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The map label for this gene is 160876618

Identifier: 160876618

GI number: 160876618

Start: 4127929

End: 4128876

Strand: Reverse

Name: 160876618

Synonym: Sbal195_3512

Alternate gene names: NA

Gene position: 4128876-4127929 (Counterclockwise)

Preceding gene: 160876619

Following gene: 160876617

Centisome position: 77.21

GC content: 49.47

Gene sequence:

>948_bases
ATGAAGTTAATGAAATACTGTATCTCCCCGAGTAAGTTGGCTTGGTTACGCAAAGAATTGGGTAAAGATGCCAACGGCTT
GATTGCGGCAATGGATGCTGCGGGCACTGTTTATCTCGATAAGCTCAATGCATCGACCGAGGCGTTAGAGGGAGAGCCGT
TAGAAGGTGAGGTGGCTGAGACTGACACGCCCACCAATGCGAAGACTCAGACTCAGCGGCAAGCGCAGCGTCATTTGGCG
TATTTGTGGTTGCAGCAGCGGATTGCCTTAGCGACTCGCATCGATGATGCTGACATGGCGGCATTAGCGGCATTTGAATT
TCAACAGATCCACATTGAAGTGGTTCAACCATCGGAGTTTGATGCGGTTGTCGCGCGATTACAGGCTGAGCCAGTCCTAG
GTTTTGATACTGAAACCCGTGCGAGTTTTGAGCGCGGCGTACAACATCCCCTGAGCCTTATCCAAATCGCGACAGCGGAC
GCTTGTTATCTATTTCAACATGCCATTTTAGGTGAGCAATTCACCCAGTTAAAAACCGTATTAGAAGATGAAAATATACT
CAAAGTCGGCGTCGGTTTACGCAGTGATGCGCAGGCCCTCAAGCGGCAATGGGGCATCAATGTCACTTCAAAGTTAGATT
TAAACTGGGCACTGGCGCAACTTGGGGCGGAGAAAGAAATGGGGACGCGCCAGTTGGTGGCGACTCTGCTGGGTACCCGT
ATTGATAAGCCGAAAAAAATCACTCTATCGAATTGGCAGCATGTGCCATTATCTGGCGCGCAAATCGATTATGCCGCCGC
CGATGCCTTGGCGGCGCTCATGTGTTTCAATGCGTTAATCACTCAGCTAACGCCTTTTTATCATGCATCGAGTGCCACAA
AAGCCGCGCCGTTAATCCCATCAAGCTTAGTGGTACCATTAGCGAAATATTTTAAGGATGTTGAATGA

Upstream 100 bases:

>100_bases
CGCAGTCGCACTCGCAGTGATGACAGGGATACAAAAACTGCGTGGCGAGTGAGGTGCGTGCATCGAAAATCGAGGATTAA
CTCAACAAGGAAGGGCGACG

Downstream 100 bases:

>100_bases
AGTGCAAAACCCAAGATGCCGCAAAGGAAAACATCAGGCCATCACACTCGGATATGAGCTCGCAGGGCACCAGTACCTTA
GGTTTGATTTACCGCGTGCT

Product: 3'-5' exonuclease

Products: NA

Alternate protein names: 3-5' Exonuclease Domain Protein; 3- 5' Exonuclease Domain Protein; 3 Exoribonuclease Family Protein; Exonuclease

Number of amino acids: Translated: 315; Mature: 315

Protein sequence:

>315_residues
MKLMKYCISPSKLAWLRKELGKDANGLIAAMDAAGTVYLDKLNASTEALEGEPLEGEVAETDTPTNAKTQTQRQAQRHLA
YLWLQQRIALATRIDDADMAALAAFEFQQIHIEVVQPSEFDAVVARLQAEPVLGFDTETRASFERGVQHPLSLIQIATAD
ACYLFQHAILGEQFTQLKTVLEDENILKVGVGLRSDAQALKRQWGINVTSKLDLNWALAQLGAEKEMGTRQLVATLLGTR
IDKPKKITLSNWQHVPLSGAQIDYAAADALAALMCFNALITQLTPFYHASSATKAAPLIPSSLVVPLAKYFKDVE

Sequences:

>Translated_315_residues
MKLMKYCISPSKLAWLRKELGKDANGLIAAMDAAGTVYLDKLNASTEALEGEPLEGEVAETDTPTNAKTQTQRQAQRHLA
YLWLQQRIALATRIDDADMAALAAFEFQQIHIEVVQPSEFDAVVARLQAEPVLGFDTETRASFERGVQHPLSLIQIATAD
ACYLFQHAILGEQFTQLKTVLEDENILKVGVGLRSDAQALKRQWGINVTSKLDLNWALAQLGAEKEMGTRQLVATLLGTR
IDKPKKITLSNWQHVPLSGAQIDYAAADALAALMCFNALITQLTPFYHASSATKAAPLIPSSLVVPLAKYFKDVE
>Mature_315_residues
MKLMKYCISPSKLAWLRKELGKDANGLIAAMDAAGTVYLDKLNASTEALEGEPLEGEVAETDTPTNAKTQTQRQAQRHLA
YLWLQQRIALATRIDDADMAALAAFEFQQIHIEVVQPSEFDAVVARLQAEPVLGFDTETRASFERGVQHPLSLIQIATAD
ACYLFQHAILGEQFTQLKTVLEDENILKVGVGLRSDAQALKRQWGINVTSKLDLNWALAQLGAEKEMGTRQLVATLLGTR
IDKPKKITLSNWQHVPLSGAQIDYAAADALAALMCFNALITQLTPFYHASSATKAAPLIPSSLVVPLAKYFKDVE

Specific function: Unknown

COG id: COG0349

COG function: function code J; Ribonuclease D

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI110735439, Length=150, Percent_Identity=33.3333333333333, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI301129161, Length=195, Percent_Identity=33.3333333333333, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI301129159, Length=195, Percent_Identity=33.3333333333333, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI301129157, Length=195, Percent_Identity=33.3333333333333, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI301129155, Length=195, Percent_Identity=33.3333333333333, Blast_Score=66, Evalue=3e-11,
Organism=Drosophila melanogaster, GI21356549, Length=159, Percent_Identity=34.5911949685535, Blast_Score=86, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34574; Mature: 34574

Theoretical pI: Translated: 5.67; Mature: 5.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLMKYCISPSKLAWLRKELGKDANGLIAAMDAAGTVYLDKLNASTEALEGEPLEGEVAE
CCHHHHHCCHHHHHHHHHHHCCCCCCEEEEECCCCEEEEEECCCCHHHCCCCCCCCCCCC
TDTPTNAKTQTQRQAQRHLAYLWLQQRIALATRIDDADMAALAAFEFQQIHIEVVQPSEF
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEEEEEEECCCHH
DAVVARLQAEPVLGFDTETRASFERGVQHPLSLIQIATADACYLFQHAILGEQFTQLKTV
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEDENILKVGVGLRSDAQALKRQWGINVTSKLDLNWALAQLGAEKEMGTRQLVATLLGTR
HCCCCEEEECCCCCHHHHHHHHHHCCCCEEEECCHHHHHHHCCHHHHHHHHHHHHHHHHC
IDKPKKITLSNWQHVPLSGAQIDYAAADALAALMCFNALITQLTPFYHASSATKAAPLIP
CCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCC
SSLVVPLAKYFKDVE
HHHHHHHHHHHHCCC
>Mature Secondary Structure
MKLMKYCISPSKLAWLRKELGKDANGLIAAMDAAGTVYLDKLNASTEALEGEPLEGEVAE
CCHHHHHCCHHHHHHHHHHHCCCCCCEEEEECCCCEEEEEECCCCHHHCCCCCCCCCCCC
TDTPTNAKTQTQRQAQRHLAYLWLQQRIALATRIDDADMAALAAFEFQQIHIEVVQPSEF
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEEEEEEECCCHH
DAVVARLQAEPVLGFDTETRASFERGVQHPLSLIQIATADACYLFQHAILGEQFTQLKTV
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEDENILKVGVGLRSDAQALKRQWGINVTSKLDLNWALAQLGAEKEMGTRQLVATLLGTR
HCCCCEEEECCCCCHHHHHHHHHHCCCCEEEECCHHHHHHHCCHHHHHHHHHHHHHHHHC
IDKPKKITLSNWQHVPLSGAQIDYAAADALAALMCFNALITQLTPFYHASSATKAAPLIP
CCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCC
SSLVVPLAKYFKDVE
HHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA