| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160876617
Identifier: 160876617
GI number: 160876617
Start: 4126784
End: 4127725
Strand: Reverse
Name: 160876617
Synonym: Sbal195_3511
Alternate gene names: NA
Gene position: 4127725-4126784 (Counterclockwise)
Preceding gene: 160876618
Following gene: 160876603
Centisome position: 77.19
GC content: 47.45
Gene sequence:
>942_bases ATGTTAGATGCCATTTGTGAACTCGAAACAGAGGATCATTTAACAGCGAGAACCACTTACAGTGTTTTTAAGTTTCAACA ATTATCCGATGACGATATCGAGCGTTTGCGGCAATGGTTAATTTGCCCTGCGTGCGGCGGTAAAGCGTATTTTCGTAAAG CTTCAAAGGATGGCAAAGCCGCCTGTTTCGGCTCGCGTTATCACCAAGCCGATTGCATTGAATTTAAACCCTCGGCGCAA AAATCTCGCGAGGAGCAAGATGCCATCGAAGTGCATCAGCAGCTGGTGGACGCCGATGCGTTAATGATCGATTTCAGTCG CAAGCCCCGCCGCCATTCTCCCGCAAACAAAGCGCCCACCGCGCCATCTGCAAGTAAGACTGCGCCAACGGCTAAGTCGT CTTCTATATCTGAGTCGTCACCAGTACCTGTTACATCGTCAGCGGATGGTCAAGTGCAAGAGTCGAAAACAGACTATCAA GTTAACACTGCAGCGCGCACAACCGAGAAACGGGTGCCAAGCCAAGGGCTCGAAAAGTTACTGCACAGTTTATTGCGTGG CACAGATTTGGCGAAATCTGATCTCTGGGTATACACAGACACTGAGCGTAAATACCGTTGGCGGGCGAAGAACCTGTTCG TCAACTTTGCCGATGCCGACCCGCTTGATAACAAACCCCACATGTATTGGGGCACTATCTCCCACACTGATCCGACCATG AGCTGGCTTAATCCCGCCGACAGTAAAGATATCGGCATTCCTATCGATGGGATAAAACTGCCATTATTAGCGCAATTTGA AATAGAAGATAAACGCGATCTAGAAGGTGCGGGATTGATTTTATTTGGCAAATGTTTTTGGAATAAAGAAAAGACCCGCA AAATTATTCAGCTGTGGAATAACGATTTGCAGCGGATTTTTATCTCAAAGCTGGAAGATTAG
Upstream 100 bases:
>100_bases CATGTTGATCCTGTTAGCGATGATCACCCTTGGGGTAAATGCCTGGGCTTAGTGATTTTGTGATCATCAGTGCCAACAGG TAAAAATAAAGGAGAACGCT
Downstream 100 bases:
>100_bases CTTTGGGCAGAAACTAGAATTGGGGAGAGAAAAGGGGCTATTCCCGACGTACAAAAACGTCACAGCAAAAGTCCCTATCT ATTTTATTACTCATAACGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 313; Mature: 313
Protein sequence:
>313_residues MLDAICELETEDHLTARTTYSVFKFQQLSDDDIERLRQWLICPACGGKAYFRKASKDGKAACFGSRYHQADCIEFKPSAQ KSREEQDAIEVHQQLVDADALMIDFSRKPRRHSPANKAPTAPSASKTAPTAKSSSISESSPVPVTSSADGQVQESKTDYQ VNTAARTTEKRVPSQGLEKLLHSLLRGTDLAKSDLWVYTDTERKYRWRAKNLFVNFADADPLDNKPHMYWGTISHTDPTM SWLNPADSKDIGIPIDGIKLPLLAQFEIEDKRDLEGAGLILFGKCFWNKEKTRKIIQLWNNDLQRIFISKLED
Sequences:
>Translated_313_residues MLDAICELETEDHLTARTTYSVFKFQQLSDDDIERLRQWLICPACGGKAYFRKASKDGKAACFGSRYHQADCIEFKPSAQ KSREEQDAIEVHQQLVDADALMIDFSRKPRRHSPANKAPTAPSASKTAPTAKSSSISESSPVPVTSSADGQVQESKTDYQ VNTAARTTEKRVPSQGLEKLLHSLLRGTDLAKSDLWVYTDTERKYRWRAKNLFVNFADADPLDNKPHMYWGTISHTDPTM SWLNPADSKDIGIPIDGIKLPLLAQFEIEDKRDLEGAGLILFGKCFWNKEKTRKIIQLWNNDLQRIFISKLED >Mature_313_residues MLDAICELETEDHLTARTTYSVFKFQQLSDDDIERLRQWLICPACGGKAYFRKASKDGKAACFGSRYHQADCIEFKPSAQ KSREEQDAIEVHQQLVDADALMIDFSRKPRRHSPANKAPTAPSASKTAPTAKSSSISESSPVPVTSSADGQVQESKTDYQ VNTAARTTEKRVPSQGLEKLLHSLLRGTDLAKSDLWVYTDTERKYRWRAKNLFVNFADADPLDNKPHMYWGTISHTDPTM SWLNPADSKDIGIPIDGIKLPLLAQFEIEDKRDLEGAGLILFGKCFWNKEKTRKIIQLWNNDLQRIFISKLED
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35412; Mature: 35412
Theoretical pI: Translated: 7.15; Mature: 7.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDAICELETEDHLTARTTYSVFKFQQLSDDDIERLRQWLICPACGGKAYFRKASKDGKA CCCCCCCCCCCCCEEHHHHHHHHHHHHCCHHHHHHHHHHEECCCCCCHHHHHHCCCCCCE ACFGSRYHQADCIEFKPSAQKSREEQDAIEVHQQLVDADALMIDFSRKPRRHSPANKAPT EEECCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCC APSASKTAPTAKSSSISESSPVPVTSSADGQVQESKTDYQVNTAARTTEKRVPSQGLEKL CCCCCCCCCCCCCCCCCCCCCCCEECCCCCCEECCCCCEEEEHHHHHHHHCCCHHHHHHH LHSLLRGTDLAKSDLWVYTDTERKYRWRAKNLFVNFADADPLDNKPHMYWGTISHTDPTM HHHHHCCCCCCCCCEEEEECCCHHHHEEEEEEEEEECCCCCCCCCCCEEEEECCCCCCCH SWLNPADSKDIGIPIDGIKLPLLAQFEIEDKRDLEGAGLILFGKCFWNKEKTRKIIQLWN HHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEHHHCCHHHHHHHHHHHH NDLQRIFISKLED HHHHHHHHHHCCC >Mature Secondary Structure MLDAICELETEDHLTARTTYSVFKFQQLSDDDIERLRQWLICPACGGKAYFRKASKDGKA CCCCCCCCCCCCCEEHHHHHHHHHHHHCCHHHHHHHHHHEECCCCCCHHHHHHCCCCCCE ACFGSRYHQADCIEFKPSAQKSREEQDAIEVHQQLVDADALMIDFSRKPRRHSPANKAPT EEECCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCC APSASKTAPTAKSSSISESSPVPVTSSADGQVQESKTDYQVNTAARTTEKRVPSQGLEKL CCCCCCCCCCCCCCCCCCCCCCCEECCCCCCEECCCCCEEEEHHHHHHHHCCCHHHHHHH LHSLLRGTDLAKSDLWVYTDTERKYRWRAKNLFVNFADADPLDNKPHMYWGTISHTDPTM HHHHHCCCCCCCCCEEEEECCCHHHHEEEEEEEEEECCCCCCCCCCCEEEEECCCCCCCH SWLNPADSKDIGIPIDGIKLPLLAQFEIEDKRDLEGAGLILFGKCFWNKEKTRKIIQLWN HHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEHHHCCHHHHHHHHHHHH NDLQRIFISKLED HHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA