Definition Shewanella baltica OS195 chromosome, complete genome.
Accession NC_009997
Length 5,347,283

Click here to switch to the map view.

The map label for this gene is ypwA [H]

Identifier: 160876361

GI number: 160876361

Start: 3830605

End: 3832110

Strand: Direct

Name: ypwA [H]

Synonym: Sbal195_3255

Alternate gene names: 160876361

Gene position: 3830605-3832110 (Clockwise)

Preceding gene: 160876357

Following gene: 160876362

Centisome position: 71.64

GC content: 51.86

Gene sequence:

>1506_bases
ATGGGCACACCTAAGACTAAAGTACCAACGCCAAGTTACGACAAACTGACGGCACATTTCCAGAAAATTTCTCACTTTGA
ACATTTCAGCGCTTTGGCTGACTGGGATCAAGCGGCCATGATGCCGATGGGCGGTGGTCCAGATCGCGGCGATGCAATGG
CAGAACTGGCGCTGCATATCCACGGTCTCAAAACCTCAGACACCTTAGCCGAGCACTTACACTGCGCGGCGGACGAATCT
CTCTCAACAGAGCAAGAAGCCAATCTGCGGGCAATACTGTACCAGTATCAACAGGCCAACTTAGTGCCAGGCGACCTAGT
ACAAGCCAAAACCAAGATGGCCTATCAATGTGAGAATGCGTGGCGCGAGCAGCGTAAAAATAATGATTGGCTGGGCTTTA
AGCCCAATCTAAAAGCGGTCATCGACCTTGCCAAGGAAGAAGCGCAGATCCGCGGCGAAGCGCAAAATATCACGCCCTAT
GATGCCCTGCTCAATAAATTTGAACCGGGAATGACCACGGCAAAGCTAGAGCAAACCTTTGGCGGCCTGAAAGATTGGCT
ACCGACACTCATCCAAGAAGTGCTGACTAAGCAGGCAAACGAGCCTAAGCTTGTGCTCAACGGCCCCTTCGATATCAGCG
CGCAGCAAGCCCTTGGCCGTGACGTCATGGCGTTTTTGGGGTTTGACTTTAATCATGGCAGGCTGGATATGAGTAGCCAT
CCATTTTGTGGCGGCGTGCCAAGCGATGTGCGGATAACGACCCGCTACAATGAGGCCGATTTCAGTAGCGCTATCATGGG
CATAGTTCATGAAACTGGCCACGCCAGATACGAGCAAGGTTTACCTCAAGCGTGGCGCGGCCAACCCGCTGGGCTTGCAC
GTTCTATGGGCGTCCACGAAAGCCAAAGTCTATTTTGCGAAATGCAGCTTGGGGCAAATCCGGCATTTTTACGCCAGTTG
CAGCCTAAAATCGCGCAGCATCTTAACTGTCATGTCAGCGCCCAAGAATTAGCCCAGCATTATACCCGCGTGAATCCCGG
ACTTATTCGCGTCGACGCCGACGAAGTCACCTATCCTTGCCACATTTTGCTGCGGTTTGAGGCAGAAAAAGCCTTTGTCG
ATGGCAGCTTAACCGTCGATGATTTACCTGATTTTTGGTCGACGCAGATGCAACAATTACTGGGGATCAATACTGATGGC
AATTACCGCGACGGTTGCATGCAGGACATCCATTGGGCTGTCGGTGAGCTAGGGTATTTCCCAAGTTACACCTTAGGCGC
CATGTATGCCGCCCAATGTCGTTTTGCGATGGAAAAAGCCTTAGGGCCGATTGAAGCCCTAATCGATGCAGGCAAGTTGG
ACTCGGTATTCCAGTGGCTGCGCGAGCACATTTGGTCAAAGGGATCCTTGCTCACGACCGATGAACTGATCCGCCAAGCA
ACGGGCGAAACCTTAAATGGTCAATATCTTGAGCGTCACCTGCGTCAACGATATCTGGGCATTTAA

Upstream 100 bases:

>100_bases
CCTTTAGCGTTTTAGTGCTATATGATTTTGACTTCATTGTATTATCATCCTGTTATTGTTATTTATTCGCGCAGGTTTTA
TGCGCCAGAAGGGAAATCCC

Downstream 100 bases:

>100_bases
CCGCTGCTGACACATAAAAGCACTGAAAGCTCAGTTTATACGGGTTTTAAAGCGCTTTATATTGCCGCTGGAGCCTGCAT
TTTGAAGCCGCTTGAGGTTA

Product: carboxypeptidase Taq

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 501; Mature: 500

Protein sequence:

>501_residues
MGTPKTKVPTPSYDKLTAHFQKISHFEHFSALADWDQAAMMPMGGGPDRGDAMAELALHIHGLKTSDTLAEHLHCAADES
LSTEQEANLRAILYQYQQANLVPGDLVQAKTKMAYQCENAWREQRKNNDWLGFKPNLKAVIDLAKEEAQIRGEAQNITPY
DALLNKFEPGMTTAKLEQTFGGLKDWLPTLIQEVLTKQANEPKLVLNGPFDISAQQALGRDVMAFLGFDFNHGRLDMSSH
PFCGGVPSDVRITTRYNEADFSSAIMGIVHETGHARYEQGLPQAWRGQPAGLARSMGVHESQSLFCEMQLGANPAFLRQL
QPKIAQHLNCHVSAQELAQHYTRVNPGLIRVDADEVTYPCHILLRFEAEKAFVDGSLTVDDLPDFWSTQMQQLLGINTDG
NYRDGCMQDIHWAVGELGYFPSYTLGAMYAAQCRFAMEKALGPIEALIDAGKLDSVFQWLREHIWSKGSLLTTDELIRQA
TGETLNGQYLERHLRQRYLGI

Sequences:

>Translated_501_residues
MGTPKTKVPTPSYDKLTAHFQKISHFEHFSALADWDQAAMMPMGGGPDRGDAMAELALHIHGLKTSDTLAEHLHCAADES
LSTEQEANLRAILYQYQQANLVPGDLVQAKTKMAYQCENAWREQRKNNDWLGFKPNLKAVIDLAKEEAQIRGEAQNITPY
DALLNKFEPGMTTAKLEQTFGGLKDWLPTLIQEVLTKQANEPKLVLNGPFDISAQQALGRDVMAFLGFDFNHGRLDMSSH
PFCGGVPSDVRITTRYNEADFSSAIMGIVHETGHARYEQGLPQAWRGQPAGLARSMGVHESQSLFCEMQLGANPAFLRQL
QPKIAQHLNCHVSAQELAQHYTRVNPGLIRVDADEVTYPCHILLRFEAEKAFVDGSLTVDDLPDFWSTQMQQLLGINTDG
NYRDGCMQDIHWAVGELGYFPSYTLGAMYAAQCRFAMEKALGPIEALIDAGKLDSVFQWLREHIWSKGSLLTTDELIRQA
TGETLNGQYLERHLRQRYLGI
>Mature_500_residues
GTPKTKVPTPSYDKLTAHFQKISHFEHFSALADWDQAAMMPMGGGPDRGDAMAELALHIHGLKTSDTLAEHLHCAADESL
STEQEANLRAILYQYQQANLVPGDLVQAKTKMAYQCENAWREQRKNNDWLGFKPNLKAVIDLAKEEAQIRGEAQNITPYD
ALLNKFEPGMTTAKLEQTFGGLKDWLPTLIQEVLTKQANEPKLVLNGPFDISAQQALGRDVMAFLGFDFNHGRLDMSSHP
FCGGVPSDVRITTRYNEADFSSAIMGIVHETGHARYEQGLPQAWRGQPAGLARSMGVHESQSLFCEMQLGANPAFLRQLQ
PKIAQHLNCHVSAQELAQHYTRVNPGLIRVDADEVTYPCHILLRFEAEKAFVDGSLTVDDLPDFWSTQMQQLLGINTDGN
YRDGCMQDIHWAVGELGYFPSYTLGAMYAAQCRFAMEKALGPIEALIDAGKLDSVFQWLREHIWSKGSLLTTDELIRQAT
GETLNGQYLERHLRQRYLGI

Specific function: Unknown

COG id: COG2317

COG function: function code E; Zn-dependent carboxypeptidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M32 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001333 [H]

Pfam domain/function: PF02074 Peptidase_M32 [H]

EC number: NA

Molecular weight: Translated: 56035; Mature: 55904

Theoretical pI: Translated: 5.78; Mature: 5.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTPKTKVPTPSYDKLTAHFQKISHFEHFSALADWDQAAMMPMGGGPDRGDAMAELALHI
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCHHHHHHHHHHH
HGLKTSDTLAEHLHCAADESLSTEQEANLRAILYQYQQANLVPGDLVQAKTKMAYQCENA
CCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
WREQRKNNDWLGFKPNLKAVIDLAKEEAQIRGEAQNITPYDALLNKFEPGMTTAKLEQTF
HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCHHHHHHHHH
GGLKDWLPTLIQEVLTKQANEPKLVLNGPFDISAQQALGRDVMAFLGFDFNHGRLDMSSH
CHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEECCCCC
PFCGGVPSDVRITTRYNEADFSSAIMGIVHETGHARYEQGLPQAWRGQPAGLARSMGVHE
CCCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCHHHHHCCCHHHCCCCCHHHHHCCCCC
SQSLFCEMQLGANPAFLRQLQPKIAQHLNCHVSAQELAQHYTRVNPGLIRVDADEVTYPC
CCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCE
HILLRFEAEKAFVDGSLTVDDLPDFWSTQMQQLLGINTDGNYRDGCMQDIHWAVGELGYF
EEEEEEECCHHEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCC
PSYTLGAMYAAQCRFAMEKALGPIEALIDAGKLDSVFQWLREHIWSKGSLLTTDELIRQA
CCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHCCCCCEECHHHHHHHH
TGETLNGQYLERHLRQRYLGI
CCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GTPKTKVPTPSYDKLTAHFQKISHFEHFSALADWDQAAMMPMGGGPDRGDAMAELALHI
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCHHHHHHHHHHH
HGLKTSDTLAEHLHCAADESLSTEQEANLRAILYQYQQANLVPGDLVQAKTKMAYQCENA
CCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
WREQRKNNDWLGFKPNLKAVIDLAKEEAQIRGEAQNITPYDALLNKFEPGMTTAKLEQTF
HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCHHHHHHHHH
GGLKDWLPTLIQEVLTKQANEPKLVLNGPFDISAQQALGRDVMAFLGFDFNHGRLDMSSH
CHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEECCCCC
PFCGGVPSDVRITTRYNEADFSSAIMGIVHETGHARYEQGLPQAWRGQPAGLARSMGVHE
CCCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCHHHHHCCCHHHCCCCCHHHHHCCCCC
SQSLFCEMQLGANPAFLRQLQPKIAQHLNCHVSAQELAQHYTRVNPGLIRVDADEVTYPC
CCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCE
HILLRFEAEKAFVDGSLTVDDLPDFWSTQMQQLLGINTDGNYRDGCMQDIHWAVGELGYF
EEEEEEECCHHEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCC
PSYTLGAMYAAQCRFAMEKALGPIEALIDAGKLDSVFQWLREHIWSKGSLLTTDELIRQA
CCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHCCCCCEECHHHHHHHH
TGETLNGQYLERHLRQRYLGI
CCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]