Definition Shewanella baltica OS195 chromosome, complete genome.
Accession NC_009997
Length 5,347,283

Click here to switch to the map view.

The map label for this gene is yyaM [H]

Identifier: 160876684

GI number: 160876684

Start: 4207395

End: 4208285

Strand: Direct

Name: yyaM [H]

Synonym: Sbal195_3578

Alternate gene names: 160876684

Gene position: 4207395-4208285 (Clockwise)

Preceding gene: 160876682

Following gene: 160876685

Centisome position: 78.68

GC content: 49.05

Gene sequence:

>891_bases
ATGTTGTATTTGTTTCCCCTATTAGCCGTTTTCATTTGGGCGGGTAACTCGATAGTTAATAAACTCTCATTTGGGATTAT
CGATCCTGAAGCCATAGCGTTTTACCGTTGGTTTTTTGCAATGTTGCTATTAACGCCCTTTGTCGCGCGACGCGTGTGGC
AAAAGCGCCGAGTGATCTTGCTGCTGTTACCTAAGTTGGCGACTTTGGCCATGCTAGGTATGGTGCTCAACCAGAGTCTG
GCCTATTTTGCCGCGGCCACCACCACGGCGACGAATATGGCATTGATCACTTCACTCGTGCCTATGATCAGCCTGTTTTT
AGCCGTTCCCTTACTCAAACAGAAGCTGTCGCCGTTAGCCTTTGGTGGCACACTGATCTCGCTCGTTGGCTTAATTTTTA
TGTTGAGTCACGGCGATATGATGAATCTTGCCATCGGCGTCACCCAAGGTGACTTGTTATTGCTGTTCAGCGCTTTTGTG
TATGCACTCTATGGTGTATTACTAAAACGCTGGCAATTACCACTGCCCACTTGGGAATCGGTTTATATTCAAGGACTCAT
AGCCGTATTTATGCTGACACCGCTGCTGTTCAGTAGCCCAAGTATGGCGATCAGCACGCAATCGGCACCACTGATCCTGT
ATGCCGCCGTTGCGGCCTCGCTGCTCGCGCCATGGGCTTGGATCAATGGCATCAGCAAACTCGGCGCCGATCGCACCAGC
GTGTTCTTTAATTTAATGCCGATTATTGCGGCGATATTGGCGGCCATTATCCTAGATGAAACCTTGGCCATTTATCATTA
CATTGGGGGCTCTATGGTCATCATGGGTGTCATGCTAGTGCAGATAAAGCCTAAGCCAAAAGCCATCCCCACCTTAGCTT
GCCCCGAATAA

Upstream 100 bases:

>100_bases
TCTCTCGTTCTGAGTTACTCAGTTTTAGCAATGTAGACTCAGTCGCTTATGCCTATTCACTCATGTCCAGCCACGTAAAC
CATTATCGAAAGGCAAAATC

Downstream 100 bases:

>100_bases
CATAAGCTAAAATATCAAAGCCCTGGCTGCACAGTCGGGGCGATTCACTTTCGTTCAATGGACACAAAACTTCGCACCGA
ATCCCATCGCAATTTACTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 296; Mature: 296

Protein sequence:

>296_residues
MLYLFPLLAVFIWAGNSIVNKLSFGIIDPEAIAFYRWFFAMLLLTPFVARRVWQKRRVILLLLPKLATLAMLGMVLNQSL
AYFAAATTTATNMALITSLVPMISLFLAVPLLKQKLSPLAFGGTLISLVGLIFMLSHGDMMNLAIGVTQGDLLLLFSAFV
YALYGVLLKRWQLPLPTWESVYIQGLIAVFMLTPLLFSSPSMAISTQSAPLILYAAVAASLLAPWAWINGISKLGADRTS
VFFNLMPIIAAILAAIILDETLAIYHYIGGSMVIMGVMLVQIKPKPKAIPTLACPE

Sequences:

>Translated_296_residues
MLYLFPLLAVFIWAGNSIVNKLSFGIIDPEAIAFYRWFFAMLLLTPFVARRVWQKRRVILLLLPKLATLAMLGMVLNQSL
AYFAAATTTATNMALITSLVPMISLFLAVPLLKQKLSPLAFGGTLISLVGLIFMLSHGDMMNLAIGVTQGDLLLLFSAFV
YALYGVLLKRWQLPLPTWESVYIQGLIAVFMLTPLLFSSPSMAISTQSAPLILYAAVAASLLAPWAWINGISKLGADRTS
VFFNLMPIIAAILAAIILDETLAIYHYIGGSMVIMGVMLVQIKPKPKAIPTLACPE
>Mature_296_residues
MLYLFPLLAVFIWAGNSIVNKLSFGIIDPEAIAFYRWFFAMLLLTPFVARRVWQKRRVILLLLPKLATLAMLGMVLNQSL
AYFAAATTTATNMALITSLVPMISLFLAVPLLKQKLSPLAFGGTLISLVGLIFMLSHGDMMNLAIGVTQGDLLLLFSAFV
YALYGVLLKRWQLPLPTWESVYIQGLIAVFMLTPLLFSSPSMAISTQSAPLILYAAVAASLLAPWAWINGISKLGADRTS
VFFNLMPIIAAILAAIILDETLAIYHYIGGSMVIMGVMLVQIKPKPKAIPTLACPE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 32369; Mature: 32369

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLYLFPLLAVFIWAGNSIVNKLSFGIIDPEAIAFYRWFFAMLLLTPFVARRVWQKRRVIL
CHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
LLLPKLATLAMLGMVLNQSLAYFAAATTTATNMALITSLVPMISLFLAVPLLKQKLSPLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
FGGTLISLVGLIFMLSHGDMMNLAIGVTQGDLLLLFSAFVYALYGVLLKRWQLPLPTWES
HHHHHHHHHHHHHHHCCCCHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
VYIQGLIAVFMLTPLLFSSPSMAISTQSAPLILYAAVAASLLAPWAWINGISKLGADRTS
HHHHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
VFFNLMPIIAAILAAIILDETLAIYHYIGGSMVIMGVMLVQIKPKPKAIPTLACPE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCC
>Mature Secondary Structure
MLYLFPLLAVFIWAGNSIVNKLSFGIIDPEAIAFYRWFFAMLLLTPFVARRVWQKRRVIL
CHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
LLLPKLATLAMLGMVLNQSLAYFAAATTTATNMALITSLVPMISLFLAVPLLKQKLSPLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
FGGTLISLVGLIFMLSHGDMMNLAIGVTQGDLLLLFSAFVYALYGVLLKRWQLPLPTWES
HHHHHHHHHHHHHHHCCCCHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
VYIQGLIAVFMLTPLLFSSPSMAISTQSAPLILYAAVAASLLAPWAWINGISKLGADRTS
HHHHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
VFFNLMPIIAAILAAIILDETLAIYHYIGGSMVIMGVMLVQIKPKPKAIPTLACPE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]