| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160876357
Identifier: 160876357
GI number: 160876357
Start: 3824864
End: 3827230
Strand: Direct
Name: 160876357
Synonym: Sbal195_3251
Alternate gene names: NA
Gene position: 3824864-3827230 (Clockwise)
Preceding gene: 160876353
Following gene: 160876361
Centisome position: 71.53
GC content: 50.78
Gene sequence:
>2367_bases ATGATGAACACGAATACCCGTTCTCAATGGAAAATCTTTACGCCAATTGCTGTTGCAGTCTGTCTGATGACCGCCTGTTC CGATGGTGAAGAGGGTAAAGAAGGCCCATCTGGAATTGTGAGTATCAGCATAGAACAGGCCAATACTCTTAAAGCGACAA TCGAAAAAGTCGCTATCGATGCGCAAACTCAAGTGCAGGTCGATTTCTTTCTCAGTAACGCCAATGGCATTGCCGTCACT GGACTAGAAAACCTTAAGGAGCTAGATACCTTAGGCCTTGGTATCGCCAAGCTTGCACCGCCGCAGGCGCACTATCACAT CACTCAAGCCACAGCTGACGCTGCGGCGCAGAATAGCGCTGTCGCAATAGGAGCTGCCAGTACGACGGATGCCGCATTGC AATGGACCAGCTACATCAACAATCAAGTGGAACCTGCGACCAATGCCCAAGCCAATGCTCAGACCCAATTTCAAGCGGGC ATTGAAAGCAGCTGTAAAACGACGTGTTTAACCTCGCTAGGCGCAGGTCTATACCGTTATACCTTTAGCAAAACTCTGAC GGCATACCCGCAATTTTCGGGGCTCGATACCCAATACACGCCTGAGCTGACCCACAGGATTTACCTAGAACTCAAACCGT TAGCCAATAGCCCAATCGACACTCAGTTGATTAACAGCGTATACGACTTTGTTCCCGCCACGGGGCAAACCGTCGCAGCG GACATGGGCCGCAAAGTTATCGCACCTGAGCAAGCCTGTTTTCGTTGCCATAATGCCGATTTGGCCAATGCCGATACCCG CCTTTTGATGCACGGCAGTAAACGTTTTGCCTTTGAGGGCTGCGTGGTGTGTCACACGACTTATTCTGGCGATCCTGAAA CCGGTAACAGCTTAGATATGGCGACATTGACGCACCAAATCCACCAAGCTAAATATCAAGTCGTCGGCCACAAGGGACAT TTATATGACTTCTCCAATGTGACCTTTCCCGGCGACATGAAGCAGTGCCAGCAATGCCATATCGCTGGCTCAGCGGCGCA AAGCAGCAATTACAATATCCCCAGTAAAACCGCCTGCCTTGACTGCCATAAAGCGCAAATTCCCGCCGACTGGAATGGCA CTGTCGCGGGGTTATTCCATAATAGGGAGATTTTTGCCAAGCCATGGGCACTCAGCTGCAGCGGCTGTCATCCCGATAGT AATAATCCCCAAGGTGTCGGGCTATTTCACAATGCCGCAGTGAACACGGCCGCTAAACTGGCGAGCGATTACCAAGTTCA GTTACTGAGCTCGCAGCTCAGTGTTGAGACGCAAACTCTAGTCGTCACACTGCAAGTGCAGCAACTTGACCAACTTCCCG CTACTCAAGCCATGATTAAATCTTTCTGGTTAATTGCCGCGGGTGAAACCAATCACGCCAACATGCCAGTCAATAATGGC CAGCGTAAAGTGTGGGATTTATTGGCAAACGCGAGCGATGTTGCCTTAAACATCACAGCGCCGAATCAGTTAACGGTCAC TATATCTAACTTATCGACTGCTGACTTTGGCGATCTGAGCCAATCTAAGCTCTACAGTAAATTGGTGCTCTGCGCCGATA AAAACACTGGCTTTGCCGTTGACTGTAATATCGCCAATCACAATGTGAACCTTAGCGCGTTGAATACGCTCACCCTGCAA GGTCAAACGGTTACGGCAAAGGCTAAGGTCGTTGAACAAGCTTGTCGCCAATGTCATGATCAAGGCTTAGAGGACAGAGT CCTGTCGGCGCATCAGATGAGGGGAATTTTTGAGCCCACTAGCAGCTGCGGCACTTGTCATGCACCGCAAACCGCAACCG CGCTCACAGATGGGCAATGTCAAAGCTGCCACAGCAATGATGCAATCATGTATCTCAATGCAGGCATAATGCATACTCCA GGTGCCGACCAAATCAAGCCCTATCGCACCATCAACAATACCTTGAGCTACAGGGAGTTAGTGCATTCACTGCACGCGGG AACCCGTACTGTCGTCGGTTTTGGCAACCCACGCCCAGAACTCACCTACCCGAATGCTAAAAACAATTGCAGTGTTTGCC ACAGTGCAGGACAACTCGATCTTGCGGGACTGAGTGCTGAGCAATCCCTGTTAGTTGCCGCACCCGATGCGGTCAACAAT GGTCAAATTGCCGAGTATTCGCCAACCTTAGCAACCTGCGCCGCCTGTCATACACAAACAGATAGCTTAGTGGTTCATGC ACGTGGCTTTGGTGGGGTTTATCAAAGCGATGCCAGCGGAGGGCGAATTTATCAAGCGGGGCAAGAATCCTGCGCCATCT GTCACGCCGAAGGTCGCTCATCGGGTGTCGATAAGGTGCACCAATAG
Upstream 100 bases:
>100_bases CGGTTAATTAACTGCCACTCAACGCATAACTCAGTTAATATCTAAAACGCATACATTCCGATTAGAGTCCCGACAGAATC TAATTAAAAAGGAATGGAAA
Downstream 100 bases:
>100_bases GCTGGTAGATTTTATCTCGCCCAAAAACAAAACCGCTCGCAATAATGCGAGCGGTTTTATTTAATCAGGCTGATTTATCA AGCCTTGAGTCAGTGCTGAC
Product: hypothetical protein
Products: NA
Alternate protein names: Decaheme C-Type Cytochrome OmcA/MtrC Family; Decaheme Cytochrome C MtrF; DeCa-Heme C-Type Cytochrome; Deca-Heme C-Type Cytochrome; Decaheme Cytochrome C-Like Protein
Number of amino acids: Translated: 788; Mature: 788
Protein sequence:
>788_residues MMNTNTRSQWKIFTPIAVAVCLMTACSDGEEGKEGPSGIVSISIEQANTLKATIEKVAIDAQTQVQVDFFLSNANGIAVT GLENLKELDTLGLGIAKLAPPQAHYHITQATADAAAQNSAVAIGAASTTDAALQWTSYINNQVEPATNAQANAQTQFQAG IESSCKTTCLTSLGAGLYRYTFSKTLTAYPQFSGLDTQYTPELTHRIYLELKPLANSPIDTQLINSVYDFVPATGQTVAA DMGRKVIAPEQACFRCHNADLANADTRLLMHGSKRFAFEGCVVCHTTYSGDPETGNSLDMATLTHQIHQAKYQVVGHKGH LYDFSNVTFPGDMKQCQQCHIAGSAAQSSNYNIPSKTACLDCHKAQIPADWNGTVAGLFHNREIFAKPWALSCSGCHPDS NNPQGVGLFHNAAVNTAAKLASDYQVQLLSSQLSVETQTLVVTLQVQQLDQLPATQAMIKSFWLIAAGETNHANMPVNNG QRKVWDLLANASDVALNITAPNQLTVTISNLSTADFGDLSQSKLYSKLVLCADKNTGFAVDCNIANHNVNLSALNTLTLQ GQTVTAKAKVVEQACRQCHDQGLEDRVLSAHQMRGIFEPTSSCGTCHAPQTATALTDGQCQSCHSNDAIMYLNAGIMHTP GADQIKPYRTINNTLSYRELVHSLHAGTRTVVGFGNPRPELTYPNAKNNCSVCHSAGQLDLAGLSAEQSLLVAAPDAVNN GQIAEYSPTLATCAACHTQTDSLVVHARGFGGVYQSDASGGRIYQAGQESCAICHAEGRSSGVDKVHQ
Sequences:
>Translated_788_residues MMNTNTRSQWKIFTPIAVAVCLMTACSDGEEGKEGPSGIVSISIEQANTLKATIEKVAIDAQTQVQVDFFLSNANGIAVT GLENLKELDTLGLGIAKLAPPQAHYHITQATADAAAQNSAVAIGAASTTDAALQWTSYINNQVEPATNAQANAQTQFQAG IESSCKTTCLTSLGAGLYRYTFSKTLTAYPQFSGLDTQYTPELTHRIYLELKPLANSPIDTQLINSVYDFVPATGQTVAA DMGRKVIAPEQACFRCHNADLANADTRLLMHGSKRFAFEGCVVCHTTYSGDPETGNSLDMATLTHQIHQAKYQVVGHKGH LYDFSNVTFPGDMKQCQQCHIAGSAAQSSNYNIPSKTACLDCHKAQIPADWNGTVAGLFHNREIFAKPWALSCSGCHPDS NNPQGVGLFHNAAVNTAAKLASDYQVQLLSSQLSVETQTLVVTLQVQQLDQLPATQAMIKSFWLIAAGETNHANMPVNNG QRKVWDLLANASDVALNITAPNQLTVTISNLSTADFGDLSQSKLYSKLVLCADKNTGFAVDCNIANHNVNLSALNTLTLQ GQTVTAKAKVVEQACRQCHDQGLEDRVLSAHQMRGIFEPTSSCGTCHAPQTATALTDGQCQSCHSNDAIMYLNAGIMHTP GADQIKPYRTINNTLSYRELVHSLHAGTRTVVGFGNPRPELTYPNAKNNCSVCHSAGQLDLAGLSAEQSLLVAAPDAVNN GQIAEYSPTLATCAACHTQTDSLVVHARGFGGVYQSDASGGRIYQAGQESCAICHAEGRSSGVDKVHQ >Mature_788_residues MMNTNTRSQWKIFTPIAVAVCLMTACSDGEEGKEGPSGIVSISIEQANTLKATIEKVAIDAQTQVQVDFFLSNANGIAVT GLENLKELDTLGLGIAKLAPPQAHYHITQATADAAAQNSAVAIGAASTTDAALQWTSYINNQVEPATNAQANAQTQFQAG IESSCKTTCLTSLGAGLYRYTFSKTLTAYPQFSGLDTQYTPELTHRIYLELKPLANSPIDTQLINSVYDFVPATGQTVAA DMGRKVIAPEQACFRCHNADLANADTRLLMHGSKRFAFEGCVVCHTTYSGDPETGNSLDMATLTHQIHQAKYQVVGHKGH LYDFSNVTFPGDMKQCQQCHIAGSAAQSSNYNIPSKTACLDCHKAQIPADWNGTVAGLFHNREIFAKPWALSCSGCHPDS NNPQGVGLFHNAAVNTAAKLASDYQVQLLSSQLSVETQTLVVTLQVQQLDQLPATQAMIKSFWLIAAGETNHANMPVNNG QRKVWDLLANASDVALNITAPNQLTVTISNLSTADFGDLSQSKLYSKLVLCADKNTGFAVDCNIANHNVNLSALNTLTLQ GQTVTAKAKVVEQACRQCHDQGLEDRVLSAHQMRGIFEPTSSCGTCHAPQTATALTDGQCQSCHSNDAIMYLNAGIMHTP GADQIKPYRTINNTLSYRELVHSLHAGTRTVVGFGNPRPELTYPNAKNNCSVCHSAGQLDLAGLSAEQSLLVAAPDAVNN GQIAEYSPTLATCAACHTQTDSLVVHARGFGGVYQSDASGGRIYQAGQESCAICHAEGRSSGVDKVHQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 84157; Mature: 84157
Theoretical pI: Translated: 6.41; Mature: 6.41
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51008 MULTIHEME_CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMNTNTRSQWKIFTPIAVAVCLMTACSDGEEGKEGPSGIVSISIEQANTLKATIEKVAID CCCCCCCCCEEEEHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHCC AQTQVQVDFFLSNANGIAVTGLENLKELDTLGLGIAKLAPPQAHYHITQATADAAAQNSA CCCEEEEEEEEECCCCEEEECHHHHHHHHHHCCCHHHCCCCCCEEEEEEHHHHHHCCCCE VAIGAASTTDAALQWTSYINNQVEPATNAQANAQTQFQAGIESSCKTTCLTSLGAGLYRY EEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHCCHHHEE TFSKTLTAYPQFSGLDTQYTPELTHRIYLELKPLANSPIDTQLINSVYDFVPATGQTVAA HHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCHHH DMGRKVIAPEQACFRCHNADLANADTRLLMHGSKRFAFEGCVVCHTTYSGDPETGNSLDM HCCCEECCCCHHHHHHCCCCCCCCCCEEEEECCCEEEECCEEEEEEECCCCCCCCCCCHH ATLTHQIHQAKYQVVGHKGHLYDFSNVTFPGDMKQCQQCHIAGSAAQSSNYNIPSKTACL HHHHHHHHHHHEEEECCCCCEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEE DCHKAQIPADWNGTVAGLFHNREIFAKPWALSCSGCHPDSNNPQGVGLFHNAAVNTAAKL CCHHCCCCCCCCCEEEEEEECCEEEECCCEEEECCCCCCCCCCCCEEEEEHHHHHHHHHH ASDYQVQLLSSQLSVETQTLVVTLQVQQLDQLPATQAMIKSFWLIAAGETNHANMPVNNG HCCCEEEEEHHHHCEEEEEEEEEEEHHHHHCCCHHHHHHHHEEEEEECCCCCCCCCCCCC QRKVWDLLANASDVALNITAPNQLTVTISNLSTADFGDLSQSKLYSKLVLCADKNTGFAV HHHHHHHHCCCCCEEEEEECCCEEEEEEECCCCCCCCCCHHHHHHEEEEEEECCCCCEEE DCNIANHNVNLSALNTLTLQGQTVTAKAKVVEQACRQCHDQGLEDRVLSAHQMRGIFEPT EEEEECCCEEEEEEEEEEECCCEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCC SSCGTCHAPQTATALTDGQCQSCHSNDAIMYLNAGIMHTPGADQIKPYRTINNTLSYREL CCCCCCCCCCCCCEECCCCCCCCCCCCEEEEEECCEEECCCCCCCCCHHHHHHHHHHHHH VHSLHAGTRTVVGFGNPRPELTYPNAKNNCSVCHSAGQLDLAGLSAEQSLLVAAPDAVNN HHHHHCCCEEEEECCCCCCCEECCCCCCCCHHHHCCCCEEEECCCCCCEEEEECCCCCCC GQIAEYSPTLATCAACHTQTDSLVVHARGFGGVYQSDASGGRIYQAGQESCAICHAEGRS CEEEECCCHHHHHHHHCCCCCCEEEEECCCCCEECCCCCCCEEEECCCCCEEEEECCCCC SGVDKVHQ CCCHHHCC >Mature Secondary Structure MMNTNTRSQWKIFTPIAVAVCLMTACSDGEEGKEGPSGIVSISIEQANTLKATIEKVAID CCCCCCCCCEEEEHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHCC AQTQVQVDFFLSNANGIAVTGLENLKELDTLGLGIAKLAPPQAHYHITQATADAAAQNSA CCCEEEEEEEEECCCCEEEECHHHHHHHHHHCCCHHHCCCCCCEEEEEEHHHHHHCCCCE VAIGAASTTDAALQWTSYINNQVEPATNAQANAQTQFQAGIESSCKTTCLTSLGAGLYRY EEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHCCHHHEE TFSKTLTAYPQFSGLDTQYTPELTHRIYLELKPLANSPIDTQLINSVYDFVPATGQTVAA HHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCHHH DMGRKVIAPEQACFRCHNADLANADTRLLMHGSKRFAFEGCVVCHTTYSGDPETGNSLDM HCCCEECCCCHHHHHHCCCCCCCCCCEEEEECCCEEEECCEEEEEEECCCCCCCCCCCHH ATLTHQIHQAKYQVVGHKGHLYDFSNVTFPGDMKQCQQCHIAGSAAQSSNYNIPSKTACL HHHHHHHHHHHEEEECCCCCEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEE DCHKAQIPADWNGTVAGLFHNREIFAKPWALSCSGCHPDSNNPQGVGLFHNAAVNTAAKL CCHHCCCCCCCCCEEEEEEECCEEEECCCEEEECCCCCCCCCCCCEEEEEHHHHHHHHHH ASDYQVQLLSSQLSVETQTLVVTLQVQQLDQLPATQAMIKSFWLIAAGETNHANMPVNNG HCCCEEEEEHHHHCEEEEEEEEEEEHHHHHCCCHHHHHHHHEEEEEECCCCCCCCCCCCC QRKVWDLLANASDVALNITAPNQLTVTISNLSTADFGDLSQSKLYSKLVLCADKNTGFAV HHHHHHHHCCCCCEEEEEECCCEEEEEEECCCCCCCCCCHHHHHHEEEEEEECCCCCEEE DCNIANHNVNLSALNTLTLQGQTVTAKAKVVEQACRQCHDQGLEDRVLSAHQMRGIFEPT EEEEECCCEEEEEEEEEEECCCEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCC SSCGTCHAPQTATALTDGQCQSCHSNDAIMYLNAGIMHTPGADQIKPYRTINNTLSYREL CCCCCCCCCCCCCEECCCCCCCCCCCCEEEEEECCEEECCCCCCCCCHHHHHHHHHHHHH VHSLHAGTRTVVGFGNPRPELTYPNAKNNCSVCHSAGQLDLAGLSAEQSLLVAAPDAVNN HHHHHCCCEEEEECCCCCCCEECCCCCCCCHHHHCCCCEEEECCCCCCEEEEECCCCCCC GQIAEYSPTLATCAACHTQTDSLVVHARGFGGVYQSDASGGRIYQAGQESCAICHAEGRS CEEEECCCHHHHHHHHCCCCCCEEEEECCCCCEECCCCCCCEEEECCCCCEEEEECCCCC SGVDKVHQ CCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA