| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160876584
Identifier: 160876584
GI number: 160876584
Start: 4100606
End: 4100953
Strand: Direct
Name: 160876584
Synonym: Sbal195_3478
Alternate gene names: NA
Gene position: 4100606-4100953 (Clockwise)
Preceding gene: 160876582
Following gene: 160876585
Centisome position: 76.69
GC content: 41.09
Gene sequence:
>348_bases ATGAAGCATCTCAGCGAATTAGCCACAGAACTCAAGCACTACCGAGAACAACTAGCACTAAGTCAGAAAGACATGCTGCT AAACATAGGTATGTCACAGCAACAATACCAACGAATAGAAAGTGGCAGTGATACTCGCTTATCGACATTACTGAGAGTCT TGGAAGGATTAAATCTTGAAATGATGATCGTTCCTAAACAGCACATCAGTGCAGTAAAAGCCCTCATTAACCAAACAACT TCAGAACCAGAAATTGACCGTCATTCGCCTAACCACTTAACGGCAGAGACGGGCACATCTTGGGAAAAGGTCTTACATTC AGTTGATGATAAAGAAGAAAATCTATGA
Upstream 100 bases:
>100_bases ATTGATTGTATTAACACAAAATAACATCGTATTAGTTGTAATTAATGGCAAATAACAACTAATATGATGTTTATGAGTAA AAGATAACCGAGCCAACACC
Downstream 100 bases:
>100_bases AACCTGCTGAATCAGTAGAGGCTCTCGCGCTTTATTTAAATCATCAACGGATTGCGATACTCACCCATTATTCAGGTGGT AAAAACATTCTGAAATTTGA
Product: XRE family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; Plasmid-Related Protein; Transcriptional Regulator XRE Family
Number of amino acids: Translated: 115; Mature: 115
Protein sequence:
>115_residues MKHLSELATELKHYREQLALSQKDMLLNIGMSQQQYQRIESGSDTRLSTLLRVLEGLNLEMMIVPKQHISAVKALINQTT SEPEIDRHSPNHLTAETGTSWEKVLHSVDDKEENL
Sequences:
>Translated_115_residues MKHLSELATELKHYREQLALSQKDMLLNIGMSQQQYQRIESGSDTRLSTLLRVLEGLNLEMMIVPKQHISAVKALINQTT SEPEIDRHSPNHLTAETGTSWEKVLHSVDDKEENL >Mature_115_residues MKHLSELATELKHYREQLALSQKDMLLNIGMSQQQYQRIESGSDTRLSTLLRVLEGLNLEMMIVPKQHISAVKALINQTT SEPEIDRHSPNHLTAETGTSWEKVLHSVDDKEENL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13148; Mature: 13148
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHLSELATELKHYREQLALSQKDMLLNIGMSQQQYQRIESGSDTRLSTLLRVLEGLNLE CCHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCE MMIVPKQHISAVKALINQTTSEPEIDRHSPNHLTAETGTSWEKVLHSVDDKEENL EEEECHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCC >Mature Secondary Structure MKHLSELATELKHYREQLALSQKDMLLNIGMSQQQYQRIESGSDTRLSTLLRVLEGLNLE CCHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCE MMIVPKQHISAVKALINQTTSEPEIDRHSPNHLTAETGTSWEKVLHSVDDKEENL EEEECHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA