| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160876489
Identifier: 160876489
GI number: 160876489
Start: 4002648
End: 4004357
Strand: Reverse
Name: 160876489
Synonym: Sbal195_3383
Alternate gene names: NA
Gene position: 4004357-4002648 (Counterclockwise)
Preceding gene: 160876490
Following gene: 160876488
Centisome position: 74.89
GC content: 40.7
Gene sequence:
>1710_bases ATGTACATTCGTACGGTCGAAATTGAAAACTACCGAGCCTTCAAAAGCTTCAAAATCAAACTTTCACCACTTAGCCTAAT TATCGGTGAAAACGAAGCAGGCAAAACCAACCTATTTGACGCACTTGCTCTGCCACTTAATAGCAACGACATAAGCTTCA ATAAGAAACGTCTATCTGTATCGGACATCAACCGCGAAGCAATCAAAGACTTTTATCAAGCTATCATCAACGGCAAGGGA GATGATGAGATCAAGGCTTTGATTCCAAAGGTTCGAGTTGAGGTCGAGTTCACTGACCCAAAGAACTTTATTGAAGAAGG CGTTATTGGTAAGTGGATAATCGGAGAAGAAGCCGACGAGAGTTATAAGATTCGGTACGACTTCAGGCCTAAAGATGCAG ATCATTTTGTAAAGAGTGCCAAAGAATTACTCGACGGCATTGAGGACATCAAAGAAACACGCTGGTTTAACTTACCAATT GAGCTTTACGACTATGATGTAACGCAAAGCAATAATGGGTTAAAGGTTAGCTATTCTGATTTAAGACTTATAGCCATCAA CTCTATCAACGCCGAGCGTGACGACTTTGCTGAAAATAATACACAGAAATCAAACAACATTCTGACAAAAATGCTTATTT CCGCTCTCGAGGATTCCGACAAGGCCAAGATTAACAGCGCGTACACTTCTTTCTTTGATGAAATCGAAAGTACAGAGACA TTCAAAAAAATCGTTACACCTGATCCAGACTTCGAGAACTTCTTCGACGAAATTGTTGATAAGCTTGAATGTATCCCCAA CCTGCCAAATTTAAAGAGCATCCTATCCAACATAACCTTGAAGTCTGGTGAAAGCTACCTATATCAGCGTGGCCTTGGGT ATCGTAATCTTGTTTTCATTTACCTATTATTTGAGTTCTTCAAAGGCAACAAGAATGCACTCAACCTCTGCTGTATCGAA GAACCTGAAGCACACCTTAGCGTCAACAACCTCCGCTTTGCAACTGACTTCATATACAAGAGCACACAAAAAGGCGGCTC ATCTCTACAAACGCTAATTAGCTCCCATAGCCCTCAAGTCATCAATAAACTTGAGCTAACTAACGTGATCGTCCTATCTG GAAATGAGGCCATACACCTAACTGATAGTAAGAAGCATCTCACTAATTACCTTCGTAAGCGGCCTAACTTCGATATTCTA AAACTGCTACTAAGCAATAAGACTGTACTCGTTGAAGGCACTACCGAAGAGATGCTGATCAACGCCATCCTCTACCGTAA TAACAAGAATTTGAGTAGTCTTGAAGTAATATCTATCGAGCAAACTGGCTTCATAACTTTCATGGACGTCTGGTTGCAAG TCAATAAAGGTAAACCAAAGAAGAAGCTAAGCATCATACGTGATTATGATGATAATAATGCGACCAAAGACAAGCACCAA AAATACGATATCGAAAACGACAATATAAGAGTAAGAACCACTACCCAATATACGCTCGAAGACGATCTAGCTGGAACCGC TGGAAACCTTCATCGCCTAAACACACTGTTCAACAAGAAGTGCAAAACCCCGGAAGAGATGGCCAAGTTCCTGAAAAATA GTAAAGCCGAAAGGATGCTCAAGATTGCAGACTCTATCTTAGATGAAATGAACAAAGATCCAATCATGCTACCCAAGCAC ATTCAAGAAGCCTTGGACTTCATGAAATGA
Upstream 100 bases:
>100_bases TTGACTAGAGTAATGGTGGCGATTCAGTTTGCTTTTAGCTTGGGTTGTTTAGTGTTAACTTTGTAAACAGGAGCACTAAC AATAACTACATGGAATACAA
Downstream 100 bases:
>100_bases TTGAAGTCCAAATAGCCGGAGCAGGTGCTGGTAAGACTCACGGCCTAGCTGAGAAGATCATCAAGCACTATGATGCTTCG TCATATAAGAAGATCTTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 569; Mature: 569
Protein sequence:
>569_residues MYIRTVEIENYRAFKSFKIKLSPLSLIIGENEAGKTNLFDALALPLNSNDISFNKKRLSVSDINREAIKDFYQAIINGKG DDEIKALIPKVRVEVEFTDPKNFIEEGVIGKWIIGEEADESYKIRYDFRPKDADHFVKSAKELLDGIEDIKETRWFNLPI ELYDYDVTQSNNGLKVSYSDLRLIAINSINAERDDFAENNTQKSNNILTKMLISALEDSDKAKINSAYTSFFDEIESTET FKKIVTPDPDFENFFDEIVDKLECIPNLPNLKSILSNITLKSGESYLYQRGLGYRNLVFIYLLFEFFKGNKNALNLCCIE EPEAHLSVNNLRFATDFIYKSTQKGGSSLQTLISSHSPQVINKLELTNVIVLSGNEAIHLTDSKKHLTNYLRKRPNFDIL KLLLSNKTVLVEGTTEEMLINAILYRNNKNLSSLEVISIEQTGFITFMDVWLQVNKGKPKKKLSIIRDYDDNNATKDKHQ KYDIENDNIRVRTTTQYTLEDDLAGTAGNLHRLNTLFNKKCKTPEEMAKFLKNSKAERMLKIADSILDEMNKDPIMLPKH IQEALDFMK
Sequences:
>Translated_569_residues MYIRTVEIENYRAFKSFKIKLSPLSLIIGENEAGKTNLFDALALPLNSNDISFNKKRLSVSDINREAIKDFYQAIINGKG DDEIKALIPKVRVEVEFTDPKNFIEEGVIGKWIIGEEADESYKIRYDFRPKDADHFVKSAKELLDGIEDIKETRWFNLPI ELYDYDVTQSNNGLKVSYSDLRLIAINSINAERDDFAENNTQKSNNILTKMLISALEDSDKAKINSAYTSFFDEIESTET FKKIVTPDPDFENFFDEIVDKLECIPNLPNLKSILSNITLKSGESYLYQRGLGYRNLVFIYLLFEFFKGNKNALNLCCIE EPEAHLSVNNLRFATDFIYKSTQKGGSSLQTLISSHSPQVINKLELTNVIVLSGNEAIHLTDSKKHLTNYLRKRPNFDIL KLLLSNKTVLVEGTTEEMLINAILYRNNKNLSSLEVISIEQTGFITFMDVWLQVNKGKPKKKLSIIRDYDDNNATKDKHQ KYDIENDNIRVRTTTQYTLEDDLAGTAGNLHRLNTLFNKKCKTPEEMAKFLKNSKAERMLKIADSILDEMNKDPIMLPKH IQEALDFMK >Mature_569_residues MYIRTVEIENYRAFKSFKIKLSPLSLIIGENEAGKTNLFDALALPLNSNDISFNKKRLSVSDINREAIKDFYQAIINGKG DDEIKALIPKVRVEVEFTDPKNFIEEGVIGKWIIGEEADESYKIRYDFRPKDADHFVKSAKELLDGIEDIKETRWFNLPI ELYDYDVTQSNNGLKVSYSDLRLIAINSINAERDDFAENNTQKSNNILTKMLISALEDSDKAKINSAYTSFFDEIESTET FKKIVTPDPDFENFFDEIVDKLECIPNLPNLKSILSNITLKSGESYLYQRGLGYRNLVFIYLLFEFFKGNKNALNLCCIE EPEAHLSVNNLRFATDFIYKSTQKGGSSLQTLISSHSPQVINKLELTNVIVLSGNEAIHLTDSKKHLTNYLRKRPNFDIL KLLLSNKTVLVEGTTEEMLINAILYRNNKNLSSLEVISIEQTGFITFMDVWLQVNKGKPKKKLSIIRDYDDNNATKDKHQ KYDIENDNIRVRTTTQYTLEDDLAGTAGNLHRLNTLFNKKCKTPEEMAKFLKNSKAERMLKIADSILDEMNKDPIMLPKH IQEALDFMK
Specific function: Unknown
COG id: COG3593
COG function: function code L; Predicted ATP-dependent endonuclease of the OLD family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65315; Mature: 65315
Theoretical pI: Translated: 5.64; Mature: 5.64
Prosite motif: PS00146 BETA_LACTAMASE_A
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYIRTVEIENYRAFKSFKIKLSPLSLIIGENEAGKTNLFDALALPLNSNDISFNKKRLSV CEEEEEEECCCEEEEEEEEEEEEEEEEEECCCCCCCCCHHHEEECCCCCCCCCCCCCCCH SDINREAIKDFYQAIINGKGDDEIKALIPKVRVEVEFTDPKNFIEEGVIGKWIIGEEADE HHCCHHHHHHHHHHHHCCCCCHHHHHHCCEEEEEEEECCCHHHHHCCCCEEEEECCCCCC SYKIRYDFRPKDADHFVKSAKELLDGIEDIKETRWFNLPIELYDYDVTQSNNGLKVSYSD CEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCEEEEEEEEEECCCCEEEEECC LRLIAINSINAERDDFAENNTQKSNNILTKMLISALEDSDKAKINSAYTSFFDEIESTET EEEEEEECCCCCCHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH FKKIVTPDPDFENFFDEIVDKLECIPNLPNLKSILSNITLKSGESYLYQRGLGYRNLVFI HHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCEECCCCHHHHHCCCCHHHHHHH YLLFEFFKGNKNALNLCCIEEPEAHLSVNNLRFATDFIYKSTQKGGSSLQTLISSHSPQV HHHHHHHCCCCCCEEEEEECCCCCCEEECCEEHHHHHHHHHHCCCCHHHHHHHHCCCCHH INKLELTNVIVLSGNEAIHLTDSKKHLTNYLRKRPNFDILKLLLSNKTVLVEGTTEEMLI HHHEEEEEEEEEECCCEEEEECCHHHHHHHHHHCCCHHHHHHHHCCCEEEEECCHHHHHH NAILYRNNKNLSSLEVISIEQTGFITFMDVWLQVNKGKPKKKLSIIRDYDDNNATKDKHQ HHHHEECCCCCCCEEEEEEECCCCEEEEEEEEEECCCCCHHHHEEEEECCCCCCCCCHHH KYDIENDNIRVRTTTQYTLEDDLAGTAGNLHRLNTLFNKKCKTPEEMAKFLKNSKAERML CCCCCCCCEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHH KIADSILDEMNKDPIMLPKHIQEALDFMK HHHHHHHHHCCCCCCCCHHHHHHHHHHCC >Mature Secondary Structure MYIRTVEIENYRAFKSFKIKLSPLSLIIGENEAGKTNLFDALALPLNSNDISFNKKRLSV CEEEEEEECCCEEEEEEEEEEEEEEEEEECCCCCCCCCHHHEEECCCCCCCCCCCCCCCH SDINREAIKDFYQAIINGKGDDEIKALIPKVRVEVEFTDPKNFIEEGVIGKWIIGEEADE HHCCHHHHHHHHHHHHCCCCCHHHHHHCCEEEEEEEECCCHHHHHCCCCEEEEECCCCCC SYKIRYDFRPKDADHFVKSAKELLDGIEDIKETRWFNLPIELYDYDVTQSNNGLKVSYSD CEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCEEEEEEEEEECCCCEEEEECC LRLIAINSINAERDDFAENNTQKSNNILTKMLISALEDSDKAKINSAYTSFFDEIESTET EEEEEEECCCCCCHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH FKKIVTPDPDFENFFDEIVDKLECIPNLPNLKSILSNITLKSGESYLYQRGLGYRNLVFI HHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCEECCCCHHHHHCCCCHHHHHHH YLLFEFFKGNKNALNLCCIEEPEAHLSVNNLRFATDFIYKSTQKGGSSLQTLISSHSPQV HHHHHHHCCCCCCEEEEEECCCCCCEEECCEEHHHHHHHHHHCCCCHHHHHHHHCCCCHH INKLELTNVIVLSGNEAIHLTDSKKHLTNYLRKRPNFDILKLLLSNKTVLVEGTTEEMLI HHHEEEEEEEEEECCCEEEEECCHHHHHHHHHHCCCHHHHHHHHCCCEEEEECCHHHHHH NAILYRNNKNLSSLEVISIEQTGFITFMDVWLQVNKGKPKKKLSIIRDYDDNNATKDKHQ HHHHEECCCCCCCEEEEEEECCCCEEEEEEEEEECCCCCHHHHEEEEECCCCCCCCCHHH KYDIENDNIRVRTTTQYTLEDDLAGTAGNLHRLNTLFNKKCKTPEEMAKFLKNSKAERML CCCCCCCCEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHH KIADSILDEMNKDPIMLPKHIQEALDFMK HHHHHHHHHCCCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA