| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is recX [H]
Identifier: 160876374
GI number: 160876374
Start: 3848231
End: 3848644
Strand: Reverse
Name: recX [H]
Synonym: Sbal195_3268
Alternate gene names: 160876374
Gene position: 3848644-3848231 (Counterclockwise)
Preceding gene: 160876375
Following gene: 160876373
Centisome position: 71.97
GC content: 45.65
Gene sequence:
>414_bases TTGCTCGAAAAAGGCTTCGAACTTAACGATATCGAACCTGTGCTCGATGCATGTGAATCCTCCGGTTTTATCAATGACAA TCGTTATGCCGAATTGTTGGTCCGTAGCCACATTAGTCGAGGCCACGGCGCGATTCGTATTCGCCAAGCGATAGCGCAAA AAGGCCTGTCTAAAGATTGCATTGAAGCGGCGATAACCAATAGTGATTGTGACTGGTTTGAGCTAGCAAAAGATAAAGCC ACTAAAAAATATGGAATTCCCCGCGTAACAGAAGTGAAGGGCTCTAAAGCCCGGGATCTCATCGCGAAGGAAAAGGCCAA ACGAGTGCGGTTTTTAATGGGCCAAGGCTTTAGCTACGATCAAATCACTTATGCGTTAGATTCCGATCCCAATGATCTCG ACGACGATTATTAA
Upstream 100 bases:
>100_bases ATTTAGAAACAGGCGAAGTATTCTGAGTCAGTCAGCCCGTCAAATCGCGGTCGCGCTGTTAGCGCGCCGCGATTATTCCC GCCTACAAATCCGCGATAAA
Downstream 100 bases:
>100_bases TCGCCTCAACTCATCGATTGCGATGTAATCTTAAGACTGTAAAAGCTCCTTTTAACAAGTCCTCAGAAAATCTCCTCTAA AATGTCATCAAATGTGCTTT
Product: regulatory protein RecX
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 137; Mature: 137
Protein sequence:
>137_residues MLEKGFELNDIEPVLDACESSGFINDNRYAELLVRSHISRGHGAIRIRQAIAQKGLSKDCIEAAITNSDCDWFELAKDKA TKKYGIPRVTEVKGSKARDLIAKEKAKRVRFLMGQGFSYDQITYALDSDPNDLDDDY
Sequences:
>Translated_137_residues MLEKGFELNDIEPVLDACESSGFINDNRYAELLVRSHISRGHGAIRIRQAIAQKGLSKDCIEAAITNSDCDWFELAKDKA TKKYGIPRVTEVKGSKARDLIAKEKAKRVRFLMGQGFSYDQITYALDSDPNDLDDDY >Mature_137_residues MLEKGFELNDIEPVLDACESSGFINDNRYAELLVRSHISRGHGAIRIRQAIAQKGLSKDCIEAAITNSDCDWFELAKDKA TKKYGIPRVTEVKGSKARDLIAKEKAKRVRFLMGQGFSYDQITYALDSDPNDLDDDY
Specific function: Modulates recA activity [H]
COG id: COG2137
COG function: function code R; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the recX family [H]
Homologues:
Organism=Escherichia coli, GI1789050, Length=114, Percent_Identity=35.9649122807018, Blast_Score=79, Evalue=9e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003783 [H]
Pfam domain/function: PF02631 RecX [H]
EC number: NA
Molecular weight: Translated: 15420; Mature: 15420
Theoretical pI: Translated: 5.30; Mature: 5.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEKGFELNDIEPVLDACESSGFINDNRYAELLVRSHISRGHGAIRIRQAIAQKGLSKDC CCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHH IEAAITNSDCDWFELAKDKATKKYGIPRVTEVKGSKARDLIAKEKAKRVRFLMGQGFSYD HHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC QITYALDSDPNDLDDDY CEEEEECCCCCCCCCCC >Mature Secondary Structure MLEKGFELNDIEPVLDACESSGFINDNRYAELLVRSHISRGHGAIRIRQAIAQKGLSKDC CCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHH IEAAITNSDCDWFELAKDKATKKYGIPRVTEVKGSKARDLIAKEKAKRVRFLMGQGFSYD HHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC QITYALDSDPNDLDDDY CEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12368813 [H]