| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160876508
Identifier: 160876508
GI number: 160876508
Start: 4019765
End: 4020394
Strand: Direct
Name: 160876508
Synonym: Sbal195_3402
Alternate gene names: NA
Gene position: 4019765-4020394 (Clockwise)
Preceding gene: 160876507
Following gene: 160876509
Centisome position: 75.17
GC content: 49.68
Gene sequence:
>630_bases ATGACACATCCAACGAGAACATCATTTTTAAGCGATGTGGCCGAACATCAACTCACCATTCTTAAAGATGATGGGGTGTT CCGTCACATGGTACTCAGCCAAGGCAGCTTTGAGCATCGCTTTGAGATCACCACATGGCCGCAGCATCTGTGCATCAGTG GCGATATGGGCTGTTACGTATTTTCTCGGGTTCAGGACATGTTTTGCTTCTTTCGCCAAAGCGGTGATGACTGGGGCGTG AACGCGAGTTACTGGGAAGAAAAGGTACTTGCTGAGTGTAAAACCGACGGCACTCGCGAGTTTGATGCCAAGGAAGCCGA TCAACGCCTTGAGCAGTTTTTGCAGTGGTTTGTCGAAGGGCTGGATCCAACGAACGAAGAAGAGGCTGAGGCAATTAACA GCGCGACCAATGCCGTTAAGGAGTTTACCCAAAACCGCGAAAACGCCGAGTGGGATGTGGTTTATCGCCTCAATAATTGG GATGAAGAAGAGGCAGGCGGCATGACGTTAGATGATTTTTGGGATGGCTGGAAAGACCCTTTCACCTATCGCTTTATCTG GTGCTGTTACGCAATTGTGTTTGCCATCCGCCAATACGATGAAGCGACCCAAAGCAAGGAGGCAGCATGA
Upstream 100 bases:
>100_bases CAAGGTGAACCCCAAAACCAAGAAACCCATCATCAATCTGGTGGTGTTTAACGGCGAAGCCGCAGCTTAGCCCTGCTGAT TCAAAAGGAAGGAATAGCGT
Downstream 100 bases:
>100_bases TGGATATGTGTTACTCAATGCCCGCGGTGATGGGCGTACAAGGTGGCAAAGTGTTTTACACCGTTATCATGTCGATGCGT GTGCTGGTTCGTATGTTACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 209; Mature: 208
Protein sequence:
>209_residues MTHPTRTSFLSDVAEHQLTILKDDGVFRHMVLSQGSFEHRFEITTWPQHLCISGDMGCYVFSRVQDMFCFFRQSGDDWGV NASYWEEKVLAECKTDGTREFDAKEADQRLEQFLQWFVEGLDPTNEEEAEAINSATNAVKEFTQNRENAEWDVVYRLNNW DEEEAGGMTLDDFWDGWKDPFTYRFIWCCYAIVFAIRQYDEATQSKEAA
Sequences:
>Translated_209_residues MTHPTRTSFLSDVAEHQLTILKDDGVFRHMVLSQGSFEHRFEITTWPQHLCISGDMGCYVFSRVQDMFCFFRQSGDDWGV NASYWEEKVLAECKTDGTREFDAKEADQRLEQFLQWFVEGLDPTNEEEAEAINSATNAVKEFTQNRENAEWDVVYRLNNW DEEEAGGMTLDDFWDGWKDPFTYRFIWCCYAIVFAIRQYDEATQSKEAA >Mature_208_residues THPTRTSFLSDVAEHQLTILKDDGVFRHMVLSQGSFEHRFEITTWPQHLCISGDMGCYVFSRVQDMFCFFRQSGDDWGVN ASYWEEKVLAECKTDGTREFDAKEADQRLEQFLQWFVEGLDPTNEEEAEAINSATNAVKEFTQNRENAEWDVVYRLNNWD EEEAGGMTLDDFWDGWKDPFTYRFIWCCYAIVFAIRQYDEATQSKEAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24504; Mature: 24373
Theoretical pI: Translated: 4.15; Mature: 4.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHPTRTSFLSDVAEHQLTILKDDGVFRHMVLSQGSFEHRFEITTWPQHLCISGDMGCYV CCCCHHHHHHHHHHHHHEEEECCCCHHHHHHHCCCCCCEEEEEECCCCHHEECCCCHHHH FSRVQDMFCFFRQSGDDWGVNASYWEEKVLAECKTDGTREFDAKEADQRLEQFLQWFVEG HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHC LDPTNEEEAEAINSATNAVKEFTQNRENAEWDVVYRLNNWDEEEAGGMTLDDFWDGWKDP CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHCCCCCHHHHHCCCCCC FTYRFIWCCYAIVFAIRQYDEATQSKEAA HHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure THPTRTSFLSDVAEHQLTILKDDGVFRHMVLSQGSFEHRFEITTWPQHLCISGDMGCYV CCCHHHHHHHHHHHHHEEEECCCCHHHHHHHCCCCCCEEEEEECCCCHHEECCCCHHHH FSRVQDMFCFFRQSGDDWGVNASYWEEKVLAECKTDGTREFDAKEADQRLEQFLQWFVEG HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHC LDPTNEEEAEAINSATNAVKEFTQNRENAEWDVVYRLNNWDEEEAGGMTLDDFWDGWKDP CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHCCCCCHHHHHCCCCCC FTYRFIWCCYAIVFAIRQYDEATQSKEAA HHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA