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The map label for this gene is glpD [H]

Identifier: 160876726

GI number: 160876726

Start: 4269009

End: 4270184

Strand: Reverse

Name: glpD [H]

Synonym: Sbal195_3620

Alternate gene names: 160876726

Gene position: 4270184-4269009 (Counterclockwise)

Preceding gene: 160876727

Following gene: 160876725

Centisome position: 79.86

GC content: 49.66

Gene sequence:

>1176_bases
ATGGCCAGTTTCGATATAGCCATTATTGGCGGTGGGATCAGCGGTGTCGGCATTGCCCAATATGCGGCAGCGGCGGGCTA
TTCCACCTTGCTGATTGAAAGGGGCGAAATTGGCGGCCAAACCTCGGCTAATTCCAGCAAGCTTATCCACGGCGGCTTAC
GCTATTTAGAAACCGGGCAAATCAATTTAGTCCGTAAGTCCTTGCTTGAACGGCGCCATTTACTCAATCTTGCGCCCACT
CTGGTTAAAGCTGTGCCTTTTTATATTCCAGTGTATGACAACAGTCAGCGCAGTCCCTGGACTATTCGCGCGGGCTTAAG
CATGTATGCGCTGCTGAGTGAGTTTGATCCCTTGGGCCAATTTGTGTCTGTGCCTGCCGTGCATTGGCATCGTTTTAAAG
GATTGAAATTCAAAGGATTAAAGGCGGTATTTCAGTATTGGGATGCGCAGACCGACGATAAGTTGTTAACTCAAGCGGTG
GCGCGCAGCGCGCAGGCTCTGGGCGCCGAAGTCTATGCCGAGGCTGAATTTCTTGAGCTGGAACATAGGCGCGAAACTTG
TGAGCTGAGTTTTAGCCACAGGGGCGAAATCCATAAAGCCGAAGCGAGTCTAGTGATCAATGCTGCCGGCCCTTGGGTGA
ATGCGGTTTTAAGTAAAGTCTTGCCTCCACTTGCGGGTGTTGAACTCGATTGGGTGCAAGGCGCCCATGTGCTACTGGAT
ATTCCTGCGCCCGATGGCATCTTGTATTTAGAGTCTTGCTTCGATAAGCGGGTCATATTTGTGATGCCTTGGTATGGGCA
AACTTTGGTTGGCACCACAGAAACGGAACTGGCGTCTTTAGATAAACCACCCCAAGCGACCGAATCTGAAATTAATTATC
TGCTTGGAATTTATAAGCATTACTTCCCGTTAACGCCGGAGATTGATGAGATTAAGACAAAGATAACTCAGACCTTCTGC
GGCATTCGGGTTTTACCTAAGCAAAATAGCCAAGCCTTTGAGCGGCCGCGGGATACCTTGATGAAAACATCGATTTCCCA
TCCGCGCATCCTCAGTTTATACGGCGGTAAGTTAACGACGTTTCGCAGCACCTCGGCAGAAGTACTTGAATGGATTGAAA
AGGCCCTTGGTAAGCGCGAGGCGATTGCCGATGTTGATAAACTCAGCTTGTCTTGA

Upstream 100 bases:

>100_bases
TTATTGACATATTAACGCTTATTAGCTGTTCGACTGAGCTTGATTGAATGCATGAGGCTCAGTAGGTCGGTCGTCTATGG
AACGTTAGCGAGAGTGAGTT

Downstream 100 bases:

>100_bases
ATAAACCTAAAATTGCGCCCTTGGTACTGGTTGAGTGTGTTTCGAGATGATTTTTACCCGTAAAACCGCTACAGTGTGGC
GCTTTTTTACTGAATCTAGG

Product: FAD dependent oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 391; Mature: 390

Protein sequence:

>391_residues
MASFDIAIIGGGISGVGIAQYAAAAGYSTLLIERGEIGGQTSANSSKLIHGGLRYLETGQINLVRKSLLERRHLLNLAPT
LVKAVPFYIPVYDNSQRSPWTIRAGLSMYALLSEFDPLGQFVSVPAVHWHRFKGLKFKGLKAVFQYWDAQTDDKLLTQAV
ARSAQALGAEVYAEAEFLELEHRRETCELSFSHRGEIHKAEASLVINAAGPWVNAVLSKVLPPLAGVELDWVQGAHVLLD
IPAPDGILYLESCFDKRVIFVMPWYGQTLVGTTETELASLDKPPQATESEINYLLGIYKHYFPLTPEIDEIKTKITQTFC
GIRVLPKQNSQAFERPRDTLMKTSISHPRILSLYGGKLTTFRSTSAEVLEWIEKALGKREAIADVDKLSLS

Sequences:

>Translated_391_residues
MASFDIAIIGGGISGVGIAQYAAAAGYSTLLIERGEIGGQTSANSSKLIHGGLRYLETGQINLVRKSLLERRHLLNLAPT
LVKAVPFYIPVYDNSQRSPWTIRAGLSMYALLSEFDPLGQFVSVPAVHWHRFKGLKFKGLKAVFQYWDAQTDDKLLTQAV
ARSAQALGAEVYAEAEFLELEHRRETCELSFSHRGEIHKAEASLVINAAGPWVNAVLSKVLPPLAGVELDWVQGAHVLLD
IPAPDGILYLESCFDKRVIFVMPWYGQTLVGTTETELASLDKPPQATESEINYLLGIYKHYFPLTPEIDEIKTKITQTFC
GIRVLPKQNSQAFERPRDTLMKTSISHPRILSLYGGKLTTFRSTSAEVLEWIEKALGKREAIADVDKLSLS
>Mature_390_residues
ASFDIAIIGGGISGVGIAQYAAAAGYSTLLIERGEIGGQTSANSSKLIHGGLRYLETGQINLVRKSLLERRHLLNLAPTL
VKAVPFYIPVYDNSQRSPWTIRAGLSMYALLSEFDPLGQFVSVPAVHWHRFKGLKFKGLKAVFQYWDAQTDDKLLTQAVA
RSAQALGAEVYAEAEFLELEHRRETCELSFSHRGEIHKAEASLVINAAGPWVNAVLSKVLPPLAGVELDWVQGAHVLLDI
PAPDGILYLESCFDKRVIFVMPWYGQTLVGTTETELASLDKPPQATESEINYLLGIYKHYFPLTPEIDEIKTKITQTFCG
IRVLPKQNSQAFERPRDTLMKTSISHPRILSLYGGKLTTFRSTSAEVLEWIEKALGKREAIADVDKLSLS

Specific function: Conversion Of Glycerol 3-Phosphate To Dihydroxyacetone. Uses Molecular Oxygen Or Nitrate As Electron Acceptor. [C]

COG id: COG0578

COG function: function code C; Glycerol-3-phosphate dehydrogenase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI285002233, Length=398, Percent_Identity=29.1457286432161, Blast_Score=142, Evalue=6e-34,
Organism=Homo sapiens, GI285002231, Length=398, Percent_Identity=29.1457286432161, Blast_Score=142, Evalue=6e-34,
Organism=Escherichia coli, GI2367226, Length=360, Percent_Identity=33.0555555555556, Blast_Score=152, Evalue=4e-38,
Organism=Caenorhabditis elegans, GI115534726, Length=389, Percent_Identity=29.5629820051414, Blast_Score=117, Evalue=1e-26,
Organism=Caenorhabditis elegans, GI17509253, Length=393, Percent_Identity=27.735368956743, Blast_Score=117, Evalue=1e-26,
Organism=Saccharomyces cerevisiae, GI6322036, Length=407, Percent_Identity=28.009828009828, Blast_Score=119, Evalue=9e-28,
Organism=Drosophila melanogaster, GI161077125, Length=396, Percent_Identity=29.040404040404, Blast_Score=124, Evalue=1e-28,
Organism=Drosophila melanogaster, GI24653942, Length=396, Percent_Identity=29.040404040404, Blast_Score=124, Evalue=1e-28,
Organism=Drosophila melanogaster, GI24653944, Length=396, Percent_Identity=29.040404040404, Blast_Score=124, Evalue=1e-28,
Organism=Drosophila melanogaster, GI20130025, Length=396, Percent_Identity=29.040404040404, Blast_Score=124, Evalue=1e-28,
Organism=Drosophila melanogaster, GI24586295, Length=382, Percent_Identity=29.8429319371728, Blast_Score=111, Evalue=1e-24,
Organism=Drosophila melanogaster, GI19921278, Length=402, Percent_Identity=24.8756218905473, Blast_Score=77, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006076
- InterPro:   IPR000447 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: =1.1.5.3 [H]

Molecular weight: Translated: 43271; Mature: 43140

Theoretical pI: Translated: 7.07; Mature: 7.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASFDIAIIGGGISGVGIAQYAAAAGYSTLLIERGEIGGQTSANSSKLIHGGLRYLETGQ
CCCEEEEEEECCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHCHHHHCCCC
INLVRKSLLERRHLLNLAPTLVKAVPFYIPVYDNSQRSPWTIRAGLSMYALLSEFDPLGQ
HHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCEEEECCHHHHHHHHHCCHHHH
FVSVPAVHWHRFKGLKFKGLKAVFQYWDAQTDDKLLTQAVARSAQALGAEVYAEAEFLEL
HHCCCCHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHH
EHRRETCELSFSHRGEIHKAEASLVINAAGPWVNAVLSKVLPPLAGVELDWVQGAHVLLD
HHHHHHEEECCCCCCCEEECCEEEEEECCCHHHHHHHHHHCCCCCCCEEEEECCCEEEEE
IPAPDGILYLESCFDKRVIFVMPWYGQTLVGTTETELASLDKPPQATESEINYLLGIYKH
CCCCCCEEEEEHHHCCCEEEEECCCCCEEECCCHHHHHHCCCCCCCCHHHHHHHHHHHHH
YFPLTPEIDEIKTKITQTFCGIRVLPKQNSQAFERPRDTLMKTSISHPRILSLYGGKLTT
HCCCCCCHHHHHHHHHHHHHCEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEECCCEEEE
FRSTSAEVLEWIEKALGKREAIADVDKLSLS
ECCCHHHHHHHHHHHHCCHHHHHHHHHHCCC
>Mature Secondary Structure 
ASFDIAIIGGGISGVGIAQYAAAAGYSTLLIERGEIGGQTSANSSKLIHGGLRYLETGQ
CCEEEEEEECCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHCHHHHCCCC
INLVRKSLLERRHLLNLAPTLVKAVPFYIPVYDNSQRSPWTIRAGLSMYALLSEFDPLGQ
HHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCEEEECCHHHHHHHHHCCHHHH
FVSVPAVHWHRFKGLKFKGLKAVFQYWDAQTDDKLLTQAVARSAQALGAEVYAEAEFLEL
HHCCCCHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHH
EHRRETCELSFSHRGEIHKAEASLVINAAGPWVNAVLSKVLPPLAGVELDWVQGAHVLLD
HHHHHHEEECCCCCCCEEECCEEEEEECCCHHHHHHHHHHCCCCCCCEEEEECCCEEEEE
IPAPDGILYLESCFDKRVIFVMPWYGQTLVGTTETELASLDKPPQATESEINYLLGIYKH
CCCCCCEEEEEHHHCCCEEEEECCCCCEEECCCHHHHHHCCCCCCCCHHHHHHHHHHHHH
YFPLTPEIDEIKTKITQTFCGIRVLPKQNSQAFERPRDTLMKTSISHPRILSLYGGKLTT
HCCCCCCHHHHHHHHHHHHHCEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEECCCEEEE
FRSTSAEVLEWIEKALGKREAIADVDKLSLS
ECCCHHHHHHHHHHHHCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]