGATTTCTGATGCTGT GCTAGATGCAATTCTGGCTCAAGATCCAAAAGCACGCGTGGCGTGTGAAACTTATGTCAAAACTGGCATGGTATTAGTCG GTGGCGAAGTCACGACTTCTGCTTGGGTTGATATCGAAGAAATCACCCGTAAAACGGTGCGTGAAATTGGTTATACCCAC TCAGATATGGGTTTTGATGCAGACTCGTGTGCGGTATTAAACGCCATTGGTAAGCAATCACCTGATATCAATCAAGGTGT AGACCGTGCTGACCCTGCTGAGCAAGGTGCAGGCGACCAAGGGTTAATGTTTGGCTATGCCAACAACGAAACCGACGTCC TAATGCCAGCGCCTATCACTTATGCCCACGCATTAGTGAAGCGTCAGTCTGAAGTGCGTAAAAACGGCACCCTGCCTTGG TTACGCCCAGATGCGAAAAGCCAAGTCACGTTTGCCTATGATGATGGCAAAATTGTCGGTATCGATGCCGTCGTATTGTC GACTCAGCACAGAGATGACGTTTCACAAGCCGACTTAATTGAAGGCGTGATGGAAACCATCATCAAACCAGTATTACCGG CTCAATGGCTAAACAAAGACACTAAGTTCTTTATCAACCCAACTGGCCGTTTTGTTATCGGTGGTCCAGTAGGCGATTGC GGCTTAACCGGTCGTAAGATCATCGTTGACACCTACGGCGGCATGGCCCGTCATGGTGGTGGCGCATTCTCTGGTAAAGA TCCATCAAAAGTTGACCGTAGCGCGGCATACGCTGCCCGTTATGTGGCAAAAAACATAGTGGCAGCAGGTCTTGCTGATC GCTGTGAAATCCAAGTGTCTTACGCTATTGGTGTAGCAGAGCCTACTTCTATCAGCATCGAGACCTTCGGTACGGGTAAA GTGTCTGAAGATTTGCTGATCAAGTTAGTACGTCAACACTTCGAACTGCGTCCATACGGTTTAACGGCCATGCTAGATTT AGCACGTCCGATTTATCAAGCGACTGCCGCTTATGGTCACTTTGGTCGTAACGAATTCCCTTGGGAAGCAACGGACAAAG CTGAAGCACTGCGCGCTGACGCTGGTCTATAA
Upstream 100 bases:
>100_bases TTCTCACTGGGGGTGATCGGCAATCAGATTTAAACTAAAATAGCCGTCTAGATGTAGATGCTTCTACACGTTTGAATGCT AACGACGAGATTTTCCTACT
Downstream 100 bases:
>100_bases TCGGTTTCGATTAAAACCCGCTAAGATTGCAAAATATAAAAACCGCTATCCAGCGGTTTTTTTATGCCTGAAATTTGGGT TCCCCAAAGCAAGATAATTG
Product: S-adenosylmethionine synthetase
Products: NA
Alternate protein names: AdoMet synthase; MAT; Methionine adenosyltransferase [H]
Number of amino acids: Translated: 383; Mature: 382
Protein sequence:
>383_residues MAKHLFTSESVSEGHPDKIADQISDAVLDAILAQDPKARVACETYVKTGMVLVGGEVTTSAWVDIEEITRKTVREIGYTH SDMGFDADSCAVLNAIGKQSPDINQGVDRADPAEQGAGDQGLMFGYANNETDVLMPAPITYAHALVKRQSEVRKNGTLPW LRPDAKSQVTFAYDDGKIVGIDAVVLSTQHRDDVSQADLIEGVMETIIKPVLPAQWLNKDTKFFINPTGRFVIGGPVGDC GLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSISIETFGTGK VSEDLLIKLVRQHFELRPYGLTAMLDLARPIYQATAAYGHFGRNEFPWEATDKAEALRADAGL
Sequences:
>Translated_383_residues MAKHLFTSESVSEGHPDKIADQISDAVLDAILAQDPKARVACETYVKTGMVLVGGEVTTSAWVDIEEITRKTVREIGYTH SDMGFDADSCAVLNAIGKQSPDINQGVDRADPAEQGAGDQGLMFGYANNETDVLMPAPITYAHALVKRQSEVRKNGTLPW LRPDAKSQVTFAYDDGKIVGIDAVVLSTQHRDDVSQADLIEGVMETIIKPVLPAQWLNKDTKFFINPTGRFVIGGPVGDC GLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSISIETFGTGK VSEDLLIKLVRQHFELRPYGLTAMLDLARPIYQATAAYGHFGRNEFPWEATDKAEALRADAGL >Mature_382_residues AKHLFTSESVSEGHPDKIADQISDAVLDAILAQDPKARVACETYVKTGMVLVGGEVTTSAWVDIEEITRKTVREIGYTHS DMGFDADSCAVLNAIGKQSPDINQGVDRADPAEQGAGDQGLMFGYANNETDVLMPAPITYAHALVKRQSEVRKNGTLPWL RPDAKSQVTFAYDDGKIVGIDAVVLSTQHRDDVSQADLIEGVMETIIKPVLPAQWLNKDTKFFINPTGRFVIGGPVGDCG LTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSISIETFGTGKV SEDLLIKLVRQHFELRPYGLTAMLDLARPIYQATAAYGHFGRNEFPWEATDKAEALRADAGL
Specific function: Catalyzes the formation of S-adenosylmethionine from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the e
COG id: COG0192
COG function: function code H; S-adenosylmethionine synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AdoMet synthase family [H]
Homologues:
Organism=Homo sapiens, GI5174529, Length=375, Percent_Identity=58.1333333333333, Blast_Score=417, Evalue=1e-117, Organism=Homo sapiens, GI4557737, Length=375, Percent_Identity=58.1333333333333, Blast_Score=417, Evalue=1e-117, Organism=Escherichia coli, GI1789311, Length=383, Percent_Identity=86.1618798955614, Blast_Score=687, Evalue=0.0, Organism=Caenorhabditis elegans, GI25145633, Length=386, Percent_Identity=55.1813471502591, Blast_Score=407, Evalue=1e-114, Organism=Caenorhabditis elegans, GI17538498, Length=372, Percent_Identity=56.1827956989247, Blast_Score=405, Evalue=1e-113, Organism=Caenorhabditis elegans, GI17538494, Length=376, Percent_Identity=55.5851063829787, Blast_Score=404, Evalue=1e-113, Organism=Caenorhabditis elegans, GI17551082, Length=387, Percent_Identity=53.4883720930233, Blast_Score=399, Evalue=1e-111, Organism=Caenorhabditis elegans, GI32565905, Length=376, Percent_Identity=50.531914893617, Blast_Score=344, Evalue=4e-95, Organism=Caenorhabditis elegans, GI32565911, Length=325, Percent_Identity=52.3076923076923, Blast_Score=329, Evalue=2e-90, Organism=Caenorhabditis elegans, GI25145635, Length=339, Percent_Identity=51.3274336283186, Blast_Score=329, Evalue=2e-90, Organism=Caenorhabditis elegans, GI32565903, Length=298, Percent_Identity=52.6845637583893, Blast_Score=298, Evalue=4e-81, Organism=Caenorhabditis elegans, GI32565909, Length=87, Percent_Identity=60.9195402298851, Blast_Score=110, Evalue=8e-25, Organism=Caenorhabditis elegans, GI32565907, Length=46, Percent_Identity=76.0869565217391, Blast_Score=75, Evalue=8e-14, Organism=Saccharomyces cerevisiae, GI6320710, Length=376, Percent_Identity=56.9148936170213, Blast_Score=414, Evalue=1e-117, Organism=Saccharomyces cerevisiae, GI6323209, Length=370, Percent_Identity=57.027027027027, Blast_Score=407, Evalue=1e-114, Organism=Drosophila melanogaster, GI45552159, Length=380, Percent_Identity=53.9473684210526, Blast_Score=377, Evalue=1e-105, Organism=Drosophila melanogaster, GI24580529, Length=380, Percent_Identity=53.9473684210526, Blast_Score=377, Evalue=1e-105, Organism=Drosophila melanogaster, GI24580537, Length=380, Percent_Identity=53.9473684210526, Blast_Score=377, Evalue=1e-105, Organism=Drosophila melanogaster, GI24580533, Length=380, Percent_Identity=53.9473684210526, Blast_Score=377, Evalue=1e-105, Organism=Drosophila melanogaster, GI24580535, Length=380, Percent_Identity=53.9473684210526, Blast_Score=377, Evalue=1e-105, Organism=Drosophila melanogaster, GI24580531, Length=380, Percent_Identity=53.9473684210526, Blast_Score=377, Evalue=1e-105, Organism=Drosophila melanogaster, GI24580527, Length=379, Percent_Identity=53.0343007915567, Blast_Score=371, Evalue=1e-103, Organism=Drosophila melanogaster, GI24580525, Length=379, Percent_Identity=53.0343007915567, Blast_Score=371, Evalue=1e-103, Organism=Drosophila melanogaster, GI24580541, Length=378, Percent_Identity=50.7936507936508, Blast_Score=348, Evalue=3e-96, Organism=Drosophila melanogaster, GI24580539, Length=120, Percent_Identity=56.6666666666667, Blast_Score=131, Evalue=7e-31,
Paralogues:
None
Copy number: 7,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022631 - InterPro: IPR022630 - InterPro: IPR022629 - InterPro: IPR022628 - InterPro: IPR002133 - InterPro: IPR022636 [H]
Pfam domain/function: PF02773 S-AdoMet_synt_C; PF02772 S-AdoMet_synt_M; PF00438 S-AdoMet_synt_N [H]
EC number: =2.5.1.6 [H]
Molecular weight: Translated: 41264; Mature: 41133
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: PS00376 ADOMET_SYNTHETASE_1 ; PS00377 ADOMET_SYNTHETASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKHLFTSESVSEGHPDKIADQISDAVLDAILAQDPKARVACETYVKTGMVLVGGEVTTS CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCEEEECCCCCCH AWVDIEEITRKTVREIGYTHSDMGFDADSCAVLNAIGKQSPDINQGVDRADPAEQGAGDQ HCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCHHCCCCCCCCHHHCCCCC GLMFGYANNETDVLMPAPITYAHALVKRQSEVRKNGTLPWLRPDAKSQVTFAYDDGKIVG CEEEEECCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCEEEE IDAVVLSTQHRDDVSQADLIEGVMETIIKPVLPAQWLNKDTKFFINPTGRFVIGGPVGDC EEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCHHHCCCCCEEEECCCCCEEECCCCCCC GLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVS CCCCCEEEEECCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE YAIGVAEPTSISIETFGTGKVSEDLLIKLVRQHFELRPYGLTAMLDLARPIYQATAAYGH EEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHC FGRNEFPWEATDKAEALRADAGL CCCCCCCCCCCCHHHHHHHCCCC >Mature Secondary Structure AKHLFTSESVSEGHPDKIADQISDAVLDAILAQDPKARVACETYVKTGMVLVGGEVTTS CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCEEEECCCCCCH AWVDIEEITRKTVREIGYTHSDMGFDADSCAVLNAIGKQSPDINQGVDRADPAEQGAGDQ HCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCHHCCCCCCCCHHHCCCCC GLMFGYANNETDVLMPAPITYAHALVKRQSEVRKNGTLPWLRPDAKSQVTFAYDDGKIVG CEEEEECCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCEEEE IDAVVLSTQHRDDVSQADLIEGVMETIIKPVLPAQWLNKDTKFFINPTGRFVIGGPVGDC EEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCHHHCCCCCEEEECCCCCEEECCCCCCC GLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVS CCCCCEEEEECCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE YAIGVAEPTSISIETFGTGKVSEDLLIKLVRQHFELRPYGLTAMLDLARPIYQATAAYGH EEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHC FGRNEFPWEATDKAEALRADAGL CCCCCCCCCCCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA