Definition Shewanella baltica OS195 chromosome, complete genome.
Accession NC_009997
Length 5,347,283

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The map label for this gene is 160876584

Identifier: 160876584

GI number: 160876584

Start: 4100606

End: 4100953

Strand: Direct

Name: 160876584

Synonym: Sbal195_3478

Alternate gene names: NA

Gene position: 4100606-4100953 (Clockwise)

Preceding gene: 160876582

Following gene: 160876585

Centisome position: 76.69

GC content: 41.09

Gene sequence:

>348_bases
ATGAAGCATCTCAGCGAATTAGCCACAGAACTCAAGCACTACCGAGAACAACTAGCACTAAGTCAGAAAGACATGCTGCT
AAACATAGGTATGTCACAGCAACAATACCAACGAATAGAAAGTGGCAGTGATACTCGCTTATCGACATTACTGAGAGTCT
TGGAAGGATTAAATCTTGAAATGATGATCGTTCCTAAACAGCACATCAGTGCAGTAAAAGCCCTCATTAACCAAACAACT
TCAGAACCAGAAATTGACCGTCATTCGCCTAACCACTTAACGGCAGAGACGGGCACATCTTGGGAAAAGGTCTTACATTC
AGTTGATGATAAAGAAGAAAATCTATGA

Upstream 100 bases:

>100_bases
ATTGATTGTATTAACACAAAATAACATCGTATTAGTTGTAATTAATGGCAAATAACAACTAATATGATGTTTATGAGTAA
AAGATAACCGAGCCAACACC

Downstream 100 bases:

>100_bases
AACCTGCTGAATCAGTAGAGGCTCTCGCGCTTTATTTAAATCATCAACGGATTGCGATACTCACCCATTATTCAGGTGGT
AAAAACATTCTGAAATTTGA

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; Plasmid-Related Protein; Transcriptional Regulator XRE Family

Number of amino acids: Translated: 115; Mature: 115

Protein sequence:

>115_residues
MKHLSELATELKHYREQLALSQKDMLLNIGMSQQQYQRIESGSDTRLSTLLRVLEGLNLEMMIVPKQHISAVKALINQTT
SEPEIDRHSPNHLTAETGTSWEKVLHSVDDKEENL

Sequences:

>Translated_115_residues
MKHLSELATELKHYREQLALSQKDMLLNIGMSQQQYQRIESGSDTRLSTLLRVLEGLNLEMMIVPKQHISAVKALINQTT
SEPEIDRHSPNHLTAETGTSWEKVLHSVDDKEENL
>Mature_115_residues
MKHLSELATELKHYREQLALSQKDMLLNIGMSQQQYQRIESGSDTRLSTLLRVLEGLNLEMMIVPKQHISAVKALINQTT
SEPEIDRHSPNHLTAETGTSWEKVLHSVDDKEENL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13148; Mature: 13148

Theoretical pI: Translated: 5.91; Mature: 5.91

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHLSELATELKHYREQLALSQKDMLLNIGMSQQQYQRIESGSDTRLSTLLRVLEGLNLE
CCHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCE
MMIVPKQHISAVKALINQTTSEPEIDRHSPNHLTAETGTSWEKVLHSVDDKEENL
EEEECHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKHLSELATELKHYREQLALSQKDMLLNIGMSQQQYQRIESGSDTRLSTLLRVLEGLNLE
CCHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCE
MMIVPKQHISAVKALINQTTSEPEIDRHSPNHLTAETGTSWEKVLHSVDDKEENL
EEEECHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA