| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is yedI [H]
Identifier: 160876619
GI number: 160876619
Start: 4128925
End: 4129860
Strand: Reverse
Name: yedI [H]
Synonym: Sbal195_3513
Alternate gene names: 160876619
Gene position: 4129860-4128925 (Counterclockwise)
Preceding gene: 160876621
Following gene: 160876618
Centisome position: 77.23
GC content: 50.21
Gene sequence:
>936_bases ATGGCTGGCGCAAGTTTATTAACCTTACTTGACGATATCGCATCGATTTTGGATGACGTAGCGGTAATGAGTAAAGTGGC GGCAAAGAAAACCGCGGGTGTGCTTGGGGATGATTTAGCCCTCAATGCCCAGCAAGTCACAGGCGTGAGTGCCGAGCGTG AATTACCTGTCGTTTGGGCGGTAGCTAAGGGATCGTTTCGTAATAAATGCATTTTAGTGCCCGCAGCCCTGCTGATCAGC GCCTTTATTCCTTGGGCGGTAACACCGTTATTGATGTTTGGTGGACTGTTTTTATGTTACGAAGGGTTCGAAAAACTGCA CCACAGCTATAGCCACAGAAAAGGCCAACCACACAGCGAAACGCAGGAGGAAAGCGAACTTCCAGACATCAAAGATTTAG CCGCTTACGAGGCTGAAAAAGTCAAAGGCGCGATTCGTACCGACTTTGTGTTATCGGCGGAGATTATCGCGATTACCTTA GGCATAGTGGCGGACAAATCCCTGTCGACGCAGTTTTTCACCTTATCCGTTATCGGGATCATCATGACCATAGGTGTGTA TGGTTTAGTGGCCGCGATTGTGAAAATGGACGATGCGGGTTTGTACTTGAGTCAGCGTGAAGGCGAGTCGGCATTAACGC AAATGAACCGCAAACTGGGTTTTGGTTTATTGAGCGCCGCACCTGTGCTGATGAAAAGTTTAACCATTATCGGCACTGCG GCCATGTTTATGGTGGGCGGCGGGATTTTAACCCATGGCTTACACATGATTGGCGAGCAAATCCAGCATGCTGAGCAAGC AGTCGCGGCGATGAGTTTTGTCGGACCTGTGCTTGCCGTGCTGACACCAAGTGTGCTCAATGGCCTATTTGGCGTCGTTG CTGGCGCAGTCGCACTCGCAGTGATGACAGGGATACAAAAACTGCGTGGCGAGTGA
Upstream 100 bases:
>100_bases GCAGTTATGTTGGAAAGCATTTCGCTATACGCCACTAATCTAACTAAGCTACTATGGCAAAAGCAGAATGGTTTATAGAT GATTGGTAGAGGGATTTAGC
Downstream 100 bases:
>100_bases GGTGCGTGCATCGAAAATCGAGGATTAACTCAACAAGGAAGGGCGACGATGAAGTTAATGAAATACTGTATCTCCCCGAG TAAGTTGGCTTGGTTACGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 311; Mature: 310
Protein sequence:
>311_residues MAGASLLTLLDDIASILDDVAVMSKVAAKKTAGVLGDDLALNAQQVTGVSAERELPVVWAVAKGSFRNKCILVPAALLIS AFIPWAVTPLLMFGGLFLCYEGFEKLHHSYSHRKGQPHSETQEESELPDIKDLAAYEAEKVKGAIRTDFVLSAEIIAITL GIVADKSLSTQFFTLSVIGIIMTIGVYGLVAAIVKMDDAGLYLSQREGESALTQMNRKLGFGLLSAAPVLMKSLTIIGTA AMFMVGGGILTHGLHMIGEQIQHAEQAVAAMSFVGPVLAVLTPSVLNGLFGVVAGAVALAVMTGIQKLRGE
Sequences:
>Translated_311_residues MAGASLLTLLDDIASILDDVAVMSKVAAKKTAGVLGDDLALNAQQVTGVSAERELPVVWAVAKGSFRNKCILVPAALLIS AFIPWAVTPLLMFGGLFLCYEGFEKLHHSYSHRKGQPHSETQEESELPDIKDLAAYEAEKVKGAIRTDFVLSAEIIAITL GIVADKSLSTQFFTLSVIGIIMTIGVYGLVAAIVKMDDAGLYLSQREGESALTQMNRKLGFGLLSAAPVLMKSLTIIGTA AMFMVGGGILTHGLHMIGEQIQHAEQAVAAMSFVGPVLAVLTPSVLNGLFGVVAGAVALAVMTGIQKLRGE >Mature_310_residues AGASLLTLLDDIASILDDVAVMSKVAAKKTAGVLGDDLALNAQQVTGVSAERELPVVWAVAKGSFRNKCILVPAALLISA FIPWAVTPLLMFGGLFLCYEGFEKLHHSYSHRKGQPHSETQEESELPDIKDLAAYEAEKVKGAIRTDFVLSAEIIAITLG IVADKSLSTQFFTLSVIGIIMTIGVYGLVAAIVKMDDAGLYLSQREGESALTQMNRKLGFGLLSAAPVLMKSLTIIGTAA MFMVGGGILTHGLHMIGEQIQHAEQAVAAMSFVGPVLAVLTPSVLNGLFGVVAGAVALAVMTGIQKLRGE
Specific function: Unknown
COG id: COG2354
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788268, Length=312, Percent_Identity=55.1282051282051, Blast_Score=323, Evalue=8e-90,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008526 [H]
Pfam domain/function: PF05661 DUF808 [H]
EC number: NA
Molecular weight: Translated: 32721; Mature: 32590
Theoretical pI: Translated: 5.89; Mature: 5.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGASLLTLLDDIASILDDVAVMSKVAAKKTAGVLGDDLALNAQQVTGVSAERELPVVWA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCHHHHCCCCCCCCCCEEEE VAKGSFRNKCILVPAALLISAFIPWAVTPLLMFGGLFLCYEGFEKLHHSYSHRKGQPHSE EECCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC TQEESELPDIKDLAAYEAEKVKGAIRTDFVLSAEIIAITLGIVADKSLSTQFFTLSVIGI CCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH IMTIGVYGLVAAIVKMDDAGLYLSQREGESALTQMNRKLGFGLLSAAPVLMKSLTIIGTA HHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH AMFMVGGGILTHGLHMIGEQIQHAEQAVAAMSFVGPVLAVLTPSVLNGLFGVVAGAVALA HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VMTGIQKLRGE HHHHHHHHCCC >Mature Secondary Structure AGASLLTLLDDIASILDDVAVMSKVAAKKTAGVLGDDLALNAQQVTGVSAERELPVVWA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCHHHHCCCCCCCCCCEEEE VAKGSFRNKCILVPAALLISAFIPWAVTPLLMFGGLFLCYEGFEKLHHSYSHRKGQPHSE EECCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC TQEESELPDIKDLAAYEAEKVKGAIRTDFVLSAEIIAITLGIVADKSLSTQFFTLSVIGI CCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH IMTIGVYGLVAAIVKMDDAGLYLSQREGESALTQMNRKLGFGLLSAAPVLMKSLTIIGTA HHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH AMFMVGGGILTHGLHMIGEQIQHAEQAVAAMSFVGPVLAVLTPSVLNGLFGVVAGAVALA HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VMTGIQKLRGE HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503; 2527357; 7567469 [H]