| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160876441
Identifier: 160876441
GI number: 160876441
Start: 3933676
End: 3934518
Strand: Reverse
Name: 160876441
Synonym: Sbal195_3335
Alternate gene names: NA
Gene position: 3934518-3933676 (Counterclockwise)
Preceding gene: 160876445
Following gene: 160876440
Centisome position: 73.58
GC content: 46.62
Gene sequence:
>843_bases ATGTCTACCGAACATCTACTGTTAGTCAGTTTATTAAAAAAACTAAAAGATGATGCCTTAGTGCTACCGACGTTGCCGGA AGTGGCGATGCGGGTGCAAGAAGTGGTCGGACGCTCCGATGCTAGCCTTAAACAAGTGGCTGAAGTGATCGGCCAAGATG CGGCGATTTCTGCCCGTATCATTAAGGTGGCCAATAGCGCCTTATACAGTCGAGGCGTACCCGCTGAAAGTATTAACAGT GCGGTCTCACGCATTGGTTTAATCCAAATTAAAAGCATCGCAACTTCGGTGGCTATGGAGCAATTATTCATTTCCACCAA TGAAATGGTGTGGGAAGTCATGGATGAAGTGTGGCGTACCTCAATCGATGTGACCGCAGCCGCCTGTGCCATGTTGCAGA TGTATAATAAACGCCATTCAACCAGTCGATTAAATTTTGATACCTTAACCTTAGCCGGACTCGTACATAACATCGGCGCT TTACCTGTGTTGACCGAAGCTGAGGCGCAGCCGCATTTATTTACGAGCATTGATCAATTACGTGCGCTTGTTCGTAAAAT GCAGGGGCCATTAGGTCGTGCTGTGTTAAAGAGTTGGGATTTTTCTACCGAAGTGATGGAGGTGGTTGAGCGCTGGGCCG ATTTACCTTATCTGCCCGATCACGTCACCTATCTCGACTTTATCCGTGCAGCGGCCTTCTATACAGGTGAATTACGTGCT GGCACTGAGTTAGAACAACGTCTTGGTGTGTTTGTCGCCCGTGGTTTACCCGTGACAACCGATGATTTAGCCAGTGATGA ATTTATGGAAAAATTCCATTCAATTAGAGAAAGTTACCAATAA
Upstream 100 bases:
>100_bases ATTTATTAACGTCCGTTGCTTTTTTCTACGTATCTAATGACGGTCAGCTGATATACTCCAACTATCCAATGTTCATGTTT ACAGATTGATGGGAGCTAAG
Downstream 100 bases:
>100_bases TCGTTAGGCCTAAATGGAACTCAAATGGCACGTGAACACTGAATTGCAGTGCCATTCGATAAAAAGCTTACGCGGTAAAG CAGAGGCCAAGGTATGTTCG
Product: putative signal transduction protein
Products: NA
Alternate protein names: Metal Dependent Phosphohydrolase; Metal-Dependent Hydrolase HDOD; Cytoplasmic Protein; Metal-Dependent Phosphohydrolase; HD Family Protein; Histidine Kinase; Diguanylate Cyclase; Metal-Dependent Phosphoesterase
Number of amino acids: Translated: 280; Mature: 279
Protein sequence:
>280_residues MSTEHLLLVSLLKKLKDDALVLPTLPEVAMRVQEVVGRSDASLKQVAEVIGQDAAISARIIKVANSALYSRGVPAESINS AVSRIGLIQIKSIATSVAMEQLFISTNEMVWEVMDEVWRTSIDVTAAACAMLQMYNKRHSTSRLNFDTLTLAGLVHNIGA LPVLTEAEAQPHLFTSIDQLRALVRKMQGPLGRAVLKSWDFSTEVMEVVERWADLPYLPDHVTYLDFIRAAAFYTGELRA GTELEQRLGVFVARGLPVTTDDLASDEFMEKFHSIRESYQ
Sequences:
>Translated_280_residues MSTEHLLLVSLLKKLKDDALVLPTLPEVAMRVQEVVGRSDASLKQVAEVIGQDAAISARIIKVANSALYSRGVPAESINS AVSRIGLIQIKSIATSVAMEQLFISTNEMVWEVMDEVWRTSIDVTAAACAMLQMYNKRHSTSRLNFDTLTLAGLVHNIGA LPVLTEAEAQPHLFTSIDQLRALVRKMQGPLGRAVLKSWDFSTEVMEVVERWADLPYLPDHVTYLDFIRAAAFYTGELRA GTELEQRLGVFVARGLPVTTDDLASDEFMEKFHSIRESYQ >Mature_279_residues STEHLLLVSLLKKLKDDALVLPTLPEVAMRVQEVVGRSDASLKQVAEVIGQDAAISARIIKVANSALYSRGVPAESINSA VSRIGLIQIKSIATSVAMEQLFISTNEMVWEVMDEVWRTSIDVTAAACAMLQMYNKRHSTSRLNFDTLTLAGLVHNIGAL PVLTEAEAQPHLFTSIDQLRALVRKMQGPLGRAVLKSWDFSTEVMEVVERWADLPYLPDHVTYLDFIRAAAFYTGELRAG TELEQRLGVFVARGLPVTTDDLASDEFMEKFHSIRESYQ
Specific function: Unknown
COG id: COG1639
COG function: function code T; Predicted signal transduction protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31078; Mature: 30947
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTEHLLLVSLLKKLKDDALVLPTLPEVAMRVQEVVGRSDASLKQVAEVIGQDAAISARI CCCCHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHH IKVANSALYSRGVPAESINSAVSRIGLIQIKSIATSVAMEQLFISTNEMVWEVMDEVWRT HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SIDVTAAACAMLQMYNKRHSTSRLNFDTLTLAGLVHNIGALPVLTEAEAQPHLFTSIDQL HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHH RALVRKMQGPLGRAVLKSWDFSTEVMEVVERWADLPYLPDHVTYLDFIRAAAFYTGELRA HHHHHHHHCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCC GTELEQRLGVFVARGLPVTTDDLASDEFMEKFHSIRESYQ CHHHHHHHHHHHHCCCCCCCHHHCHHHHHHHHHHHHHCCC >Mature Secondary Structure STEHLLLVSLLKKLKDDALVLPTLPEVAMRVQEVVGRSDASLKQVAEVIGQDAAISARI CCCHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHH IKVANSALYSRGVPAESINSAVSRIGLIQIKSIATSVAMEQLFISTNEMVWEVMDEVWRT HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SIDVTAAACAMLQMYNKRHSTSRLNFDTLTLAGLVHNIGALPVLTEAEAQPHLFTSIDQL HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHH RALVRKMQGPLGRAVLKSWDFSTEVMEVVERWADLPYLPDHVTYLDFIRAAAFYTGELRA HHHHHHHHCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCC GTELEQRLGVFVARGLPVTTDDLASDEFMEKFHSIRESYQ CHHHHHHHHHHHHCCCCCCCHHHCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA