| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160876488
Identifier: 160876488
GI number: 160876488
Start: 4001197
End: 4002651
Strand: Reverse
Name: 160876488
Synonym: Sbal195_3382
Alternate gene names: NA
Gene position: 4002651-4001197 (Counterclockwise)
Preceding gene: 160876489
Following gene: 160876483
Centisome position: 74.85
GC content: 41.37
Gene sequence:
>1455_bases ATGATTGAAGTCCAAATAGCCGGAGCAGGTGCTGGTAAGACTCACGGCCTAGCTGAGAAGATCATCAAGCACTATGATGC TTCGTCATATAAGAAGATCTTTGCCATCACTTATACCAATAATGCTGCGAAGAACATTTCCGAAGCTATCATCAAGCAAT TTGGATACTTGCCAGAAAATATCATAGTTTGCACTGTTCATACGTTCCTATTGAATGAGATCATTTACCCTTACTCTCCG TTTGTTCTAAATGAAATACACACCACCTCCTCTCGATGCAAAACATTCTCAAACTTTCCGCCTGGCAAGTCTGAGGAAAA AAAACGACGAGAATCAGCGGGCACAATTAGCAGGCTAAAGAAGATTGGCGTGATACATGTCGATGAGACATATGCTGCGG CATGGAGAATTGTCGATGAAAACTACTCCAAACATAGCAGCCAGAAAAAGAAGTCTAAAGTTAGGAAAGTTCACAAGTTA CTAAGTAGCGCGATTGATAAGATTTTTCTCGACGAAGCTCAGGATCTTGATGAAACAGCTCTTAAGGCTTTTCAACAAAT CGGCGAGAATTCGGTTGACATTTACATGGTGGGTGACCCCAAGCAAGCAATAGATTATCCAACATCTTTCACAGAGTGGT TAGCTGCGAATAAAGCCAACGAAAAAGTTAAAGTACTTCCGAATATAACTACTTCTCGTAGGGTTCCACAGAGAATTCTT GACCTCTCAAACACCTTTTGCCCCAAAGGCCAAGAGCAAACTAGCTTGTCTGAAGTTGAAGGACGCCTAACATACATCAC TTCTGAAGATGATCATTACGACGACGTTCTCTGTCATCACATTGAGAATAGAAGTTTAGTGAGCATCTTCAGAAAAGAAG GTAATTACTCAACCAAACAAGCAGGGTCACTACCCGAGTTTGATCCTGAGGTAGAAGAGCTACTTACAGTAAAGTTTCCC GAATACGAAGAAGGCGTGGTCATATATTCATTACAGCGTTTCTTTGCCTCCCTGTTATCCAAGAATGACAACAACAAATC TATACGTAAATTTCTTGCCAAGCTGGAAATTCCGTATGACAAAGAGCTGTTCATAAAACTTTGCCGCTCAGCCGAGCAAT TTAGTTCATCTAAGGACAATTCGGCCAAGTATGCAATAAGCAGCATCCAACGAACTAAGGGCTTAGAGTCTAAGGTTTGT GTCTTAATCTTAACGCCAGCGATATTCAAATGCTTAATGCAGAATGGTGTAACCAAGTTCAACAAGACTTGGAATATGGT CTACGTCGCATTAACGAGAGCTGAGTCAGAGCTTGTTGTAGCAGTAGACATGGCTTTGCTTGGCAGAGGGTATAAGCATG ATGATATTGTTGAGAGCCTTGAATCTATTGGGTTTGAAGTGCTAAACCCGAATCTACCAAACCACAAAACCGAAGAAAAA TTAGAGGAAGCGTAA
Upstream 100 bases:
>100_bases CCGAAAGGATGCTCAAGATTGCAGACTCTATCTTAGATGAAATGAACAAAGATCCAATCATGCTACCCAAGCACATTCAA GAAGCCTTGGACTTCATGAA
Downstream 100 bases:
>100_bases TATCAACCACAGATAATTGCCAAACATCCGCTTTGTGCCGTGCAGATCATGTATAACAAGCTCAAATACTCGGAACAATT TTTCACTTTGCTCCAATTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 484; Mature: 484
Protein sequence:
>484_residues MIEVQIAGAGAGKTHGLAEKIIKHYDASSYKKIFAITYTNNAAKNISEAIIKQFGYLPENIIVCTVHTFLLNEIIYPYSP FVLNEIHTTSSRCKTFSNFPPGKSEEKKRRESAGTISRLKKIGVIHVDETYAAAWRIVDENYSKHSSQKKKSKVRKVHKL LSSAIDKIFLDEAQDLDETALKAFQQIGENSVDIYMVGDPKQAIDYPTSFTEWLAANKANEKVKVLPNITTSRRVPQRIL DLSNTFCPKGQEQTSLSEVEGRLTYITSEDDHYDDVLCHHIENRSLVSIFRKEGNYSTKQAGSLPEFDPEVEELLTVKFP EYEEGVVIYSLQRFFASLLSKNDNNKSIRKFLAKLEIPYDKELFIKLCRSAEQFSSSKDNSAKYAISSIQRTKGLESKVC VLILTPAIFKCLMQNGVTKFNKTWNMVYVALTRAESELVVAVDMALLGRGYKHDDIVESLESIGFEVLNPNLPNHKTEEK LEEA
Sequences:
>Translated_484_residues MIEVQIAGAGAGKTHGLAEKIIKHYDASSYKKIFAITYTNNAAKNISEAIIKQFGYLPENIIVCTVHTFLLNEIIYPYSP FVLNEIHTTSSRCKTFSNFPPGKSEEKKRRESAGTISRLKKIGVIHVDETYAAAWRIVDENYSKHSSQKKKSKVRKVHKL LSSAIDKIFLDEAQDLDETALKAFQQIGENSVDIYMVGDPKQAIDYPTSFTEWLAANKANEKVKVLPNITTSRRVPQRIL DLSNTFCPKGQEQTSLSEVEGRLTYITSEDDHYDDVLCHHIENRSLVSIFRKEGNYSTKQAGSLPEFDPEVEELLTVKFP EYEEGVVIYSLQRFFASLLSKNDNNKSIRKFLAKLEIPYDKELFIKLCRSAEQFSSSKDNSAKYAISSIQRTKGLESKVC VLILTPAIFKCLMQNGVTKFNKTWNMVYVALTRAESELVVAVDMALLGRGYKHDDIVESLESIGFEVLNPNLPNHKTEEK LEEA >Mature_484_residues MIEVQIAGAGAGKTHGLAEKIIKHYDASSYKKIFAITYTNNAAKNISEAIIKQFGYLPENIIVCTVHTFLLNEIIYPYSP FVLNEIHTTSSRCKTFSNFPPGKSEEKKRRESAGTISRLKKIGVIHVDETYAAAWRIVDENYSKHSSQKKKSKVRKVHKL LSSAIDKIFLDEAQDLDETALKAFQQIGENSVDIYMVGDPKQAIDYPTSFTEWLAANKANEKVKVLPNITTSRRVPQRIL DLSNTFCPKGQEQTSLSEVEGRLTYITSEDDHYDDVLCHHIENRSLVSIFRKEGNYSTKQAGSLPEFDPEVEELLTVKFP EYEEGVVIYSLQRFFASLLSKNDNNKSIRKFLAKLEIPYDKELFIKLCRSAEQFSSSKDNSAKYAISSIQRTKGLESKVC VLILTPAIFKCLMQNGVTKFNKTWNMVYVALTRAESELVVAVDMALLGRGYKHDDIVESLESIGFEVLNPNLPNHKTEEK LEEA
Specific function: Unknown
COG id: COG0210
COG function: function code L; Superfamily I DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54766; Mature: 54766
Theoretical pI: Translated: 7.58; Mature: 7.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEVQIAGAGAGKTHGLAEKIIKHYDASSYKKIFAITYTNNAAKNISEAIIKQFGYLPEN CEEEEEECCCCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCC IIVCTVHTFLLNEIIYPYSPFVLNEIHTTSSRCKTFSNFPPGKSEEKKRRESAGTISRLK EEEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH KIGVIHVDETYAAAWRIVDENYSKHSSQKKKSKVRKVHKLLSSAIDKIFLDEAQDLDETA HCCEEEECCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH LKAFQQIGENSVDIYMVGDPKQAIDYPTSFTEWLAANKANEKVKVLPNITTSRRVPQRIL HHHHHHHCCCCEEEEEECCCHHHHCCCCHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHH DLSNTFCPKGQEQTSLSEVEGRLTYITSEDDHYDDVLCHHIENRSLVSIFRKEGNYSTKQ HHHCCCCCCCCCHHHHHHHCCEEEEEECCCCCHHHHHHHHHCCCHHHHHHHHCCCCCCHH AGSLPEFDPEVEELLTVKFPEYEEGVVIYSLQRFFASLLSKNDNNKSIRKFLAKLEIPYD CCCCCCCCCCHHHHHEECCCCCCCCEEEHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCC KELFIKLCRSAEQFSSSKDNSAKYAISSIQRTKGLESKVCVLILTPAIFKCLMQNGVTKF HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHCCCHHH NKTWNMVYVALTRAESELVVAVDMALLGRGYKHDDIVESLESIGFEVLNPNLPNHKTEEK CCCCEEEEEEEEECCCCEEEEEEHHHHCCCCCCHHHHHHHHHCCEEEECCCCCCCCHHHH LEEA HHCC >Mature Secondary Structure MIEVQIAGAGAGKTHGLAEKIIKHYDASSYKKIFAITYTNNAAKNISEAIIKQFGYLPEN CEEEEEECCCCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCC IIVCTVHTFLLNEIIYPYSPFVLNEIHTTSSRCKTFSNFPPGKSEEKKRRESAGTISRLK EEEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH KIGVIHVDETYAAAWRIVDENYSKHSSQKKKSKVRKVHKLLSSAIDKIFLDEAQDLDETA HCCEEEECCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH LKAFQQIGENSVDIYMVGDPKQAIDYPTSFTEWLAANKANEKVKVLPNITTSRRVPQRIL HHHHHHHCCCCEEEEEECCCHHHHCCCCHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHH DLSNTFCPKGQEQTSLSEVEGRLTYITSEDDHYDDVLCHHIENRSLVSIFRKEGNYSTKQ HHHCCCCCCCCCHHHHHHHCCEEEEEECCCCCHHHHHHHHHCCCHHHHHHHHCCCCCCHH AGSLPEFDPEVEELLTVKFPEYEEGVVIYSLQRFFASLLSKNDNNKSIRKFLAKLEIPYD CCCCCCCCCCHHHHHEECCCCCCCCEEEHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCC KELFIKLCRSAEQFSSSKDNSAKYAISSIQRTKGLESKVCVLILTPAIFKCLMQNGVTKF HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHCCCHHH NKTWNMVYVALTRAESELVVAVDMALLGRGYKHDDIVESLESIGFEVLNPNLPNHKTEEK CCCCEEEEEEEEECCCCEEEEEEHHHHCCCCCCHHHHHHHHHCCEEEECCCCCCCCHHHH LEEA HHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA