| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160876595
Identifier: 160876595
GI number: 160876595
Start: 4110615
End: 4111298
Strand: Reverse
Name: 160876595
Synonym: Sbal195_3489
Alternate gene names: NA
Gene position: 4111298-4110615 (Counterclockwise)
Preceding gene: 160876596
Following gene: 160876594
Centisome position: 76.89
GC content: 55.56
Gene sequence:
>684_bases ATGACGGCCAACCAAAATGCGAGCATGAAATCACTGCAGACCTTAATCCGCCAGCCGTTGGTTGGGCAGGGGCGTGTTAG CCAACCTGAGCCCACGGCAATGGACATGGCGATTGTGGACAGCGTGTTTAGCAAGTTGCGGGTGTTGTTTCCGGTGAGTG CACCGCGGCCTGAGGACGAAGCGACCCACAAAGCCGAGTGGCTTAAAACCTTGGCGGCGCAGGGCATTGCCAGCCGCGAG CAAGTGCAAGCGGGGCTGAATCGCGCCAGACGCGAGCAGGGCGATAGGCAGTTTTGGCCGACACCGCGCCAGTTTGCTTT GTGGTGCCAACCCACGGCCTGTGATTTAGGGCTGCCCAAGTTAGAGGCGGCGTTTAAGGAAGCAACGCGCCATTACCATC ACCCTGATAAGCATACGTGGAGCCATGATGTGGTGCGCTTAGCGGTGCGTGAAACAGGCAGCTGGATGTTTGCTACTGGG CTCGAAAAGGATGTGTTAATGACCTTCGAGCGTAATTACAAAGTCTTATGCAGACGCTTTAGCCGTGGCGAGTTGACCGA TATTGAATTGCCTAAAGCACTACCTGAAACGGTGACGCGGCCCACTGAGGCGGCAAAGGCGAAATCGATTATTGCCAATT TACGAACCAACCTTGGGCTTAAGGGGGCAAACGATGGCGAATAA
Upstream 100 bases:
>100_bases GCGAACGCCACTGGCTAACGCCGTTGCCAAGACCGATGGGTACCGCGGTTGGGCAAGTGGATTGGAGTTACGCGGTGTAT GACCCAGAGGACCCCTTGAT
Downstream 100 bases:
>100_bases ACCACTGACACAGCGCGAACGCTTAATGCGCATCATCACCGGCAAACGGTTTTGGACCCTGTTTGAAATCCAGCAAGAAA GCTTTAACCGCTTTGGGGTT
Product: replication P family protein
Products: NA
Alternate protein names: DNA Replication Protein; Replication P; Replication Protein P Of Bacteriophage
Number of amino acids: Translated: 227; Mature: 226
Protein sequence:
>227_residues MTANQNASMKSLQTLIRQPLVGQGRVSQPEPTAMDMAIVDSVFSKLRVLFPVSAPRPEDEATHKAEWLKTLAAQGIASRE QVQAGLNRARREQGDRQFWPTPRQFALWCQPTACDLGLPKLEAAFKEATRHYHHPDKHTWSHDVVRLAVRETGSWMFATG LEKDVLMTFERNYKVLCRRFSRGELTDIELPKALPETVTRPTEAAKAKSIIANLRTNLGLKGANDGE
Sequences:
>Translated_227_residues MTANQNASMKSLQTLIRQPLVGQGRVSQPEPTAMDMAIVDSVFSKLRVLFPVSAPRPEDEATHKAEWLKTLAAQGIASRE QVQAGLNRARREQGDRQFWPTPRQFALWCQPTACDLGLPKLEAAFKEATRHYHHPDKHTWSHDVVRLAVRETGSWMFATG LEKDVLMTFERNYKVLCRRFSRGELTDIELPKALPETVTRPTEAAKAKSIIANLRTNLGLKGANDGE >Mature_226_residues TANQNASMKSLQTLIRQPLVGQGRVSQPEPTAMDMAIVDSVFSKLRVLFPVSAPRPEDEATHKAEWLKTLAAQGIASREQ VQAGLNRARREQGDRQFWPTPRQFALWCQPTACDLGLPKLEAAFKEATRHYHHPDKHTWSHDVVRLAVRETGSWMFATGL EKDVLMTFERNYKVLCRRFSRGELTDIELPKALPETVTRPTEAAKAKSIIANLRTNLGLKGANDGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25514; Mature: 25383
Theoretical pI: Translated: 9.88; Mature: 9.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTANQNASMKSLQTLIRQPLVGQGRVSQPEPTAMDMAIVDSVFSKLRVLFPVSAPRPEDE CCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCH ATHKAEWLKTLAAQGIASREQVQAGLNRARREQGDRQFWPTPRQFALWCQPTACDLGLPK HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCHH LEAAFKEATRHYHHPDKHTWSHDVVRLAVRETGSWMFATGLEKDVLMTFERNYKVLCRRF HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHH SRGELTDIELPKALPETVTRPTEAAKAKSIIANLRTNLGLKGANDGE CCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure TANQNASMKSLQTLIRQPLVGQGRVSQPEPTAMDMAIVDSVFSKLRVLFPVSAPRPEDE CCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCH ATHKAEWLKTLAAQGIASREQVQAGLNRARREQGDRQFWPTPRQFALWCQPTACDLGLPK HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCHH LEAAFKEATRHYHHPDKHTWSHDVVRLAVRETGSWMFATGLEKDVLMTFERNYKVLCRRF HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHH SRGELTDIELPKALPETVTRPTEAAKAKSIIANLRTNLGLKGANDGE CCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA