| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is surE [H]
Identifier: 160876380
GI number: 160876380
Start: 3855635
End: 3856384
Strand: Reverse
Name: surE [H]
Synonym: Sbal195_3274
Alternate gene names: 160876380
Gene position: 3856384-3855635 (Counterclockwise)
Preceding gene: 160876381
Following gene: 160876379
Centisome position: 72.12
GC content: 48.67
Gene sequence:
>750_bases ATGATCCGCATCTTAGTGAGCAACGATGATGGGGTTAATGCTCCGGGGATCAAAGCCTTAACTGAGGCCTTGGCTGAAAT TGCGACTGTGCTGACAGTGGGGCCAGATCGTAATTGTTCTGGTGCGAGCAATTCATTAACCTTGACTAATCCATTAAGAA TTAATAGGTTAGATAACGGTTACATTTCTGTTCACGGTACACCGACTGATTGTGTGCATTTGGCTATCCGAGAATTGTAC GATGGCGAACCCGATATGGTGGTGTCTGGTATCAATGCTGGCGCGAACATGGGCGATGATACCTTGTATTCGGGGACTGT CGCTGCCGCGATGGAAGGGCGCTTTTTAGGTTTTCCTGCGGTCGCGATTTCGCTCAATGGCCGCAAATTCGAACATTATC AATCGGCGGCTGTTTACGCTCGGCGGATAGTTCAAGGCTTGTTGGCCCAGCCTTTGGCAAAGGATCAGATTTTAAATGTG AATGTGCCGGACTTGCCGCTTGATCAAATCAAAGGCATTAAAGTGACTCGTCTTGGGGCTCGTCATAAGGCTGAAGGCAT AGTACGAACGCAAGATCCCGCTGGACGTGAGATCTTCTGGCTCGGCCCTCCAGGACAAGAGCAGGATGCCACTGACGGCA CTGATTTTCATGCTGTCGCCAATGGCTATGTGTCAATTACGCCTTTGACGGTTGATTTAACTGCCTACGGACAACTAACG GCATTGCAAAATTGGGTAGATAAAATATGA
Upstream 100 bases:
>100_bases CACTGGTGCAGGAGCCTGCGCCAGAGGCAACGAATGCTAACGTAGCGGCTGATACAATTGAAACTAAGACTGAAGTTGCA CCTAACACTGAAGCAGAGTC
Downstream 100 bases:
>100_bases CTCGAGTTGCCTTAACATCGGCGGTGAACTTAGCTAAAAAGCTTCATGATGCGGGGATCCGTAATCAAGCCGTGTTAAAG GCGATATCGCATACGCCGCG
Product: stationary phase survival protein SurE
Products: NA
Alternate protein names: Nucleoside 5'-monophosphate phosphohydrolase [H]
Number of amino acids: Translated: 249; Mature: 249
Protein sequence:
>249_residues MIRILVSNDDGVNAPGIKALTEALAEIATVLTVGPDRNCSGASNSLTLTNPLRINRLDNGYISVHGTPTDCVHLAIRELY DGEPDMVVSGINAGANMGDDTLYSGTVAAAMEGRFLGFPAVAISLNGRKFEHYQSAAVYARRIVQGLLAQPLAKDQILNV NVPDLPLDQIKGIKVTRLGARHKAEGIVRTQDPAGREIFWLGPPGQEQDATDGTDFHAVANGYVSITPLTVDLTAYGQLT ALQNWVDKI
Sequences:
>Translated_249_residues MIRILVSNDDGVNAPGIKALTEALAEIATVLTVGPDRNCSGASNSLTLTNPLRINRLDNGYISVHGTPTDCVHLAIRELY DGEPDMVVSGINAGANMGDDTLYSGTVAAAMEGRFLGFPAVAISLNGRKFEHYQSAAVYARRIVQGLLAQPLAKDQILNV NVPDLPLDQIKGIKVTRLGARHKAEGIVRTQDPAGREIFWLGPPGQEQDATDGTDFHAVANGYVSITPLTVDLTAYGQLT ALQNWVDKI >Mature_249_residues MIRILVSNDDGVNAPGIKALTEALAEIATVLTVGPDRNCSGASNSLTLTNPLRINRLDNGYISVHGTPTDCVHLAIRELY DGEPDMVVSGINAGANMGDDTLYSGTVAAAMEGRFLGFPAVAISLNGRKFEHYQSAAVYARRIVQGLLAQPLAKDQILNV NVPDLPLDQIKGIKVTRLGARHKAEGIVRTQDPAGREIFWLGPPGQEQDATDGTDFHAVANGYVSITPLTVDLTAYGQLT ALQNWVDKI
Specific function: Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates [H]
COG id: COG0496
COG function: function code R; Predicted acid phosphatase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the surE nucleotidase family [H]
Homologues:
Organism=Escherichia coli, GI1789101, Length=249, Percent_Identity=58.6345381526104, Blast_Score=288, Evalue=3e-79,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002828 [H]
Pfam domain/function: PF01975 SurE [H]
EC number: =3.1.3.5 [H]
Molecular weight: Translated: 26601; Mature: 26601
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRILVSNDDGVNAPGIKALTEALAEIATVLTVGPDRNCSGASNSLTLTNPLRINRLDNG CEEEEEECCCCCCCCCHHHHHHHHHHHHHHEEECCCCCCCCCCCCEEEECCEEEEEECCC YISVHGTPTDCVHLAIRELYDGEPDMVVSGINAGANMGDDTLYSGTVAAAMEGRFLGFPA EEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEECCEEEEHHCCCEECCCE VAISLNGRKFEHYQSAAVYARRIVQGLLAQPLAKDQILNVNVPDLPLDQIKGIKVTRLGA EEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCHHHHCCEEEEECCC RHKAEGIVRTQDPAGREIFWLGPPGQEQDATDGTDFHAVANGYVSITPLTVDLTAYGQLT CHHCCCCEECCCCCCCEEEEECCCCCCCCCCCCCCEEEEECCEEEEEEEEEEEECCCHHH ALQNWVDKI HHHHHHHCC >Mature Secondary Structure MIRILVSNDDGVNAPGIKALTEALAEIATVLTVGPDRNCSGASNSLTLTNPLRINRLDNG CEEEEEECCCCCCCCCHHHHHHHHHHHHHHEEECCCCCCCCCCCCEEEECCEEEEEECCC YISVHGTPTDCVHLAIRELYDGEPDMVVSGINAGANMGDDTLYSGTVAAAMEGRFLGFPA EEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEECCEEEEHHCCCEECCCE VAISLNGRKFEHYQSAAVYARRIVQGLLAQPLAKDQILNVNVPDLPLDQIKGIKVTRLGA EEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCHHHHCCEEEEECCC RHKAEGIVRTQDPAGREIFWLGPPGQEQDATDGTDFHAVANGYVSITPLTVDLTAYGQLT CHHCCCCEECCCCCCCEEEEECCCCCCCCCCCCCCEEEEECCEEEEEEEEEEEECCCHHH ALQNWVDKI HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA