| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160876504
Identifier: 160876504
GI number: 160876504
Start: 4017174
End: 4017464
Strand: Reverse
Name: 160876504
Synonym: Sbal195_3398
Alternate gene names: NA
Gene position: 4017464-4017174 (Counterclockwise)
Preceding gene: 160876516
Following gene: 160876503
Centisome position: 75.13
GC content: 39.52
Gene sequence:
>291_bases ATGACAAACATCAAAAAAATACTGAAAGCCATTAATAGGTCTCAGGATGATTTGGCTAGCGAGGTTGGGATCTCACAAGG TTCTGTTAACCACTATGCCAATGGAAATAGAAAACCTAGCTATGACATGGCTTGGAAAGTAGTAAACGCTCTCAATCGCT TAGGTTCCTCATGTTCATTTTCTGATGTTTTTCCTGATCCGTTGGAATGTGATCCACATGCTGTAAATCAATTAAACGAT AAACAGGATAACTCAGTTTTAGATATCCCTAAGTCGGCGAGTGTGGCTTAG
Upstream 100 bases:
>100_bases ACCTATTGTAATTGATTTCAGAATATCCATTTTGTAATAAGTGTTTGCTGTTTAATATTTCATTGTGTAATATCCGTGTT AAAGGCAAAACGGAGTCGAT
Downstream 100 bases:
>100_bases GTTCACTGTAGGTTGAAGGAGGTAAGTACACATGAAAACCAATTCACGTAAAAAAGATAGCCGTTTGAATTTGTTGATGA AAACGATTCATCGGGTGTTG
Product: XRE family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 96; Mature: 95
Protein sequence:
>96_residues MTNIKKILKAINRSQDDLASEVGISQGSVNHYANGNRKPSYDMAWKVVNALNRLGSSCSFSDVFPDPLECDPHAVNQLND KQDNSVLDIPKSASVA
Sequences:
>Translated_96_residues MTNIKKILKAINRSQDDLASEVGISQGSVNHYANGNRKPSYDMAWKVVNALNRLGSSCSFSDVFPDPLECDPHAVNQLND KQDNSVLDIPKSASVA >Mature_95_residues TNIKKILKAINRSQDDLASEVGISQGSVNHYANGNRKPSYDMAWKVVNALNRLGSSCSFSDVFPDPLECDPHAVNQLNDK QDNSVLDIPKSASVA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10461; Mature: 10330
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNIKKILKAINRSQDDLASEVGISQGSVNHYANGNRKPSYDMAWKVVNALNRLGSSCSF CCCHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC SDVFPDPLECDPHAVNQLNDKQDNSVLDIPKSASVA CCCCCCCCCCCCHHHHHCCCCCCCCEECCCCCCCCC >Mature Secondary Structure TNIKKILKAINRSQDDLASEVGISQGSVNHYANGNRKPSYDMAWKVVNALNRLGSSCSF CCHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC SDVFPDPLECDPHAVNQLNDKQDNSVLDIPKSASVA CCCCCCCCCCCCHHHHHCCCCCCCCEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA