| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is yeiJ [C]
Identifier: 160876474
GI number: 160876474
Start: 3977605
End: 3978864
Strand: Reverse
Name: yeiJ [C]
Synonym: Sbal195_3368
Alternate gene names: 160876474
Gene position: 3978864-3977605 (Counterclockwise)
Preceding gene: 160876475
Following gene: 160876473
Centisome position: 74.41
GC content: 45.16
Gene sequence:
>1260_bases ATGAATATATTGATGAGTTTAGTAGGGGTGGTCACCCTACTTGCGATAGGTTTCCTCCTATCGAATAACAAAAAAGCAAT TAATTTACGTACAGTGGGTGGCGCTTTAGCTATCCAGGCCGCTTTCGGTGGTTTTGTACTGTACGTTCCTGTTGGTAAAG ACATTCTGAAAGGTATGTCTGATGCAGTTTCTAGCGTTATTGGTTACGCACAAAACGGTATCGGTTTCCTGTTCGGTGAT TTAGCTAACTTTAAACTTGGCTTCATCTTCGCAGTTAACGTGTTACCCGTTATTGTGTTCTTCTCTTCATTGATTGCTGT GCTGTATTACTTAGGCATCATGCAGTGGGTTATCCGTATTATCGGTGGCGCGCTACAAAAAGCATTAGGTACAAGCCGTA CAGAATCAATGTCAGCAACAGCTAACATCTTCGTGGGTCAAACTGAAGCGCCATTAGTGGTTCGTCCATTCATTCCAACT ATGACGCAGTCTGAACTGTTTGCGATCATGGTGGGTGGTTTGGCGTCAATCGCGGGTTCAGTTTTGGCTGGTTACGCGCA GATGGGTGTACCTATCGAGTACTTAGTTGCCGCATCATTCATGGCAGCACCAGGTGGTCTATTAATGGCTAAACTGATGC ACCCTGAAACTGAAGTTGCTAAGAATGACATGAGCGATTTGCCAGAAGATCCTGACAAACCAGCTAACGTGTTAGATGCA GCTGCTGCAGGTGCTTCATCTGGTATGCACTTAGCGTTAAACGTAGGTGCTATGTTGTTAGCCTTCGTTGGTTTGATCGC TATGATCAACGGTATCATTGGTGGTATCGGTGGTTGGGTGGGCATGCCTCAGTTAACACTTGAGCTGATCCTTGGCTATG TGTTCATGCCTTTAGCATTCCTTATCGGTGTACCTTGGAATGAAGCATTAGTCGCTGGTTCTTTCATCGGTCAAAAGATC GTAGTTAACGAATTTGTTGCTTACTTAAACTTTGCTCCATACCTGAAAGACATCGCTGATGGCGGTATGGTAGTAGCTGA AACGGGTCTAGCAATGACTGACAGAACCAAAGCGATTATCTCCTTTGCTCTGTGTGGTTTCGCTAACTTGTCTTCAATCG CGATTCTGCTTGGTGGTTTAGGTGCTATGGCTCCAACTCGTCGCCATGACTTAGCTACAATGGGTATTCGTGCGGTTATC GCCGGCTCTTTAGCTAACTTAATGAGTGCGACACTTGCTGGTCTGTTCTTAGCTATGTAA
Upstream 100 bases:
>100_bases TCAAAACGACGATTTTCGACTTGGGCTCGGGTATAATCTGACTCGGAAATAGGTTGATTAACAACATAATTAAAAAGTGT TAACAATAGGGTGATGGTTA
Downstream 100 bases:
>100_bases GTTAATGAGCGGCAGTCGGGGGAAACCCCACTAACTAGGTCCTGACCATGCAGGGCGGGACCTAAGTTAATTCAACCATT TTCCAGTAGTGATTCCTGTA
Product: nucleoside transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 419; Mature: 419
Protein sequence:
>419_residues MNILMSLVGVVTLLAIGFLLSNNKKAINLRTVGGALAIQAAFGGFVLYVPVGKDILKGMSDAVSSVIGYAQNGIGFLFGD LANFKLGFIFAVNVLPVIVFFSSLIAVLYYLGIMQWVIRIIGGALQKALGTSRTESMSATANIFVGQTEAPLVVRPFIPT MTQSELFAIMVGGLASIAGSVLAGYAQMGVPIEYLVAASFMAAPGGLLMAKLMHPETEVAKNDMSDLPEDPDKPANVLDA AAAGASSGMHLALNVGAMLLAFVGLIAMINGIIGGIGGWVGMPQLTLELILGYVFMPLAFLIGVPWNEALVAGSFIGQKI VVNEFVAYLNFAPYLKDIADGGMVVAETGLAMTDRTKAIISFALCGFANLSSIAILLGGLGAMAPTRRHDLATMGIRAVI AGSLANLMSATLAGLFLAM
Sequences:
>Translated_419_residues MNILMSLVGVVTLLAIGFLLSNNKKAINLRTVGGALAIQAAFGGFVLYVPVGKDILKGMSDAVSSVIGYAQNGIGFLFGD LANFKLGFIFAVNVLPVIVFFSSLIAVLYYLGIMQWVIRIIGGALQKALGTSRTESMSATANIFVGQTEAPLVVRPFIPT MTQSELFAIMVGGLASIAGSVLAGYAQMGVPIEYLVAASFMAAPGGLLMAKLMHPETEVAKNDMSDLPEDPDKPANVLDA AAAGASSGMHLALNVGAMLLAFVGLIAMINGIIGGIGGWVGMPQLTLELILGYVFMPLAFLIGVPWNEALVAGSFIGQKI VVNEFVAYLNFAPYLKDIADGGMVVAETGLAMTDRTKAIISFALCGFANLSSIAILLGGLGAMAPTRRHDLATMGIRAVI AGSLANLMSATLAGLFLAM >Mature_419_residues MNILMSLVGVVTLLAIGFLLSNNKKAINLRTVGGALAIQAAFGGFVLYVPVGKDILKGMSDAVSSVIGYAQNGIGFLFGD LANFKLGFIFAVNVLPVIVFFSSLIAVLYYLGIMQWVIRIIGGALQKALGTSRTESMSATANIFVGQTEAPLVVRPFIPT MTQSELFAIMVGGLASIAGSVLAGYAQMGVPIEYLVAASFMAAPGGLLMAKLMHPETEVAKNDMSDLPEDPDKPANVLDA AAAGASSGMHLALNVGAMLLAFVGLIAMINGIIGGIGGWVGMPQLTLELILGYVFMPLAFLIGVPWNEALVAGSFIGQKI VVNEFVAYLNFAPYLKDIADGGMVVAETGLAMTDRTKAIISFALCGFANLSSIAILLGGLGAMAPTRRHDLATMGIRAVI AGSLANLMSATLAGLFLAM
Specific function: Unknown
COG id: COG1972
COG function: function code F; Nucleoside permease
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family [H]
Homologues:
Organism=Homo sapiens, GI11545853, Length=374, Percent_Identity=41.4438502673797, Blast_Score=298, Evalue=5e-81, Organism=Homo sapiens, GI227116277, Length=415, Percent_Identity=38.0722891566265, Blast_Score=286, Evalue=2e-77, Organism=Homo sapiens, GI42542381, Length=414, Percent_Identity=36.9565217391304, Blast_Score=284, Evalue=1e-76, Organism=Escherichia coli, GI1788485, Length=426, Percent_Identity=47.4178403755869, Blast_Score=369, Evalue=1e-103, Organism=Escherichia coli, GI1788488, Length=426, Percent_Identity=49.2957746478873, Blast_Score=360, Evalue=1e-101, Organism=Escherichia coli, GI1788737, Length=413, Percent_Identity=30.2663438256659, Blast_Score=177, Evalue=2e-45, Organism=Caenorhabditis elegans, GI17560276, Length=404, Percent_Identity=30.6930693069307, Blast_Score=208, Evalue=4e-54, Organism=Caenorhabditis elegans, GI71991794, Length=407, Percent_Identity=30.7125307125307, Blast_Score=204, Evalue=9e-53, Organism=Caenorhabditis elegans, GI25146537, Length=194, Percent_Identity=33.5051546391753, Blast_Score=113, Evalue=2e-25, Organism=Drosophila melanogaster, GI45552517, Length=415, Percent_Identity=38.5542168674699, Blast_Score=293, Evalue=2e-79, Organism=Drosophila melanogaster, GI19921868, Length=415, Percent_Identity=38.5542168674699, Blast_Score=293, Evalue=2e-79, Organism=Drosophila melanogaster, GI45552519, Length=415, Percent_Identity=38.5542168674699, Blast_Score=293, Evalue=2e-79, Organism=Drosophila melanogaster, GI281360430, Length=411, Percent_Identity=36.9829683698297, Blast_Score=263, Evalue=2e-70,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008276 - InterPro: IPR018270 - InterPro: IPR011642 - InterPro: IPR011657 - InterPro: IPR002668 [H]
Pfam domain/function: PF07670 Gate; PF07662 Nucleos_tra2_C; PF01773 Nucleos_tra2_N [H]
EC number: NA
Molecular weight: Translated: 43490; Mature: 43490
Theoretical pI: Translated: 5.73; Mature: 5.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 5.5 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNILMSLVGVVTLLAIGFLLSNNKKAINLRTVGGALAIQAAFGGFVLYVPVGKDILKGMS CHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHCCEEEEEECCHHHHHHHH DAVSSVIGYAQNGIGFLFGDLANFKLGFIFAVNVLPVIVFFSSLIAVLYYLGIMQWVIRI HHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IGGALQKALGTSRTESMSATANIFVGQTEAPLVVRPFIPTMTQSELFAIMVGGLASIAGS HHHHHHHHHCCCCHHHHCCCEEEEEECCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHH VLAGYAQMGVPIEYLVAASFMAAPGGLLMAKLMHPETEVAKNDMSDLPEDPDKPANVLDA HHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHCHHHCCCCCCCCCHHHHHH AAAGASSGMHLALNVGAMLLAFVGLIAMINGIIGGIGGWVGMPQLTLELILGYVFMPLAF HHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH LIGVPWNEALVAGSFIGQKIVVNEFVAYLNFAPYLKDIADGGMVVAETGLAMTDRTKAII HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHH SFALCGFANLSSIAILLGGLGAMAPTRRHDLATMGIRAVIAGSLANLMSATLAGLFLAM HHHHHHHCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNILMSLVGVVTLLAIGFLLSNNKKAINLRTVGGALAIQAAFGGFVLYVPVGKDILKGMS CHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHCCEEEEEECCHHHHHHHH DAVSSVIGYAQNGIGFLFGDLANFKLGFIFAVNVLPVIVFFSSLIAVLYYLGIMQWVIRI HHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IGGALQKALGTSRTESMSATANIFVGQTEAPLVVRPFIPTMTQSELFAIMVGGLASIAGS HHHHHHHHHCCCCHHHHCCCEEEEEECCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHH VLAGYAQMGVPIEYLVAASFMAAPGGLLMAKLMHPETEVAKNDMSDLPEDPDKPANVLDA HHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHCHHHCCCCCCCCCHHHHHH AAAGASSGMHLALNVGAMLLAFVGLIAMINGIIGGIGGWVGMPQLTLELILGYVFMPLAF HHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH LIGVPWNEALVAGSFIGQKIVVNEFVAYLNFAPYLKDIADGGMVVAETGLAMTDRTKAII HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHH SFALCGFANLSSIAILLGGLGAMAPTRRHDLATMGIRAVIAGSLANLMSATLAGLFLAM HHHHHHHCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]