| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is ymfN [C]
Identifier: 160876596
GI number: 160876596
Start: 4111295
End: 4112131
Strand: Reverse
Name: ymfN [C]
Synonym: Sbal195_3490
Alternate gene names: 160876596
Gene position: 4112131-4111295 (Counterclockwise)
Preceding gene: 160876597
Following gene: 160876595
Centisome position: 76.9
GC content: 51.49
Gene sequence:
>837_bases ATGAGTATGGAATTGATGGTAAAAGCGATGAAGGCCAAGGTGGGTAATCCACTGCGCAAGCTGGTGTTGATCAAGCTTGC CGATAACGCCAATGACCAAGGCGAATGCTGGCCGAGTTACCAGAACATTGCAGAGCAGTGTGAGATCACCCGCCGCAGTG TGATGAACCACGTAAAAACGTTGGAGGACGACGGCTTTTTACGGCGCGAATATCGCAAGGGCGAGAAGGGTAACTCCACC AATATTTTCCACATTCGTTTTGAGCCGATGGCGCCAAAATGCAAGGGAAACGCTGCTGTATTAGGGGGTGAAGCAAATTC ACTATCCCCCAATGGCGCAGATTTGCCCCCTAGTGAATGTGGTTCATTACCCCCTAGTGAAGCAAATTCACCCCCTAGTG AATATGGTTCACCAGCTAGTGAACGTGGTTCACCACCCCTAGTGAATCTGGTTCACCCAGAATCTATCAATCTTGAATCT ATCAATGAATCTTTAAAAGACTCTTGTCCAGCAACGAGTGCTAAGTCGGTTTTCAATGCGTTTTTCAAAGCCTATCCAGC CCATCGCAAAGGCGGCTCGGATTCGGCTGCGTGGAAAGCGTGGAAGGCCGAAAAGCTGACCGACGCCGATTGCGTGCTGG CGGTGAGCTGGTTGAAGGAAGCTGCGGCGCTGGATACGAGTTGGGGCTTTAGCGCTAATGGCCAGTTTGTGCTCGGTATT ACCAAGTTTATCCGCGAACGCCACTGGCTAACGCCGTTGCCAAGACCGATGGGTACCGCGGTTGGGCAAGTGGATTGGAG TTACGCGGTGTATGACCCAGAGGACCCCTTGATATGA
Upstream 100 bases:
>100_bases GGCTTAATACCTATAACCTAAAGTGAGGCAATATCATGTTACTGAAGCATGGGGTTTGCGTCAATTCGAGTTTGTGGGTT GCTCCGTTTGGGGGTGACTT
Downstream 100 bases:
>100_bases CGGCCAACCAAAATGCGAGCATGAAATCACTGCAGACCTTAATCCGCCAGCCGTTGGTTGGGCAGGGGCGTGTTAGCCAA CCTGAGCCCACGGCAATGGA
Product: hypothetical protein
Products: NA
Alternate protein names: Phage Replication Protein; Transcriptional Regulator; Replication Of DNA; Replication Protein Phage; Bacteriophage Replication Protein
Number of amino acids: Translated: 278; Mature: 277
Protein sequence:
>278_residues MSMELMVKAMKAKVGNPLRKLVLIKLADNANDQGECWPSYQNIAEQCEITRRSVMNHVKTLEDDGFLRREYRKGEKGNST NIFHIRFEPMAPKCKGNAAVLGGEANSLSPNGADLPPSECGSLPPSEANSPPSEYGSPASERGSPPLVNLVHPESINLES INESLKDSCPATSAKSVFNAFFKAYPAHRKGGSDSAAWKAWKAEKLTDADCVLAVSWLKEAAALDTSWGFSANGQFVLGI TKFIRERHWLTPLPRPMGTAVGQVDWSYAVYDPEDPLI
Sequences:
>Translated_278_residues MSMELMVKAMKAKVGNPLRKLVLIKLADNANDQGECWPSYQNIAEQCEITRRSVMNHVKTLEDDGFLRREYRKGEKGNST NIFHIRFEPMAPKCKGNAAVLGGEANSLSPNGADLPPSECGSLPPSEANSPPSEYGSPASERGSPPLVNLVHPESINLES INESLKDSCPATSAKSVFNAFFKAYPAHRKGGSDSAAWKAWKAEKLTDADCVLAVSWLKEAAALDTSWGFSANGQFVLGI TKFIRERHWLTPLPRPMGTAVGQVDWSYAVYDPEDPLI >Mature_277_residues SMELMVKAMKAKVGNPLRKLVLIKLADNANDQGECWPSYQNIAEQCEITRRSVMNHVKTLEDDGFLRREYRKGEKGNSTN IFHIRFEPMAPKCKGNAAVLGGEANSLSPNGADLPPSECGSLPPSEANSPPSEYGSPASERGSPPLVNLVHPESINLESI NESLKDSCPATSAKSVFNAFFKAYPAHRKGGSDSAAWKAWKAEKLTDADCVLAVSWLKEAAALDTSWGFSANGQFVLGIT KFIRERHWLTPLPRPMGTAVGQVDWSYAVYDPEDPLI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30380; Mature: 30248
Theoretical pI: Translated: 6.67; Mature: 6.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMELMVKAMKAKVGNPLRKLVLIKLADNANDQGECWPSYQNIAEQCEITRRSVMNHVKT CCHHHHHHHHHHHHCCHHHHEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH LEDDGFLRREYRKGEKGNSTNIFHIRFEPMAPKCKGNAAVLGGEANSLSPNGADLPPSEC CCCCCHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHH GSLPPSEANSPPSEYGSPASERGSPPLVNLVHPESINLESINESLKDSCPATSAKSVFNA CCCCCCCCCCCCHHHCCCCHHCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHH FFKAYPAHRKGGSDSAAWKAWKAEKLTDADCVLAVSWLKEAAALDTSWGFSANGQFVLGI HHHHCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEHH TKFIRERHWLTPLPRPMGTAVGQVDWSYAVYDPEDPLI HHHHHHHCCCCCCCCHHHHHHCCCCCEEEEECCCCCCC >Mature Secondary Structure SMELMVKAMKAKVGNPLRKLVLIKLADNANDQGECWPSYQNIAEQCEITRRSVMNHVKT CHHHHHHHHHHHHCCHHHHEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH LEDDGFLRREYRKGEKGNSTNIFHIRFEPMAPKCKGNAAVLGGEANSLSPNGADLPPSEC CCCCCHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHH GSLPPSEANSPPSEYGSPASERGSPPLVNLVHPESINLESINESLKDSCPATSAKSVFNA CCCCCCCCCCCCHHHCCCCHHCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHH FFKAYPAHRKGGSDSAAWKAWKAEKLTDADCVLAVSWLKEAAALDTSWGFSANGQFVLGI HHHHCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEHH TKFIRERHWLTPLPRPMGTAVGQVDWSYAVYDPEDPLI HHHHHHHCCCCCCCCHHHHHHCCCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA