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The map label for this gene is intZ [H]

Identifier: 160876516

GI number: 160876516

Start: 4023525

End: 4024730

Strand: Reverse

Name: intZ [H]

Synonym: Sbal195_3410

Alternate gene names: 160876516

Gene position: 4024730-4023525 (Counterclockwise)

Preceding gene: 160876517

Following gene: 160876504

Centisome position: 75.27

GC content: 41.54

Gene sequence:

>1206_bases
ATGTCCTTATCTGACACATGGTTAAAGGCTAATTTATCTAAAAGTTACCCCAAGTCTTTTGAACGTGCAGACCGTGATGG
CCTGAGTGTTAGGGTGTCTCCGAAAGGTAAGATTACTTTCCAAATCAGATACCGCTATGTTGGCAAAGCCTGCCGAGTTG
ACTTAGGCTCTTACCCACTTATGTCACTTAAGGATGCAAGAACTGAATGCGTTAGATTGCGTGCAGAGCTTGAGCAAGGA
AATAACCCGAAGACCGTAAAGGAACTTGAGCACAAAGCCGTTTCTACAGCGCTAACAATGTCTGAGTTGTTCATGCAGTG
GTATGAGAGTTATTGTGTGGCTAATAAAACCAGTCACGCTGAAATTTTAAGATCCTTCAAATTACACGTTCTGCCAAAGA
TAGGTCACTTGCCTGCTGATAAAGTCTCGCTACATATTTGGCTTGATGTTATCGAGACCAAAGCAAAAACCTCACCTTCA
ATTGCCGATAGATTACTCACAAATGGAAAGCAATTACTCAAGTGGGGCGTCAAGCGGCAATTACTTAAGTCAAACGTATT
GGTTGATATCAGCGCCAAGAGCGACCTACAAATAACTAAGAATGTGGGTGTTCGCTCACTTAACAATGATGAAATTCGGT
TGTTTTGGTTAGCGATAGAAGGATCCAGAATTGCACAAAAAAATAAAATCTTTCTCAAGCTCAATCTTATCTATGGCTGC
CGTAATGGTGAATTGAGGCTAAGCAAAAAATCAGATTTTGACTTCAACACTATGGTGTGGACTGTACCACCTGAAAATCA
TAAAACAGGTAAGGTAACTAAAAAACCATTGCTAAGGCCAATCATTCCAGAGACAAAGGAGTTGATTGAAGAAGCCGTAC
TTTTGAGTGGTGACGGTGAGTTTTTATTTAATAATGAAGGCACAGATCAACCAATGGGGCGTTCTTCATCGCTTTCTCTG
CCATACAACATTATCCAATGGCTTAAGAAGAACATGAGCTATGAAATGGAACACTGGTCAATACACGATTTGCGTAAAAC
GGCTCGGACAAACTTTTCAACTTTAACCGAGCCGCATGTCGCCGAGATCATGTTGGGCCATAAACTGCCAGGGCAATGGC
AAGTTTATGACCACTATGAATATCTAGAAGAACAAGCTAACGCATATAGCGGATGGGTAGAAAGACTACGTAAAATCACG
GCCTAG

Upstream 100 bases:

>100_bases
GTCCTTCCTTCTCTATAGACACCAAAAACTTGTACAAATTTGCGTACAAATTTAGACTGTACACACTCGGTTTAAAAACT
TTGTACACAGTGAGTTTAAA

Downstream 100 bases:

>100_bases
CATTAGGCTGCATGCTGTGATGTATCGATTCCGGCTGCTTCCCATTCCTCTACATCATCAATTGCCCATCGGTTATAACT
CCCAATGGCTAATATTCTGG

Product: integrase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 401; Mature: 400

Protein sequence:

>401_residues
MSLSDTWLKANLSKSYPKSFERADRDGLSVRVSPKGKITFQIRYRYVGKACRVDLGSYPLMSLKDARTECVRLRAELEQG
NNPKTVKELEHKAVSTALTMSELFMQWYESYCVANKTSHAEILRSFKLHVLPKIGHLPADKVSLHIWLDVIETKAKTSPS
IADRLLTNGKQLLKWGVKRQLLKSNVLVDISAKSDLQITKNVGVRSLNNDEIRLFWLAIEGSRIAQKNKIFLKLNLIYGC
RNGELRLSKKSDFDFNTMVWTVPPENHKTGKVTKKPLLRPIIPETKELIEEAVLLSGDGEFLFNNEGTDQPMGRSSSLSL
PYNIIQWLKKNMSYEMEHWSIHDLRKTARTNFSTLTEPHVAEIMLGHKLPGQWQVYDHYEYLEEQANAYSGWVERLRKIT
A

Sequences:

>Translated_401_residues
MSLSDTWLKANLSKSYPKSFERADRDGLSVRVSPKGKITFQIRYRYVGKACRVDLGSYPLMSLKDARTECVRLRAELEQG
NNPKTVKELEHKAVSTALTMSELFMQWYESYCVANKTSHAEILRSFKLHVLPKIGHLPADKVSLHIWLDVIETKAKTSPS
IADRLLTNGKQLLKWGVKRQLLKSNVLVDISAKSDLQITKNVGVRSLNNDEIRLFWLAIEGSRIAQKNKIFLKLNLIYGC
RNGELRLSKKSDFDFNTMVWTVPPENHKTGKVTKKPLLRPIIPETKELIEEAVLLSGDGEFLFNNEGTDQPMGRSSSLSL
PYNIIQWLKKNMSYEMEHWSIHDLRKTARTNFSTLTEPHVAEIMLGHKLPGQWQVYDHYEYLEEQANAYSGWVERLRKIT
A
>Mature_400_residues
SLSDTWLKANLSKSYPKSFERADRDGLSVRVSPKGKITFQIRYRYVGKACRVDLGSYPLMSLKDARTECVRLRAELEQGN
NPKTVKELEHKAVSTALTMSELFMQWYESYCVANKTSHAEILRSFKLHVLPKIGHLPADKVSLHIWLDVIETKAKTSPSI
ADRLLTNGKQLLKWGVKRQLLKSNVLVDISAKSDLQITKNVGVRSLNNDEIRLFWLAIEGSRIAQKNKIFLKLNLIYGCR
NGELRLSKKSDFDFNTMVWTVPPENHKTGKVTKKPLLRPIIPETKELIEEAVLLSGDGEFLFNNEGTDQPMGRSSSLSLP
YNIIQWLKKNMSYEMEHWSIHDLRKTARTNFSTLTEPHVAEIMLGHKLPGQWQVYDHYEYLEEQANAYSGWVERLRKITA

Specific function: Integrase is necessary for integration of the phage into the host genome by site-specific recombination. In conjunction with excisionase, integrase is also necessary for excision of the prophage from the host genome [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family [H]

Homologues:

Organism=Escherichia coli, GI145693166, Length=380, Percent_Identity=23.9473684210526, Blast_Score=83, Evalue=3e-17,
Organism=Escherichia coli, GI1788690, Length=397, Percent_Identity=23.9294710327456, Blast_Score=71, Evalue=1e-13,
Organism=Escherichia coli, GI1788974, Length=324, Percent_Identity=22.8395061728395, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR023109 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 46049; Mature: 45918

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLSDTWLKANLSKSYPKSFERADRDGLSVRVSPKGKITFQIRYRYVGKACRVDLGSYPL
CCCCCCHHCCCCCCCCCHHHHHCCCCCCEEEECCCCEEEEEEEEEECCCHHEECCCCCCC
MSLKDARTECVRLRAELEQGNNPKTVKELEHKAVSTALTMSELFMQWYESYCVANKTSHA
CHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
EILRSFKLHVLPKIGHLPADKVSLHIWLDVIETKAKTSPSIADRLLTNGKQLLKWGVKRQ
HHHHHHHHHCCCCCCCCCCCCEEEEEEEEEHHHHCCCCHHHHHHHHHCCHHHHHHHHHHH
LLKSNVLVDISAKSDLQITKNVGVRSLNNDEIRLFWLAIEGSRIAQKNKIFLKLNLIYGC
HHHCCCEEEEECCCCCEEECCCCCCCCCCCCEEEEEEEECCCEECCCCEEEEEEEEEEEC
RNGELRLSKKSDFDFNTMVWTVPPENHKTGKVTKKPLLRPIIPETKELIEEAVLLSGDGE
CCCCEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHEECCCCC
FLFNNEGTDQPMGRSSSLSLPYNIIQWLKKNMSYEMEHWSIHDLRKTARTNFSTLTEPHV
EEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHCCCCHH
AEIMLGHKLPGQWQVYDHYEYLEEQANAYSGWVERLRKITA
HHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SLSDTWLKANLSKSYPKSFERADRDGLSVRVSPKGKITFQIRYRYVGKACRVDLGSYPL
CCCCCHHCCCCCCCCCHHHHHCCCCCCEEEECCCCEEEEEEEEEECCCHHEECCCCCCC
MSLKDARTECVRLRAELEQGNNPKTVKELEHKAVSTALTMSELFMQWYESYCVANKTSHA
CHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
EILRSFKLHVLPKIGHLPADKVSLHIWLDVIETKAKTSPSIADRLLTNGKQLLKWGVKRQ
HHHHHHHHHCCCCCCCCCCCCEEEEEEEEEHHHHCCCCHHHHHHHHHCCHHHHHHHHHHH
LLKSNVLVDISAKSDLQITKNVGVRSLNNDEIRLFWLAIEGSRIAQKNKIFLKLNLIYGC
HHHCCCEEEEECCCCCEEECCCCCCCCCCCCEEEEEEEECCCEECCCCEEEEEEEEEEEC
RNGELRLSKKSDFDFNTMVWTVPPENHKTGKVTKKPLLRPIIPETKELIEEAVLLSGDGE
CCCCEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHEECCCCC
FLFNNEGTDQPMGRSSSLSLPYNIIQWLKKNMSYEMEHWSIHDLRKTARTNFSTLTEPHV
EEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHCCCCHH
AEIMLGHKLPGQWQVYDHYEYLEEQANAYSGWVERLRKITA
HHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]