| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160876756
Identifier: 160876756
GI number: 160876756
Start: 4305497
End: 4307734
Strand: Direct
Name: 160876756
Synonym: Sbal195_3650
Alternate gene names: NA
Gene position: 4305497-4307734 (Clockwise)
Preceding gene: 160876755
Following gene: 160876766
Centisome position: 80.52
GC content: 48.48
Gene sequence:
>2238_bases ATGCTGAAGAATAACCCAAGCACGTATCCCCTAGCGCCGCTGCTCTCTTTAACTCAAGGGATCCATTGGTCGCATCAACG CTTATTAGCCGTTGCAAGCCAGCTCTCTATGCTGGTGATTGGCATGATCATTTTAACCAATTTAATCATTACCTTAGGCG AACGACGTCTACAGGAAGAATGGGCGACACAGAGATACAGTGAACTGCAAACCATAGGCACACTGATCACAGATAAAGTG TCTTTCCAGCAATTTCGTACCCAAATTTTTGCCAATGGTGAGCTGCTAAAGCAGTACTTGAGCAATCCAACCGCCAAGCA ACAACTCAAATTACAGGAAGCCTGGCTAGATCTAGTGAAGCATATTCCTGAACTGCTCGGCATTGCGCTGTACGATCCCC AAGGCAATTATAAGTTCTCTACCCCTTCGAATTTCAGTAAAGATGCCTTACCGCCGACCTTGCTTGGCGCGAGTCGTAAT ATGGGCGGTAAAGAGGTTTACACCTCGCCACTGGAGTTTGTTCCGATTGAAGGCATGCTAGAACCCTATATGTATCAAAT GGCGTGGCTCGAAAAGCCCGATCAAAGTTCTATGGGTTATCTAGTGACGTACAACTCTATGGTGCAAATGCTCGAAGCCA TCAAGCCGGCTTTTTCGAGCAATAAGTCGCCTATGTTAGTGCTCGACACCCAGGGATTACTCTATGCTGGCGCGAGCGAT CTCGCCCCGTTAAGCAATATGCCAGAAACCTTAGGGGCAAGTTTAAGACAAAGTTACCCCGCTCTGTGGCGTGATATGTC CATGAGTAATTTTGGTCAATTCCACGGTGAAGAAGCCACCTTTGTTTACCTTAAGATCGAGCTTACCGCCCAGCCAGAAA CCCGCAGAGAATACTTTTTACTCTCCTATGTGCGTAACTCCGACATAGCCGCACGTTTTTCCCAGTGGCAAAACATTGTC ATAGTGGCATCGCTGATCTTAACCGTACTCGCCGCTTGGGTTGTGCTGCTCAGCCACATGTATCGCTTGCAACAGCGTTC ACGCCAATACAGTATCGATGTCGCCAATGGCTTATTTAACAGTGATATCGGCTTTATGATGGTCAACGAAAACGCCAGAG TGATCAGCGCCAACACCAAGGCGGCAGAAGCGACCTTAGTGCCACTCGATGAACTCACGGACCGCAGCCTACAACGCACC TTATGCCTCGATGACAGAACCTATGCCGAGCTGATGGAGCAAGTGCATAAAACGGGTCAATGGTCTGGTGAAATCAGCCT AGAAAGTATCAATGGTCCCACGCTGCGGGTGCATATCCGCCAAGCGCCAAGGGCGAGCCGAGGGTCACCGCATCTATTGA TCACCCTTGAAGACATCAGTGAATTAGTCAGCAGTAAAGAACAAGCATTTCTCAGTGAGCTTTTATGCGATAGCACAGTG GCGACAGCGCTGACTGATGCCAACGGTAAACTGATTAAAATCAACCCCGTATTTGATGCGCTAATGCAACTCAATGGCGA CTTAAATCAAGATTTAGCCTCGCTGCTCGCCAACGATTTAGGTAATCAATGGCAAAGAATTAGCGCTCAAATTGCCATGC AAGGTCAGTGGCAAGGGCAAATTCTGTGCTCACCTAAACAGGCGCACTCCAATTGTTTACAGGCGACCTTGAAGGGCCAT GTGGCCGCCGATGGTGAGATTGATTATATCGTCTGTACCTTAGAACAAGCCGCCGAACGCGGCCGAGGCACAGAGAAACG CAGCCTTGTGCCCCATCGCAGTACGATTCTGCTGAGCTTAGTTGATTTAGAGCGTTACTTTAACTCGCTGCCGCCGCCAA GCCGCCTGAGTTCAAGCTTACTGCTAATGGATATCAACCCTGAAGGTTTGCTGAGCCACATGAGTGACATAGACCAGCTG GCAAACCGCCAGCAGGAAGTCGAAGTTCAATTACTGCTTGAAATTCCTGCTAATTATCAGATTTTGCATTGGCAACTCGG GAAACTGATTGTGATGTTACCTGACACAGATGCCACCCATGCGCACAACTTTGCCCTCAATATGATGGAAAAGCTCAATG GCAATGGCTTAGGCGAAGGGATCAGTATCGGGATTGCCGGTTATCAAGAAGGCCAGACACTTGAGCAGTATCTGAATAAT GCCGAAGTCGCCCTAAAACGGGCGAAACAGAATAACGATCAAAATATCGGTCAGGCCTTTACTCGTCATCAATCGTAG
Upstream 100 bases:
>100_bases CTTTTACTAAGGAAATCTTGCTTAGTAACTTGGCACTGTCGTAACAATTCTTTCGTGTTAACATAGCGAAATTAACAGAT CACCCACTCATAATCGGTTC
Downstream 100 bases:
>100_bases ATTCGGGCATGTTGACCGAATCGGGCAATTGGCTCTGGGTAATCTCAATAATCGTCGAGCGGTTCATGGTGATTTTGTAG CGAATATACTGCGGGGCCTC
Product: putative diguanylate cyclase
Products: NA
Alternate protein names: Diguanylate Cyclase; PAS/PAC Sensor Protein
Number of amino acids: Translated: 745; Mature: 745
Protein sequence:
>745_residues MLKNNPSTYPLAPLLSLTQGIHWSHQRLLAVASQLSMLVIGMIILTNLIITLGERRLQEEWATQRYSELQTIGTLITDKV SFQQFRTQIFANGELLKQYLSNPTAKQQLKLQEAWLDLVKHIPELLGIALYDPQGNYKFSTPSNFSKDALPPTLLGASRN MGGKEVYTSPLEFVPIEGMLEPYMYQMAWLEKPDQSSMGYLVTYNSMVQMLEAIKPAFSSNKSPMLVLDTQGLLYAGASD LAPLSNMPETLGASLRQSYPALWRDMSMSNFGQFHGEEATFVYLKIELTAQPETRREYFLLSYVRNSDIAARFSQWQNIV IVASLILTVLAAWVVLLSHMYRLQQRSRQYSIDVANGLFNSDIGFMMVNENARVISANTKAAEATLVPLDELTDRSLQRT LCLDDRTYAELMEQVHKTGQWSGEISLESINGPTLRVHIRQAPRASRGSPHLLITLEDISELVSSKEQAFLSELLCDSTV ATALTDANGKLIKINPVFDALMQLNGDLNQDLASLLANDLGNQWQRISAQIAMQGQWQGQILCSPKQAHSNCLQATLKGH VAADGEIDYIVCTLEQAAERGRGTEKRSLVPHRSTILLSLVDLERYFNSLPPPSRLSSSLLLMDINPEGLLSHMSDIDQL ANRQQEVEVQLLLEIPANYQILHWQLGKLIVMLPDTDATHAHNFALNMMEKLNGNGLGEGISIGIAGYQEGQTLEQYLNN AEVALKRAKQNNDQNIGQAFTRHQS
Sequences:
>Translated_745_residues MLKNNPSTYPLAPLLSLTQGIHWSHQRLLAVASQLSMLVIGMIILTNLIITLGERRLQEEWATQRYSELQTIGTLITDKV SFQQFRTQIFANGELLKQYLSNPTAKQQLKLQEAWLDLVKHIPELLGIALYDPQGNYKFSTPSNFSKDALPPTLLGASRN MGGKEVYTSPLEFVPIEGMLEPYMYQMAWLEKPDQSSMGYLVTYNSMVQMLEAIKPAFSSNKSPMLVLDTQGLLYAGASD LAPLSNMPETLGASLRQSYPALWRDMSMSNFGQFHGEEATFVYLKIELTAQPETRREYFLLSYVRNSDIAARFSQWQNIV IVASLILTVLAAWVVLLSHMYRLQQRSRQYSIDVANGLFNSDIGFMMVNENARVISANTKAAEATLVPLDELTDRSLQRT LCLDDRTYAELMEQVHKTGQWSGEISLESINGPTLRVHIRQAPRASRGSPHLLITLEDISELVSSKEQAFLSELLCDSTV ATALTDANGKLIKINPVFDALMQLNGDLNQDLASLLANDLGNQWQRISAQIAMQGQWQGQILCSPKQAHSNCLQATLKGH VAADGEIDYIVCTLEQAAERGRGTEKRSLVPHRSTILLSLVDLERYFNSLPPPSRLSSSLLLMDINPEGLLSHMSDIDQL ANRQQEVEVQLLLEIPANYQILHWQLGKLIVMLPDTDATHAHNFALNMMEKLNGNGLGEGISIGIAGYQEGQTLEQYLNN AEVALKRAKQNNDQNIGQAFTRHQS >Mature_745_residues MLKNNPSTYPLAPLLSLTQGIHWSHQRLLAVASQLSMLVIGMIILTNLIITLGERRLQEEWATQRYSELQTIGTLITDKV SFQQFRTQIFANGELLKQYLSNPTAKQQLKLQEAWLDLVKHIPELLGIALYDPQGNYKFSTPSNFSKDALPPTLLGASRN MGGKEVYTSPLEFVPIEGMLEPYMYQMAWLEKPDQSSMGYLVTYNSMVQMLEAIKPAFSSNKSPMLVLDTQGLLYAGASD LAPLSNMPETLGASLRQSYPALWRDMSMSNFGQFHGEEATFVYLKIELTAQPETRREYFLLSYVRNSDIAARFSQWQNIV IVASLILTVLAAWVVLLSHMYRLQQRSRQYSIDVANGLFNSDIGFMMVNENARVISANTKAAEATLVPLDELTDRSLQRT LCLDDRTYAELMEQVHKTGQWSGEISLESINGPTLRVHIRQAPRASRGSPHLLITLEDISELVSSKEQAFLSELLCDSTV ATALTDANGKLIKINPVFDALMQLNGDLNQDLASLLANDLGNQWQRISAQIAMQGQWQGQILCSPKQAHSNCLQATLKGH VAADGEIDYIVCTLEQAAERGRGTEKRSLVPHRSTILLSLVDLERYFNSLPPPSRLSSSLLLMDINPEGLLSHMSDIDQL ANRQQEVEVQLLLEIPANYQILHWQLGKLIVMLPDTDATHAHNFALNMMEKLNGNGLGEGISIGIAGYQEGQTLEQYLNN AEVALKRAKQNNDQNIGQAFTRHQS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 83264; Mature: 83264
Theoretical pI: Translated: 5.50; Mature: 5.50
Prosite motif: PS50887 GGDEF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKNNPSTYPLAPLLSLTQGIHWSHQRLLAVASQLSMLVIGMIILTNLIITLGERRLQEE CCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WATQRYSELQTIGTLITDKVSFQQFRTQIFANGELLKQYLSNPTAKQQLKLQEAWLDLVK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHH HIPELLGIALYDPQGNYKFSTPSNFSKDALPPTLLGASRNMGGKEVYTSPLEFVPIEGML HHHHHHCEEEECCCCCEEECCCCCCCCCCCCCHHCCCCCCCCCCHHCCCCCCEECCHHHH EPYMYQMAWLEKPDQSSMGYLVTYNSMVQMLEAIKPAFSSNKSPMLVLDTQGLLYAGASD HHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEECCCC LAPLSNMPETLGASLRQSYPALWRDMSMSNFGQFHGEEATFVYLKIELTAQPETRREYFL CCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCEEEEEEEEEEECCCCCHHHHHH LSYVRNSDIAARFSQWQNIVIVASLILTVLAAWVVLLSHMYRLQQRSRQYSIDVANGLFN HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHCCCCC SDIGFMMVNENARVISANTKAAEATLVPLDELTDRSLQRTLCLDDRTYAELMEQVHKTGQ CCCCEEEECCCCEEEECCCCCCCEEEECHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCC WSGEISLESINGPTLRVHIRQAPRASRGSPHLLITLEDISELVSSKEQAFLSELLCDSTV CCCCEEEEECCCCEEEEEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH ATALTDANGKLIKINPVFDALMQLNGDLNQDLASLLANDLGNQWQRISAQIAMQGQWQGQ HHHEECCCCCEEEECHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCC ILCSPKQAHSNCLQATLKGHVAADGEIDYIVCTLEQAAERGRGTEKRSLVPHRSTILLSL EEECCHHHHHHHHHHHHHCCEECCCCEEEEEEEHHHHHHCCCCCCHHCCCCCCHHHHHHH VDLERYFNSLPPPSRLSSSLLLMDINPEGLLSHMSDIDQLANRQQEVEVQLLLEIPANYQ HHHHHHHHCCCCHHHCCCCEEEEECCHHHHHHHHHHHHHHHCCHHHCEEEEEEECCCCCE ILHWQLGKLIVMLPDTDATHAHNFALNMMEKLNGNGLGEGISIGIAGYQEGQTLEQYLNN EEEEEECCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHCC AEVALKRAKQNNDQNIGQAFTRHQS HHHHHHHHHCCCCCHHHHHHHCCCC >Mature Secondary Structure MLKNNPSTYPLAPLLSLTQGIHWSHQRLLAVASQLSMLVIGMIILTNLIITLGERRLQEE CCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WATQRYSELQTIGTLITDKVSFQQFRTQIFANGELLKQYLSNPTAKQQLKLQEAWLDLVK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHH HIPELLGIALYDPQGNYKFSTPSNFSKDALPPTLLGASRNMGGKEVYTSPLEFVPIEGML HHHHHHCEEEECCCCCEEECCCCCCCCCCCCCHHCCCCCCCCCCHHCCCCCCEECCHHHH EPYMYQMAWLEKPDQSSMGYLVTYNSMVQMLEAIKPAFSSNKSPMLVLDTQGLLYAGASD HHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEECCCC LAPLSNMPETLGASLRQSYPALWRDMSMSNFGQFHGEEATFVYLKIELTAQPETRREYFL CCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCEEEEEEEEEEECCCCCHHHHHH LSYVRNSDIAARFSQWQNIVIVASLILTVLAAWVVLLSHMYRLQQRSRQYSIDVANGLFN HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHCCCCC SDIGFMMVNENARVISANTKAAEATLVPLDELTDRSLQRTLCLDDRTYAELMEQVHKTGQ CCCCEEEECCCCEEEECCCCCCCEEEECHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCC WSGEISLESINGPTLRVHIRQAPRASRGSPHLLITLEDISELVSSKEQAFLSELLCDSTV CCCCEEEEECCCCEEEEEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH ATALTDANGKLIKINPVFDALMQLNGDLNQDLASLLANDLGNQWQRISAQIAMQGQWQGQ HHHEECCCCCEEEECHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCC ILCSPKQAHSNCLQATLKGHVAADGEIDYIVCTLEQAAERGRGTEKRSLVPHRSTILLSL EEECCHHHHHHHHHHHHHCCEECCCCEEEEEEEHHHHHHCCCCCCHHCCCCCCHHHHHHH VDLERYFNSLPPPSRLSSSLLLMDINPEGLLSHMSDIDQLANRQQEVEVQLLLEIPANYQ HHHHHHHHCCCCHHHCCCCEEEEECCHHHHHHHHHHHHHHHCCHHHCEEEEEEECCCCCE ILHWQLGKLIVMLPDTDATHAHNFALNMMEKLNGNGLGEGISIGIAGYQEGQTLEQYLNN EEEEEECCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHCC AEVALKRAKQNNDQNIGQAFTRHQS HHHHHHHHHCCCCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA