| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
Click here to switch to the map view.
The map label for this gene is 160876509
Identifier: 160876509
GI number: 160876509
Start: 4020391
End: 4021455
Strand: Direct
Name: 160876509
Synonym: Sbal195_3403
Alternate gene names: NA
Gene position: 4020391-4021455 (Clockwise)
Preceding gene: 160876508
Following gene: 160876510
Centisome position: 75.19
GC content: 50.33
Gene sequence:
>1065_bases ATGATGGATATGTGTTACTCAATGCCCGCGGTGATGGGCGTACAAGGTGGCAAAGTGTTTTACACCGTTATCATGTCGAT GCGTGTGCTGGTTCGTATGTTACGCATTGACGATGCCGGCAGTGTGCTCGACCGCAGCCAACGCAAAGTTAACCCTGCCC GTGCTAAATCCATTGGCAATTACATGGTGGCGAATCCAACGGGGTATTTTCTGCCAGGCATTATCGGCGTGGTTGAAGTA CCCACTGGTGGTGATGCGCCAAAGTTCGAAGCGTCCGAAATCAGCGGCGTGGTCGGCGTATTAAAAGTTGGCCTTGATTC GATTATCAAGTTGTTCGATGGCCAGCACCGCGCCACAGGTATCGCAAAGGCACTGGAAACATCACCTGAGATTGCACAAG ACTCAATCTCTATCACCCTATACATGAATTTATCGCTGCAAGAACGCCAGCAAGCGTTTACCGATATCAACCAAAATGCC AGCAAACCGCCTCAAGGTTTGTCAGATACCTACAACCATAGGGATGAGCTATCAAAGCTCACCATGGATTTAGTGAAACA AATCGACTGGATGCAAGGCCGTGTTGATTTTGCGACAAACAAACCGACTGCACAGAGCGAATTTTATTGGTCCTTTAAAC AAATTAAAGACGCCACGGCCATCATGCTGGGTACCAAGAAAAACTTTGAGCCCTTCCACGCCACCCTTGCCTATGACTTT TGGAACACCATGGGCGCAGCAATGGAGTTCCAATCCCTTGGCAGTAAAGAGCGCGAAACCAGTTTATTTACCACCACGGT AATGCTTAAAGCGCTGGCGAGCGCCGCAAGCGAGGCTGAATCCATCGGCCAACGCCACTGGCGCCATGCTTACCAAAACC TCGTTTGGAGTCGCAACAGCCAAGACTTTACAGGCCGCTGCATTTGCCCCAAAACAGGCAAGTTACTCGCGAACGCCGAT GCCGTAACGCTGACATCAAACCTCATTCTTAAAACGATGCAGCAAAAGCTCGACCCCGTTCGCGCCAGCGTTGAAAGAAC GTTTTTCCCAGAGGTGGCAGCATGA
Upstream 100 bases:
>100_bases GCTGGAAAGACCCTTTCACCTATCGCTTTATCTGGTGCTGTTACGCAATTGTGTTTGCCATCCGCCAATACGATGAAGCG ACCCAAAGCAAGGAGGCAGC
Downstream 100 bases:
>100_bases ACCACTTACTCCCGGGCTTTGAATCACAAGAGCGCGTTGCGTTATTGCTGTCGCTTACCCGCATTAGTTCGCCCGAGGTG ATTGCCGCGTTAACGCTGCA
Product: hypothetical protein
Products: NA
Alternate protein names: Bacteriophage Protein; Thiol Protease Domain-Containing Protein; DGQHR Domain Protein; DNA Thiolation Protein; DGQHR Domain-Containing Protein
Number of amino acids: Translated: 354; Mature: 354
Protein sequence:
>354_residues MMDMCYSMPAVMGVQGGKVFYTVIMSMRVLVRMLRIDDAGSVLDRSQRKVNPARAKSIGNYMVANPTGYFLPGIIGVVEV PTGGDAPKFEASEISGVVGVLKVGLDSIIKLFDGQHRATGIAKALETSPEIAQDSISITLYMNLSLQERQQAFTDINQNA SKPPQGLSDTYNHRDELSKLTMDLVKQIDWMQGRVDFATNKPTAQSEFYWSFKQIKDATAIMLGTKKNFEPFHATLAYDF WNTMGAAMEFQSLGSKERETSLFTTTVMLKALASAASEAESIGQRHWRHAYQNLVWSRNSQDFTGRCICPKTGKLLANAD AVTLTSNLILKTMQQKLDPVRASVERTFFPEVAA
Sequences:
>Translated_354_residues MMDMCYSMPAVMGVQGGKVFYTVIMSMRVLVRMLRIDDAGSVLDRSQRKVNPARAKSIGNYMVANPTGYFLPGIIGVVEV PTGGDAPKFEASEISGVVGVLKVGLDSIIKLFDGQHRATGIAKALETSPEIAQDSISITLYMNLSLQERQQAFTDINQNA SKPPQGLSDTYNHRDELSKLTMDLVKQIDWMQGRVDFATNKPTAQSEFYWSFKQIKDATAIMLGTKKNFEPFHATLAYDF WNTMGAAMEFQSLGSKERETSLFTTTVMLKALASAASEAESIGQRHWRHAYQNLVWSRNSQDFTGRCICPKTGKLLANAD AVTLTSNLILKTMQQKLDPVRASVERTFFPEVAA >Mature_354_residues MMDMCYSMPAVMGVQGGKVFYTVIMSMRVLVRMLRIDDAGSVLDRSQRKVNPARAKSIGNYMVANPTGYFLPGIIGVVEV PTGGDAPKFEASEISGVVGVLKVGLDSIIKLFDGQHRATGIAKALETSPEIAQDSISITLYMNLSLQERQQAFTDINQNA SKPPQGLSDTYNHRDELSKLTMDLVKQIDWMQGRVDFATNKPTAQSEFYWSFKQIKDATAIMLGTKKNFEPFHATLAYDF WNTMGAAMEFQSLGSKERETSLFTTTVMLKALASAASEAESIGQRHWRHAYQNLVWSRNSQDFTGRCICPKTGKLLANAD AVTLTSNLILKTMQQKLDPVRASVERTFFPEVAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39224; Mature: 39224
Theoretical pI: Translated: 8.74; Mature: 8.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMDMCYSMPAVMGVQGGKVFYTVIMSMRVLVRMLRIDDAGSVLDRSQRKVNPARAKSIGN CCCHHHHCHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHCCC YMVANPTGYFLPGIIGVVEVPTGGDAPKFEASEISGVVGVLKVGLDSIIKLFDGQHRATG EEEECCCCCHHCCHHEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH IAKALETSPEIAQDSISITLYMNLSLQERQQAFTDINQNASKPPQGLSDTYNHRDELSKL HHHHHHCCCHHHHCCEEEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH TMDLVKQIDWMQGRVDFATNKPTAQSEFYWSFKQIKDATAIMLGTKKNFEPFHATLAYDF HHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHCCHHEEEEECCCCCCHHHHHHHHHH WNTMGAAMEFQSLGSKERETSLFTTTVMLKALASAASEAESIGQRHWRHAYQNLVWSRNS HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC QDFTGRCICPKTGKLLANADAVTLTSNLILKTMQQKLDPVRASVERTFFPEVAA CCCCCEEECCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MMDMCYSMPAVMGVQGGKVFYTVIMSMRVLVRMLRIDDAGSVLDRSQRKVNPARAKSIGN CCCHHHHCHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHCCC YMVANPTGYFLPGIIGVVEVPTGGDAPKFEASEISGVVGVLKVGLDSIIKLFDGQHRATG EEEECCCCCHHCCHHEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH IAKALETSPEIAQDSISITLYMNLSLQERQQAFTDINQNASKPPQGLSDTYNHRDELSKL HHHHHHCCCHHHHCCEEEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH TMDLVKQIDWMQGRVDFATNKPTAQSEFYWSFKQIKDATAIMLGTKKNFEPFHATLAYDF HHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHCCHHEEEEECCCCCCHHHHHHHHHH WNTMGAAMEFQSLGSKERETSLFTTTVMLKALASAASEAESIGQRHWRHAYQNLVWSRNS HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC QDFTGRCICPKTGKLLANADAVTLTSNLILKTMQQKLDPVRASVERTFFPEVAA CCCCCEEECCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA