| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is yyaM [H]
Identifier: 160876684
GI number: 160876684
Start: 4207395
End: 4208285
Strand: Direct
Name: yyaM [H]
Synonym: Sbal195_3578
Alternate gene names: 160876684
Gene position: 4207395-4208285 (Clockwise)
Preceding gene: 160876682
Following gene: 160876685
Centisome position: 78.68
GC content: 49.05
Gene sequence:
>891_bases ATGTTGTATTTGTTTCCCCTATTAGCCGTTTTCATTTGGGCGGGTAACTCGATAGTTAATAAACTCTCATTTGGGATTAT CGATCCTGAAGCCATAGCGTTTTACCGTTGGTTTTTTGCAATGTTGCTATTAACGCCCTTTGTCGCGCGACGCGTGTGGC AAAAGCGCCGAGTGATCTTGCTGCTGTTACCTAAGTTGGCGACTTTGGCCATGCTAGGTATGGTGCTCAACCAGAGTCTG GCCTATTTTGCCGCGGCCACCACCACGGCGACGAATATGGCATTGATCACTTCACTCGTGCCTATGATCAGCCTGTTTTT AGCCGTTCCCTTACTCAAACAGAAGCTGTCGCCGTTAGCCTTTGGTGGCACACTGATCTCGCTCGTTGGCTTAATTTTTA TGTTGAGTCACGGCGATATGATGAATCTTGCCATCGGCGTCACCCAAGGTGACTTGTTATTGCTGTTCAGCGCTTTTGTG TATGCACTCTATGGTGTATTACTAAAACGCTGGCAATTACCACTGCCCACTTGGGAATCGGTTTATATTCAAGGACTCAT AGCCGTATTTATGCTGACACCGCTGCTGTTCAGTAGCCCAAGTATGGCGATCAGCACGCAATCGGCACCACTGATCCTGT ATGCCGCCGTTGCGGCCTCGCTGCTCGCGCCATGGGCTTGGATCAATGGCATCAGCAAACTCGGCGCCGATCGCACCAGC GTGTTCTTTAATTTAATGCCGATTATTGCGGCGATATTGGCGGCCATTATCCTAGATGAAACCTTGGCCATTTATCATTA CATTGGGGGCTCTATGGTCATCATGGGTGTCATGCTAGTGCAGATAAAGCCTAAGCCAAAAGCCATCCCCACCTTAGCTT GCCCCGAATAA
Upstream 100 bases:
>100_bases TCTCTCGTTCTGAGTTACTCAGTTTTAGCAATGTAGACTCAGTCGCTTATGCCTATTCACTCATGTCCAGCCACGTAAAC CATTATCGAAAGGCAAAATC
Downstream 100 bases:
>100_bases CATAAGCTAAAATATCAAAGCCCTGGCTGCACAGTCGGGGCGATTCACTTTCGTTCAATGGACACAAAACTTCGCACCGA ATCCCATCGCAATTTACTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 296; Mature: 296
Protein sequence:
>296_residues MLYLFPLLAVFIWAGNSIVNKLSFGIIDPEAIAFYRWFFAMLLLTPFVARRVWQKRRVILLLLPKLATLAMLGMVLNQSL AYFAAATTTATNMALITSLVPMISLFLAVPLLKQKLSPLAFGGTLISLVGLIFMLSHGDMMNLAIGVTQGDLLLLFSAFV YALYGVLLKRWQLPLPTWESVYIQGLIAVFMLTPLLFSSPSMAISTQSAPLILYAAVAASLLAPWAWINGISKLGADRTS VFFNLMPIIAAILAAIILDETLAIYHYIGGSMVIMGVMLVQIKPKPKAIPTLACPE
Sequences:
>Translated_296_residues MLYLFPLLAVFIWAGNSIVNKLSFGIIDPEAIAFYRWFFAMLLLTPFVARRVWQKRRVILLLLPKLATLAMLGMVLNQSL AYFAAATTTATNMALITSLVPMISLFLAVPLLKQKLSPLAFGGTLISLVGLIFMLSHGDMMNLAIGVTQGDLLLLFSAFV YALYGVLLKRWQLPLPTWESVYIQGLIAVFMLTPLLFSSPSMAISTQSAPLILYAAVAASLLAPWAWINGISKLGADRTS VFFNLMPIIAAILAAIILDETLAIYHYIGGSMVIMGVMLVQIKPKPKAIPTLACPE >Mature_296_residues MLYLFPLLAVFIWAGNSIVNKLSFGIIDPEAIAFYRWFFAMLLLTPFVARRVWQKRRVILLLLPKLATLAMLGMVLNQSL AYFAAATTTATNMALITSLVPMISLFLAVPLLKQKLSPLAFGGTLISLVGLIFMLSHGDMMNLAIGVTQGDLLLLFSAFV YALYGVLLKRWQLPLPTWESVYIQGLIAVFMLTPLLFSSPSMAISTQSAPLILYAAVAASLLAPWAWINGISKLGADRTS VFFNLMPIIAAILAAIILDETLAIYHYIGGSMVIMGVMLVQIKPKPKAIPTLACPE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 DUF6 domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 32369; Mature: 32369
Theoretical pI: Translated: 10.08; Mature: 10.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLYLFPLLAVFIWAGNSIVNKLSFGIIDPEAIAFYRWFFAMLLLTPFVARRVWQKRRVIL CHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH LLLPKLATLAMLGMVLNQSLAYFAAATTTATNMALITSLVPMISLFLAVPLLKQKLSPLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH FGGTLISLVGLIFMLSHGDMMNLAIGVTQGDLLLLFSAFVYALYGVLLKRWQLPLPTWES HHHHHHHHHHHHHHHCCCCHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH VYIQGLIAVFMLTPLLFSSPSMAISTQSAPLILYAAVAASLLAPWAWINGISKLGADRTS HHHHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH VFFNLMPIIAAILAAIILDETLAIYHYIGGSMVIMGVMLVQIKPKPKAIPTLACPE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCC >Mature Secondary Structure MLYLFPLLAVFIWAGNSIVNKLSFGIIDPEAIAFYRWFFAMLLLTPFVARRVWQKRRVIL CHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH LLLPKLATLAMLGMVLNQSLAYFAAATTTATNMALITSLVPMISLFLAVPLLKQKLSPLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH FGGTLISLVGLIFMLSHGDMMNLAIGVTQGDLLLLFSAFVYALYGVLLKRWQLPLPTWES HHHHHHHHHHHHHHHCCCCHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH VYIQGLIAVFMLTPLLFSSPSMAISTQSAPLILYAAVAASLLAPWAWINGISKLGADRTS HHHHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH VFFNLMPIIAAILAAIILDETLAIYHYIGGSMVIMGVMLVQIKPKPKAIPTLACPE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7584024; 9384377 [H]